FFCP PHASE1:Hg19::chr14:23887510..23887541,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100126336 | |EntrezGene=100126336 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=33669 | |HGNC=33669 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-238bp_to_NR_030624_5end | |association_with_transcript=-238bp_to_NR_030624_5end | ||
|cluster_id=chr14:23887510..23887541,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_1_at_MIR208B_5end | |description=CAGE_peak_1_at_MIR208B_5end | ||
|id=chr14:23887510..23887541,- | |id=chr14:23887510..23887541,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.53e-21;1!UBERON:0000358;4.67e-21;1!UBERON:0004874;4.67e-21;1 | |||
|ontology_enrichment_disease=DOID:114!5.58e-25!2;DOID:178!2.62e-13!1;DOID:326!2.62e-13!1;DOID:3978!2.62e-13!1;DOID:3394!2.62e-13!1;DOID:5844!2.62e-13!1;DOID:1287!5.39e-13!4 | |ontology_enrichment_disease=DOID:114!5.58e-25!2;DOID:178!2.62e-13!1;DOID:326!2.62e-13!1;DOID:3978!2.62e-13!1;DOID:3394!2.62e-13!1;DOID:5844!2.62e-13!1;DOID:1287!5.39e-13!4 | ||
|ontology_enrichment_disease_v019=DOID:114;1.22e-40;2!DOID:178;4.67e-21;1!DOID:326;4.67e-21;1!DOID:3978;4.67e-21;1!DOID:3394;4.67e-21;1!DOID:5844;4.67e-21;1!DOID:1287;6.65e-21;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,8.98e-41,2;DOID:178,3.45e-21,1;DOID:326,3.45e-21,1;DOID:3978,3.45e-21,1;DOID:3394,3.45e-21,1;DOID:5844,3.45e-21,1;DOID:1287,5.72e-21,4 | |||
|ontology_enrichment_uberon=UBERON:0001630!1.45e-24!2;UBERON:0005090!1.45e-24!2;UBERON:0007100!7.26e-21!27;UBERON:0003978!1.61e-16!3;UBERON:0009751!1.61e-16!3;UBERON:0000946!1.61e-16!3;UBERON:0002523!1.61e-16!3;UBERON:0005983!1.61e-16!3;UBERON:0002165!1.61e-16!3;UBERON:0002062!1.61e-16!3;UBERON:0007280!1.61e-16!3;UBERON:0001723!2.38e-16!3;UBERON:0001033!2.38e-16!3;UBERON:0010056!2.38e-16!3;UBERON:0003103!1.02e-15!69;UBERON:0002084!1.61e-13!1;UBERON:0002082!1.61e-13!1;UBERON:0004706!1.61e-13!1;UBERON:0002426!2.06e-13!1;UBERON:0003831!2.06e-13!1;UBERON:0003898!2.06e-13!1;UBERON:0004830!2.06e-13!1;UBERON:0001774!2.06e-13!1;UBERON:0003830!2.06e-13!1;UBERON:0005175!2.06e-13!1;UBERON:0003897!2.06e-13!1;UBERON:0001103!2.06e-13!1;UBERON:0010084!2.06e-13!1;UBERON:0000989!2.95e-13!1;UBERON:0008811!2.95e-13!1;UBERON:0006258!2.95e-13!1;UBERON:0005876!2.95e-13!1;UBERON:0004874!2.95e-13!1;UBERON:0002146!3.76e-13!1;UBERON:0005623!3.76e-13!1;UBERON:0007023!3.95e-13!115;UBERON:0005418!6.06e-13!1;UBERON:0001389!6.06e-13!1;UBERON:0000026!6.06e-13!1;UBERON:0008784!6.06e-13!1;UBERON:0006058!6.06e-13!1;UBERON:0003663!6.06e-13!1;UBERON:0001383!6.06e-13!1;UBERON:0004256!6.06e-13!1;UBERON:0002529!6.06e-13!1;UBERON:0004708!6.06e-13!1;UBERON:0002101!6.06e-13!1;UBERON:0004709!6.06e-13!1;UBERON:0003661!6.06e-13!1;UBERON:0002471!6.06e-13!1;UBERON:0004357!6.06e-13!1;UBERON:0009872!6.06e-13!1;UBERON:0004347!6.06e-13!1;UBERON:0005420!6.06e-13!1;UBERON:0005732!6.06e-13!1;UBERON:0006057!6.06e-13!1;UBERON:0000978!6.06e-13!1;UBERON:0002103!6.06e-13!1;UBERON:0001665!6.06e-13!1;UBERON