FFCP PHASE1:Hg19::chr4:95972809..95972820,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:95972809..95972820,+
|short_description=p13@BMPR1B
|description=CAGE_peak_13_at_BMPR1B_5end
|association_with_transcript=-9bp_to_ENST00000440890,ENST000005...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=658 | |EntrezGene=658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1077 | |HGNC=1077 | ||
|TSSclassifier=strong | |||
|UniProt=O00238 | |UniProt=O00238 | ||
|association_with_transcript=-9bp_to_ENST00000440890,ENST00000509540_5end | |||
|cluster_id=chr4:95972809..95972820,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_13_at_BMPR1B_5end | |||
|id=chr4:95972809..95972820,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;8.16e-15;3!UBERON:0006222;2.81e-11;1!UBERON:0005754;2.81e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.99e-100!57;UBERON:0005068!9.99e-100!57;UBERON:0006241!9.99e-100!57;UBERON:0007135!9.99e-100!57;UBERON:0002616!3.18e-82!59;UBERON:0001017!3.11e-80!82;UBERON:0005743!1.46e-79!86;UBERON:0000955!7.02e-76!69;UBERON:0006238!7.02e-76!69;UBERON:0000073!1.53e-74!94;UBERON:0001016!1.53e-74!94;UBERON:0003075!3.80e-73!86;UBERON:0007284!3.80e-73!86;UBERON:0007023!2.83e-70!115;UBERON:0002780!5.43e-70!41;UBERON:0001890!5.43e-70!41;UBERON:0006240!5.43e-70!41;UBERON:0002346!1.81e-69!90;UBERON:0002020!1.63e-68!34;UBERON:0003528!1.63e-68!34;UBERON:0001893!2.53e-68!34;UBERON:0003080!3.53e-68!42;UBERON:0002791!2.12e-65!33;UBERON:0001869!2.50e-62!32;UBERON:0003056!5.78e-48!61;UBERON:0002619!2.77e-47!22;UBERON:0000033!1.94e-45!123;UBERON:0000153!7.00e-43!129;UBERON:0007811!7.00e-43!129;UBERON:0000956!2.81e-41!25;UBERON:0000203!2.81e-41!25;UBERON:0001950!1.56e-40!20;UBERON:0004121!3.81e-39!169;UBERON:0000924!5.25e-38!173;UBERON:0006601!5.25e-38!173;UBERON:0003076!2.56e-31!15;UBERON:0003057!2.56e-31!15;UBERON:0002420!1.40e-30!9;UBERON:0007245!1.40e-30!9;UBERON:0010009!1.40e-30!9;UBERON:0010011!1.40e-30!9;UBERON:0000454!1.40e-30!9;UBERON:0002308!4.13e-30!9;UBERON:0000125!4.13e-30!9;UBERON:0009663!9.11e-24!7;UBERON:0000025!1.49e-22!194;UBERON:0004733!1.58e-22!12;UBERON:0002028!1.58e-22!12;UBERON:0007277!1.58e-22!12;UBERON:0000200!1.97e-21!6;UBERON:0004732!1.16e-20!13;UBERON:0002298!3.24e-20!8;UBERON:0004111!1.00e-19!241;UBERON:0000349!9.57e-19!5;UBERON:0001871!5.09e-16!7;UBERON:0000477!5.45e-16!286;UBERON:0000369!1.31e-14!4;UBERON:0002435!1.31e-14!4;UBERON:0000204!1.31e-14!4;UBERON:0010082!1.31e-14!4;UBERON:0002680!6.10e-14!9;UBERON:0001895!6.10e-14!9;UBERON:0010092!6.10e-14!9;UBERON:0000064!3.45e-13!219;UBERON:0000483!5.62e-13!309;UBERON:0000119!9.40e-13!312;UBERON:0002771!6.72e-12!3;UBERON:0000475!9.99e-12!365;UBERON:0001872!1.06e-11!5;UBERON:0005383!1.49e-11!3;UBERON:0005382!1.49e-11!3;UBERON:0001896!4.29e-11!3;UBERON:0005290!4.29e-11!3;UBERON:0010096!4.29e-11!3;UBERON:0000988!5.28e-11!3;UBERON:0006331!6.07e-11!3;UBERON:0002240!6.51e-11!3;UBERON:0001954!7.11e-09!2;UBERON:0003022!7.11e-09!2;UBERON:0002