FFCP PHASE1:Hg19::chr12:56732704..56732721,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51561 | |EntrezGene=51561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15488 | |HGNC=15488 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPF7 | |UniProt=Q9NPF7 | ||
|association_with_transcript=41bp_to_ENST00000228534,NM_016584,uc001sla.2_5end | |association_with_transcript=41bp_to_ENST00000228534,NM_016584,uc001sla.2_5end | ||
|cluster_id=chr12:56732704..56732721,+ | |||
|description=CAGE_peak_3_at_IL23A_5end | |description=CAGE_peak_3_at_IL23A_5end | ||
|id=chr12:56732704..56732721,+ | |id=chr12:56732704..56732721,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.36e-23!140;CL:0000838!4.87e-22!52;CL:0000542!2.20e-21!53;CL:0000051!2.20e-21!53;CL:0000791!2.22e-20!18;CL:0000789!2.22e-20!18;CL:0002420!2.22e-20!18;CL:0002419!2.22e-20!18;CL:0000790!2.22e-20!18;CL:0002087!6.84e-20!119;CL:0002031!3.92e-18!124;CL:0000084!3.40e-17!25;CL:0000827!3.40e-17!25;CL:0000037!6.07e-15!172;CL:0000566!6.07e-15!172;CL:0000625!1.29e-14!11;CL:0000988!4.93e-13!182;CL:0002032!6.29e-13!165;CL:0000837!6.29e-13!165;CL:0000236!3.58e-10!14;CL:0000624!5.72e-09!6 | |ontology_enrichment_celltype=CL:0000738!3.36e-23!140;CL:0000838!4.87e-22!52;CL:0000542!2.20e-21!53;CL:0000051!2.20e-21!53;CL:0000791!2.22e-20!18;CL:0000789!2.22e-20!18;CL:0002420!2.22e-20!18;CL:0002419!2.22e-20!18;CL:0000790!2.22e-20!18;CL:0002087!6.84e-20!119;CL:0002031!3.92e-18!124;CL:0000084!3.40e-17!25;CL:0000827!3.40e-17!25;CL:0000037!6.07e-15!172;CL:0000566!6.07e-15!172;CL:0000625!1.29e-14!11;CL:0000988!4.93e-13!182;CL:0002032!6.29e-13!165;CL:0000837!6.29e-13!165;CL:0000236!3.58e-10!14;CL:0000624!5.72e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.68e-33;18!CL:0000789;4.68e-33;18!CL:0002419;4.68e-33;18!CL:0000625;3.58e-23;11!CL:0000084;2.44e-22;25!CL:0000542;1.57e-14;53!CL:0000624;9.55e-14;6!CL:0000236;1.08e-08;13!CL:0000898;8.29e-08;3!CL:0002087;1.50e-07;104 | |ontology_enrichment_celltype_v019=CL:0000791;4.68e-33;18!CL:0000789;4.68e-33;18!CL:0002419;4.68e-33;18!CL:0000625;3.58e-23;11!CL:0000084;2.44e-22;25!CL:0000542;1.57e-14;53!CL:0000624;9.55e-14;6!CL:0000236;1.08e-08;13!CL:0000898;8.29e-08;3!CL:0002087;1.50e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.61e-33,18;CL:0000789,3.61e-33,18;CL:0002420,3.61e-33,18;CL:0002419,3.61e-33,18;CL:0000790,3.61e-33,18;CL:0000838,4.17e-25,52;CL:0000542,1.80e-24,53;CL:0000051,1.80e-24,53;CL:0000625,3.33e-23,11;CL:0000084,2.04e-22,25;CL:0000827,2.04e-22,25;CL:0002087,4.82e-19,115;CL:0000738,1.80e-17,136;CL:0002031,1.04e-15,120;CL:0000624,7.78e-14,6;CL:0000037,5.95e-12,168;CL:0000988,8.75e-11,177;CL:0002032,1.27e-10,161;CL:0000837,1.27e-10,161;CL:0000236,3.48e-08,14;CL:0000898,7.81e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.68e-33;18!CL:0000051;1.57e-14;53 | |ontology_enrichment_development_v019=CL:0000790;4.68e-33;18!CL:0000051;1.57e-14;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.42e-08!15;UBERON:0000179!1.42e-08!15;UBERON:0000463!1.42e-08!15;UBERON:0002193!2.75e-08!112;UBERON:0002390!7.93e-08!102;UBERON:0003061!7.93e-08!102 | |ontology_enrichment_uberon=UBERON:0000178!1.42e-08!15;UBERON:0000179!1.42e-08!15;UBERON:0000463!1.42e-08!15;UBERON:0002193!2.75e-08!112;UBERON:0002390!7.93e-08!102;UBERON:0003061!7.93e-08!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.71e-14;15!UBERON:0000179;5.71e-14;15!UBERON:0000463;5.71e-14;15!UBERON:0002390;8.59e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;5.71e-14;15!UBERON:0000179;5.71e-14;15!UBERON:0000463;5.71e-14;15!UBERON:0002390;8.59e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.35e-14,15;UBERON:0000179,3.35e-14,15;UBERON:0000463,3.35e-14,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,1.18009283054671,0.383829398097213,0.619264493264304,0,0,0,0,0,0,1.10799081706375,1.40381113229099,1.30206522429511,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0,0.689491361473237,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,1.7