:0003823!6.06e-13!1;UBERON:0000154!6.06e-13!1;UBERON:0005733!6.06e-13!1;UBERON:0005730!6.06e-13!1;UBERON:0002135!6.82e-13!1;UBERON:0001301!1.09e-12!1;UBERON:0000948!4.51e-08!24;UBERON:0005498!4.51e-08!24;UBERON:0004140!4.51e-08!24;UBERON:0009881!4.51e-08!24;UBERON:0004141!4.51e-08!24;UBERON:0003084!4.51e-08!24;UBERON:0007005!4.51e-08!24;UBERON:0004139!4.51e-08!24;UBERON:0004291!4.51e-08!24;UBERON:0008814!1.80e-07!15;UBERON:0000341!3.70e-07!2;UBERON:0002133!4.42e-07!2 | |ontology_enrichment_uberon=UBERON:0001630!1.45e-24!2;UBERON:0005090!1.45e-24!2;UBERON:0007100!7.26e-21!27;UBERON:0003978!1.61e-16!3;UBERON:0009751!1.61e-16!3;UBERON:0000946!1.61e-16!3;UBERON:0002523!1.61e-16!3;UBERON:0005983!1.61e-16!3;UBERON:0002165!1.61e-16!3;UBERON:0002062!1.61e-16!3;UBERON:0007280!1.61e-16!3;UBERON:0001723!2.38e-16!3;UBERON:0001033!2.38e-16!3;UBERON:0010056!2.38e-16!3;UBERON:0003103!1.02e-15!69;UBERON:0002084!1.61e-13!1;UBERON:0002082!1.61e-13!1;UBERON:0004706!1.61e-13!1;UBERON:0002426!2.06e-13!1;UBERON:0003831!2.06e-13!1;UBERON:0003898!2.06e-13!1;UBERON:0004830!2.06e-13!1;UBERON:0001774!2.06e-13!1;UBERON:0003830!2.06e-13!1;UBERON:0005175!2.06e-13!1;UBERON:0003897!2.06e-13!1;UBERON:0001103!2.06e-13!1;UBERON:0010084!2.06e-13!1;UBERON:0000989!2.95e-13!1;UBERON:0008811!2.95e-13!1;UBERON:0006258!2.95e-13!1;UBERON:0005876!2.95e-13!1;UBERON:0004874!2.95e-13!1;UBERON:0002146!3.76e-13!1;UBERON:0005623!3.76e-13!1;UBERON:0007023!3.95e-13!115;UBERON:0005418!6.06e-13!1;UBERON:0001389!6.06e-13!1;UBERON:0000026!6.06e-13!1;UBERON:0008784!6.06e-13!1;UBERON:0006058!6.06e-13!1;UBERON:0003663!6.06e-13!1;UBERON:0001383!6.06e-13!1;UBERON:0004256!6.06e-13!1;UBERON:0002529!6.06e-13!1;UBERON:0004708!6.06e-13!1;UBERON:0002101!6.06e-13!1;UBERON:0004709!6.06e-13!1;UBERON:0003661!6.06e-13!1;UBERON:0002471!6.06e-13!1;UBERON:0004357!6.06e-13!1;UBERON:0009872!6.06e-13!1;UBERON:0004347!6.06e-13!1;UBERON:0005420!6.06e-13!1;UBERON:0005732!6.06e-13!1;UBERON:0006057!6.06e-13!1;UBERON:0000978!6.06e-13!1;UBERON:0002103!6.06e-13!1;UBERON:0001665!6.06e-13!1;UBERON:0003823!6.06e-13!1;UBERON:0000154!6.06e-13!1;UBERON:0005733!6.06e-13!1;UBERON:0005730!6.06e-13!1;UBERON:0002135!6.82e-13!1;UBERON:0001301!1.09e-12!1;UBERON:0000948!4.51e-08!24;UBERON:0005498!4.51e-08!24;UBERON:0004140!4.51e-08!24;UBERON:0009881!4.51e-08!24;UBERON:0004141!4.51e-08!24;UBERON:0003084!4.51e-08!24;UBERON:0007005!4.51e-08!24;UBERON:0004139!4.51e-08!24;UBERON:0004291!4.51e-08!24;UBERON:0008814!1.80e-07!15;UBERON:0000341!3.70e-07!2;UBERON:0002133!4.42e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0002084;1.53e-21;1!UBERON:0002082;1.53e-21;1!UBERON:0002426;2.30e-21;1!UBERON:0003831;2.30e-21;1!UBERON:0003898;2.30e-21;1!UBERON:0004830;2.30e-21;1!UBERON:0003830;2.30e-21;1!UBERON:0005175;2.30e-21;1!UBERON:0001774;2.30e-21;1!UBERON:0001103;2.30e-21;1!UBERON:0000989;4.67e-21;1!UBERON:0002146;4.67e-21;1!UBERON:0008811;4.67e-21;1!UBERON:0005623;4.67e-21;1!UBERON:0007100;4.42e-20;25!UBERON:0005090;2.23e-11;2!UBERON:0001630;2.23e-11;2!UBERON:0000341;4.30e-11;2!UBERON:0004151;4.52e-08;3!UBERON:0003978;6.56e-08;3!UBERON:0000946;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002084,1.53e-21,1;UBERON:0002082,1.53e-21,1;UBERON:0010226,1.53e-21,1;UBERON:0002426,2.30e-21,1;UBERON:0003831,2.30e-21,1;UBERON:0003898,2.30e-21,1;UBERON:0004830,2.30e-21,1;UBERON:0003830,2.30e-21,1;UBERON:0005175,2.30e-21,1;UBERON:0001774,2.30e-21,1;UBERON:0001103,2.30e-21,1;UBERON:0010084,2.30e-21,1;UBERON:0000989,4.22e-21,1;UBERON:0008811,4.22e-21,1;UBERON:0006258,4.22e-21,1;UBERON:0005876,4.22e-21,1;UBERON:0004874,4.22e-21,1;UBERON:0002146,6.31e-21,1;UBERON:0005623,6.31e-21,1;UBERON:0007100,1.30e-18,27;UBERON:0005090,2.23e-11,2;UBERON:0001630,2.23e-11,2;UBERON:0000341,4.52e-11,2;UBERON:0007023,8.70e-11,114;UBERON:0004151,4.52e-08,3;UBERON:0003978,7.26e-08,3;UBERON:0009751,7.26e-08,3;UBERON:0000946,7.26e-08,3;UBERON:0002523,7.26e-08,3;UBERON:0005983,7.26e-08,3;UBERON:0002165,7.26e-08,3;UBERON:0002062,7.26e-08,3;UBERON:0007280,7.26e-08,3;UBERON:0003103,1.85e-07,68 | |||
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|short_description=p1@MIR208B | |short_description=p1@MIR208B | ||
}} | }} |
Latest revision as of 10:48, 19 September 2015
Short description: | p1@MIR208B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MIR208B_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | -238bp_to_NR_030624_5end |
EntrezGene: | MIR208B |
HGNC: | 33669 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart left ventricle | 1.53e-21 | 1 |
cardiac ventricle | 1.53e-21 | 1 |
future cardiac ventricle | 1.53e-21 | 1 |
chest muscle | 2.30e-21 | 1 |
respiratory system muscle | 2.30e-21 | 1 |
skeletal muscle of trunk | 2.30e-21 | 1 |
respiratory system skeletal muscle | 2.30e-21 | 1 |
thoracic segment muscle | 2.30e-21 | 1 |
chest organ | 2.30e-21 | 1 |
muscle of trunk | 2.30e-21 | 1 |
diaphragm | 2.30e-21 | 1 |
future diaphragm | 2.30e-21 | 1 |
penis | 4.22e-21 | 1 |
intromittent organ | 4.22e-21 | 1 |
lateral plate mesenchyme | 4.22e-21 | 1 |
undifferentiated genital tubercle | 4.22e-21 | 1 |
somatopleure | 4.22e-21 | 1 |
pulmonary valve | 6.31e-21 | 1 |
semi-lunar valve | 6.31e-21 | 1 |
primary circulatory organ | 1.30e-18 | 27 |
muscle structure | 2.23e-11 | 2 |
muscle organ | 2.23e-11 | 2 |
throat | 4.52e-11 | 2 |
adult organism | 8.70e-11 | 114 |
cardiac chamber | 4.52e-08 | 3 |
valve | 7.26e-08 | 3 |
cardiac mesenchyme | 7.26e-08 | 3 |
cardial valve | 7.26e-08 | 3 |
tunica intima | 7.26e-08 | 3 |
heart layer | 7.26e-08 | 3 |
endocardium | 7.26e-08 | 3 |
endocardial cushion | 7.26e-08 | 3 |
presumptive endocardium | 7.26e-08 | 3 |
compound organ | 1.85e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
heart disease | 8.98e-41 | 2 |
vascular disease | 3.45e-21 | 1 |
ischemia | 3.45e-21 | 1 |
extrinsic cardiomyopathy | 3.45e-21 | 1 |
myocardial ischemia | 3.45e-21 | 1 |
myocardial infarction | 3.45e-21 | 1 |
cardiovascular system disease | 5.72e-21 | 4 |