FFCP PHASE1:Hg19::chr12:56732704..56732721,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51561 | |EntrezGene=51561 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15488 | |HGNC=15488 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NPF7 | |UniProt=Q9NPF7 | ||
|association_with_transcript=41bp_to_ENST00000228534,NM_016584,uc001sla.2_5end | |association_with_transcript=41bp_to_ENST00000228534,NM_016584,uc001sla.2_5end | ||
|cluster_id=chr12:56732704..56732721,+ | |||
|description=CAGE_peak_3_at_IL23A_5end | |description=CAGE_peak_3_at_IL23A_5end | ||
|id=chr12:56732704..56732721,+ | |id=chr12:56732704..56732721,+ | ||
|ontology_enrichment_celltype=CL:0000738!3.36e-23!140;CL:0000838!4.87e-22!52;CL:0000542!2.20e-21!53;CL:0000051!2.20e-21!53;CL:0000791!2.22e-20!18;CL:0000789!2.22e-20!18;CL:0002420!2.22e-20!18;CL:0002419!2.22e-20!18;CL:0000790!2.22e-20!18;CL:0002087!6.84e-20!119;CL:0002031!3.92e-18!124;CL:0000084!3.40e-17!25;CL:0000827!3.40e-17!25;CL:0000037!6.07e-15!172;CL:0000566!6.07e-15!172;CL:0000625!1.29e-14!11;CL:0000988!4.93e-13!182;CL:0002032!6.29e-13!165;CL:0000837!6.29e-13!165;CL:0000236!3.58e-10!14;CL:0000624!5.72e-09!6 | |ontology_enrichment_celltype=CL:0000738!3.36e-23!140;CL:0000838!4.87e-22!52;CL:0000542!2.20e-21!53;CL:0000051!2.20e-21!53;CL:0000791!2.22e-20!18;CL:0000789!2.22e-20!18;CL:0002420!2.22e-20!18;CL:0002419!2.22e-20!18;CL:0000790!2.22e-20!18;CL:0002087!6.84e-20!119;CL:0002031!3.92e-18!124;CL:0000084!3.40e-17!25;CL:0000827!3.40e-17!25;CL:0000037!6.07e-15!172;CL:0000566!6.07e-15!172;CL:0000625!1.29e-14!11;CL:0000988!4.93e-13!182;CL:0002032!6.29e-13!165;CL:0000837!6.29e-13!165;CL:0000236!3.58e-10!14;CL:0000624!5.72e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.68e-33;18!CL:0000789;4.68e-33;18!CL:0002419;4.68e-33;18!CL:0000625;3.58e-23;11!CL:0000084;2.44e-22;25!CL:0000542;1.57e-14;53!CL:0000624;9.55e-14;6!CL:0000236;1.08e-08;13!CL:0000898;8.29e-08;3!CL:0002087;1.50e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.61e-33,18;CL:0000789,3.61e-33,18;CL:0002420,3.61e-33,18;CL:0002419,3.61e-33,18;CL:0000790,3.61e-33,18;CL:0000838,4.17e-25,52;CL:0000542,1.80e-24,53;CL:0000051,1.80e-24,53;CL:0000625,3.33e-23,11;CL:0000084,2.04e-22,25;CL:0000827,2.04e-22,25;CL:0002087,4.82e-19,115;CL:0000738,1.80e-17,136;CL:0002031,1.04e-15,120;CL:0000624,7.78e-14,6;CL:0000037,5.95e-12,168;CL:0000988,8.75e-11,177;CL:0002032,1.27e-10,161;CL:0000837,1.27e-10,161;CL:0000236,3.48e-08,14;CL:0000898,7.81e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.68e-33;18!CL:0000051;1.57e-14;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.42e-08!15;UBERON:0000179!1.42e-08!15;UBERON:0000463!1.42e-08!15;UBERON:0002193!2.75e-08!112;UBERON:0002390!7.93e-08!102;UBERON:0003061!7.93e-08!102 | |ontology_enrichment_uberon=UBERON:0000178!1.42e-08!15;UBERON:0000179!1.42e-08!15;UBERON:0000463!1.42e-08!15;UBERON:0002193!2.75e-08!112;UBERON:0002390!7.93e-08!102;UBERON:0003061!7.93e-08!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.71e-14;15!UBERON:0000179;5.71e-14;15!UBERON:0000463;5.71e-14;15!UBERON:0002390;8.59e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.35e-14,15;UBERON:0000179,3.35e-14,15;UBERON:0000463,3.35e-14,15 | |||
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| ||
|short_description=p3@IL23A | |short_description=p3@IL23A | ||
}} | }} |
Latest revision as of 10:54, 19 September 2015
Short description: | p3@IL23A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IL23A_5end |
Coexpression cluster: | NA |
Association with transcript: | 41bp_to_ENST00000228534, NM_016584, uc001sla.2_5end |
EntrezGene: | IL23A |
HGNC: | 15488 |
UniProt: | Q9NPF7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.61e-33 | 18 |
alpha-beta T cell | 3.61e-33 | 18 |
immature T cell | 3.61e-33 | 18 |
mature T cell | 3.61e-33 | 18 |
immature alpha-beta T cell | 3.61e-33 | 18 |
lymphoid lineage restricted progenitor cell | 4.17e-25 | 52 |
lymphocyte | 1.80e-24 | 53 |
common lymphoid progenitor | 1.80e-24 | 53 |
CD8-positive, alpha-beta T cell | 3.33e-23 | 11 |
T cell | 2.04e-22 | 25 |
pro-T cell | 2.04e-22 | 25 |
nongranular leukocyte | 4.82e-19 | 115 |
leukocyte | 1.80e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 1.04e-15 | 120 |
CD4-positive, alpha-beta T cell | 7.78e-14 | 6 |
hematopoietic stem cell | 5.95e-12 | 168 |
hematopoietic cell | 8.75e-11 | 177 |
hematopoietic oligopotent progenitor cell | 1.27e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-10 | 161 |
B cell | 3.48e-08 | 14 |
naive T cell | 7.81e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 3.35e-14 | 15 |
haemolymphatic fluid | 3.35e-14 | 15 |
organism substance | 3.35e-14 | 15 |