421!7.11e-09!2;UBERON:0002600!7.11e-09!2;UBERON:0000062!7.73e-09!511;UBERON:0001870!1.11e-08!2;UBERON:0001876!1.55e-08!2;UBERON:0001897!2.40e-08!2;UBERON:0001873!4.59e-08!2;UBERON:0010122!4.59e-08!2;UBERON:0002148!4.75e-08!2;UBERON:0009662!4.75e-08!2;UBERON:0001875!5.29e-08!2;UBERON:0006514!5.29e-08!2;UBERON:0002360!7.78e-08!2;UBERON:0000094!7.78e-08!2;UBERON:0007645!7.78e-08!2;UBERON:0002021!4.45e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;8.23e-42;22!UBERON:0002791;5.65e-38;32!UBERON:0000956;7.66e-37;25!UBERON:0000203;7.66e-37;25!UBERON:0001869;1.23e-36;32!UBERON:0003528;2.36e-33;34!UBERON:0002020;2.36e-33;34!UBERON:0002780;3.65e-33;41!UBERON:0001890;3.65e-33;41!UBERON:0001893;1.07e-30;34!UBERON:0001870;1.10e-30;3!UBERON:0001950;2.56e-29;20!UBERON:0000073;7.60e-27;53!UBERON:0002616;7.60e-27;53!UBERON:0001954;3.28e-21;2!UBERON:0002702;3.28e-21;2!UBERON:0003022;3.28e-21;2!UBERON:0002421;3.28e-21;2!UBERON:0002600;3.28e-21;2!UBERON:0001017;5.04e-20;75!UBERON:0000349;1.09e-18;5!UBERON:0000200;1.11e-15;6!UBERON:0000955;1.57e-15;68!UBERON:0006947;3.38e-14;3!UBERON:0004054;3.38e-14;3!UBERON:0001016;1.18e-12;83!UBERON:0001874;2.81e-11;1!UBERON:0001000;2.81e-11;1!UBERON:0000998;2.81e-11;1!UBERON:0006868;2.81e-11;1!UBERON:0005352;2.81e-11;1!UBERON:0007023;5.41e-11;114!UBERON:0005904;6.98e-11;4!UBERON:0002420;1.66e-10;9!UBERON:0007245;1.66e-10;9!UBERON:0010009;1.66e-10;9!UBERON:0010011;1.66e-10;9!UBERON:0000454;1.66e-10;9!UBERON:0002021;6.96e-09;5!UBERON:0004733;3.13e-08;12!UBERON:0002028;3.13e-08;12!UBERON:0002037;7.56e-08;6!UBERON:0004732;1.24e-07;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.10e-51,53;UBERON:0002616,8.10e-51,53;UBERON:0001049,5.04e-48,56;UBERON:0005068,5.04e-48,56;UBERON:0006241,5.04e-48,56;UBERON:0007135,5.04e-48,56;UBERON:0002780,3.65e-44,41;UBERON:0001890,3.65e-44,41;UBERON:0003080,3.65e-44,41;UBERON:0006240,3.65e-44,41;UBERON:0002619,7.94e-42,22;UBERON:0002791,1.56e-41,32;UBERON:0001869,1.56e-41,32;UBERON:0003528,4.58e-39,34;UBERON:0002020,4.58e-39,34;UBERON:0001893,4.58e-39,34;UBERON:0000955,1.12e-38,68;UBERON:0006238,1.12e-38,68;UBERON:0000956,7.42e-37,25;UBERON:0000203,7.42e-37,25;UBERON:0001017,2.55e-36,81;UBERON:0001016,1.57e-32,89;UBERON:0003075,2.97e-32,82;UBERON:0007284,2.97e-32,82;UBERON:0002346,1.16e-30,86;UBERON:0001870,4.10e-30,3;UBERON:0003056,2.85e-29,61;UBERON:0001950,3.16e-29,20;UBERON:0007023,4.80e-29,114;UBERON:0010371,5.39e-25,104;UBERON:0001954,1.70e-21,2;UBERON:0003022,1.70e-21,2;UBERON:0002421,1.70e-21,2;UBERON:0002600,1.70e-21,2;UBERON:0002702,7.05e-21,2;UBERON:0010314,3.24e-19,132;UBERON:0000349,5.97e-19,5;UBERON:0004121,5.20e-16,171;UBERON:0000924,5.20e-16,171;UBERON:0006601,5.20e-16,171;UBERON:0000200,1.23e-15,6;UBERON:0006947,2.42e-14,3;UBERON:0004054,2.42e-14,3;UBERON:0000025,1.88e-12,192;UBERON:0004111,2.41e-12,240;UBERON:0011216,1.19e-11,223;UBERON:0000998,1.45e-11,1;UBERON:0006868,1.45e-11,1;UBERON:0001874,2.42e-11,1;UBERON:0001000,3.28e-11,1;UBERON:0005