412554317715,1.13477044938228,3.73693349397345,0,0,0.217188844705117,1.21079900526674,4.05105399586321,4.1140110367315,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,2.73069305631066,3.55803701545422,0,1.60158394814405,2.87376219977242,2.64417949113945,1.90810750907073,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,0,4.52432471261816,6.6811829667358,2.87842098599313,7.02183280640848,5.21475626613745,7.57516489175573,3.89653456815823,6.57321695622524,3.82987679717288,2.21533894583621,4.87446954777028,3.5865569523189,3.38154303655683,3.12432018746985,1.65810010671509,2.31842468588042,3.26230438956533,4.54819407752512,6.27213142829861,3.28597093822942,6.51474839123266,5.15441168223945,5.31341353240956,8.28270077242652,5.85975108470777,4.75226022224187,6.17357988218868,5.50342427963999,3.74792179657038,5.91943130110042,5.74789597844733,1.81446068902259,1.06976078313403,3.18613688542158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,2.01414658554573,0,0.24406205754817,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.573609190778008,1.21973706129595,0.265059536642971,1.97529702878181,1.0366105501537,1.00928340350251,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.703702806881416,0,0,0,0,0,0,0.577465791044295,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0.671928512795438,0.567100388969546,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.94064817373566,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.72571360654893,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0,3.60959690325929,0.693138033939733,0,1.46139224653261,0,0,0,0,0,0,0,1.78413391131527,0.831076008928724,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0.86101074534246,0,0,0.229723400206959,1.52234282769651,4.58782324285425,1.70894156152249,2.1440859791201,2.05681136543097,0,1.62009431171434,2.37937552888281,0,0,0.245040215981032,0,0,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0.269605053441981,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.441280633457501,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,1.44677833618517,1.51293380256957,0.83088067605837,2.4747128070665,0.77380195455795,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.988058159489721,0,1.27668251554036,0,0,0,0,15.7054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0.163565394255844,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,1.56597604516909,1.86485443868962,0,0,0,0,0.971421986118279,1.63757624423474,0,0,14.5700445830258,0,1.05673990496671,0.0771741581079447,0,15.5204707799303,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0.199882311849858,0,0,0.160482733378337,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,8.97501701729439,3.74104367371785,2.75684698604535,3.76061308938563,0,0,0,0,0,0,1.22718928688412,1.55186785739645,0,0,0,0,0,0.5388164241167,0.358611026963382,0,1.05824249194267,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0,1.18009283054671,0.383829398097213,0.619264493264304,0,0,0,0,0,0,1.10799081706375,1.40381113229099,1.30206522429511,0,0,0,0,0,0.242584061187816,0.232429036905685,0.411167888021826,0.929119112685311,0,0,0,0.689491361473237,0,1.35426486594342,0,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0,0,0,1.7412554317715,1.13477044938228,3.73693349397345,0,0,0.217188844705117,1.21079900526674,4.05105399586321,4.1140110367315,0,0,0,0.112328631146495,0,0,0,0,0,1.75996244461323,2.73069305631066,3.55803701545422,0,1.60158394814405,2.87376219977242,2.64417949113945,1.90810750907073,0.569212969109448,0.587237189370939,0.382273228125229,1.32171328579026,0.560508562981536,0,4.52432471261816,6.6811829667358,2.87842098599313,7.02183280640848,5.21475626613745,7.57516489175573,3.89653456815823,6.57321695622524,3.82987679717288,2.21533894583621,4.87446954777028,3.5865569523189,3.38154303655683,3.12432018746985,1.65810010671509,2.31842468588042,3.26230438956533,4.54819407752512,6.27213142829861,3.28597093822942,6.51474839123266,5.15441168223945,5.31341353240956,8.28270077242652,5.85975108470777,4.75226022224187,6.17357988218868,5.50342427963999,3.74792179657038,5.91943130110042,5.74789597844733,1.81446068902259,1.06976078313403,3.18613688542158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,2.01414658554573,0,0.24406205754817,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0.573609190778008,1.21973706129595,0.265059536642971,1.97529702878181,1.0366105501537,1.00928340350251,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0.703702806881416,0,0,0,0,0,0,0.577465791044295,0,0.380508304469197,0,0,0,0,0,0.93733833986777,0.671928512795438,0.567100388969546,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.94064817373566,1.02674429023799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.72571360654893,1.70764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0,0,0,0,3.60959690325929,0.693138033939733,0,1.46139224653261,0,0,0,0,0,0,0,1.78413391131527,0.831076008928724,1.11937377361089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.188287601553558,0.86101074534246,0,0,0.229723400206959,1.52234282769651,4.58782324285425,1.70894156152249,2.1440859791201,2.05681136543097,0,1.62009431171434,2.37937552888281,0,0,0.245040215981032,0,0,0.213425530045242,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0.269605053441981,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,1.27718352450966,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0.0979923974143777,0,0,0,0,0,0,0,0.441280633457501,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0.288109595976299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0,0,0,0,0,1.44677833618517,1.51293380256957,0.83088067605837,2.4747128070665,0.77380195455795,0,0,0,0,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0.988058159489721,0,1.27668251554036,0,0,0,0,15.7054096250234,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,1.30428925749743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.584580926518165,0,0.163565394255844,0,0,0.211312123358627,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0.887136517302272,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,1.56597604516909,1.86485443868962,0,0,0,0,0.971421986118279,1.63757624423474,0,0,14.5700445830258,0,1.05673990496671,0.0771741581079447,0,15.5204707799303,0,0,0,0,0,0,0.375935671919414,0.128915775947154,0.199882311849858,0,0,0.160482733378337,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,8.97501701729439,3.74104367371785,2.75684698604535,3.76061308938563,0,0,0,0,0,0,1.22718928688412,1.55186785739645,0,0,0,0,0,0.5388164241167,0.358611026963382,0,1.05824249194267,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@IL23A | |short_description=p3@IL23A | ||
}} | }} |
Latest revision as of 10:54, 19 September 2015
Short description: | p3@IL23A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL23A_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000228534, NM_016584, uc001sla.2_5end |
EntrezGene: | IL23A |
HGNC: | 15488 |
UniProt: | Q9NPF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.61e-33 | 18 |
alpha-beta T cell | 3.61e-33 | 18 |
immature T cell | 3.61e-33 | 18 |
mature T cell | 3.61e-33 | 18 |
immature alpha-beta T cell | 3.61e-33 | 18 |
lymphoid lineage restricted progenitor cell | 4.17e-25 | 52 |
lymphocyte | 1.80e-24 | 53 |
common lymphoid progenitor | 1.80e-24 | 53 |
CD8-positive, alpha-beta T cell | 3.33e-23 | 11 |
T cell | 2.04e-22 | 25 |
pro-T cell | 2.04e-22 | 25 |
nongranular leukocyte | 4.82e-19 | 115 |
leukocyte | 1.80e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.04e-15 | 120 |
CD4-positive, alpha-beta T cell | 7.78e-14 | 6 |
hematopoietic stem cell | 5.95e-12 | 168 |
hematopoietic cell | 8.75e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.27e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-10 | 161 |
B cell | 3.48e-08 | 14 |
naive T cell | 7.81e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.35e-14 | 15 |
haemolymphatic fluid | 3.35e-14 | 15 |
organism substance | 3.35e-14 | 15 |