352,3.28e-11,1;UBERON:0005904,5.44e-11,4;UBERON:0002420,1.43e-10,9;UBERON:0007245,1.43e-10,9;UBERON:0010009,1.43e-10,9;UBERON:0010011,1.43e-10,9;UBERON:0000454,1.43e-10,9;UBERON:0002021,7.55e-09,5;UBERON:0004733,3.33e-08,12;UBERON:0002028,3.33e-08,12;UBERON:0007277,3.33e-08,12;UBERON:0002037,7.32e-08,6;UBERON:0006215,7.32e-08,6;UBERON:0004732,1.31e-07,13;UBERON:0000483,7.81e-07,306;UBERON:0000119,9.66e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.54736358051564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,3.05163472634166,2.98564001814306,0.591095237907095,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,1.1713222286267,0,0,0,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,2.38568906942791,1.90684768556206,0,0,0,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.976210119215705,1.001527445652,1.14681839138014,0.443716206147409,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655257829152084,0,0,0,0,0,0,0,0,0,0.642292250964595,0,1.59633859057151,1.02558182120378,0,0.414943514785307,0.807378228159255,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.405225507710368,0.781078098613847,1.2401207790071,0.951237152908602,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.591954962065642,0,0,0,1.41404030924402,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.44806194206653,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.54736358051564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.844175070377856,3.05163472634166,2.98564001814306,0.591095237907095,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,1.1713222286267,0,0,0,1.18375320854817,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90392296312213,0,0,1.07628353124994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,2.38568906942791,1.90684768556206,0,0,0,0,0,0.668245123238271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.92562821219883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.976210119215705,1.001527445652,1.14681839138014,0.443716206147409,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655257829152084,0,0,0,0,0,0,0,0,0,0.642292250964595,0,1.59633859057151,1.02558182120378,0,0.414943514785307,0.807378228159255,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.405225507710368,0.781078098613847,1.2401207790071,0.951237152908602,0,0,0,0,0,0,0,0,0,0,0,0,0.40781839786099,0.591954962065642,0,0,0,1.41404030924402,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0.891139200981258,0.4226557275834,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.44806194206653,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@BMPR1B | |||
}} | }} |
Latest revision as of 10:46, 19 September 2015
Short description: | p13@BMPR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_BMPR1B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -9bp_to_ENST00000440890, ENST00000509540_5end |
EntrezGene: | BMPR1B |
HGNC: | 1077 |
UniProt: | O00238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data