FFCP PHASE1:Hg19::chr7:73442494..73442517,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2006 | |EntrezGene=2006 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3327 | |HGNC=3327 | ||
|TSSclassifier=strong | |||
|UniProt=E9PGX4,E7ENW7,E7EWS8,E7EN51,E9PBM4 | |UniProt=E9PGX4,E7ENW7,E7EWS8,E7EN51,E9PBM4 | ||
|association_with_transcript=0bp_to_ENST00000320399,ENST00000357036,ENST00000380553,ENST00000380576,ENST00000416107,ENST00000417091,ENST00000428787,ENST00000429192,ENST00000442310,ENST00000442462,ENST00000462506,ENST00000473323,ENST00000479432_5end | |association_with_transcript=0bp_to_ENST00000320399,ENST00000357036,ENST00000380553,ENST00000380576,ENST00000416107,ENST00000417091,ENST00000428787,ENST00000429192,ENST00000442310,ENST00000442462,ENST00000462506,ENST00000473323,ENST00000479432_5end | ||
|cluster_id=chr7:73442494..73442517,+ | |||
|coexpression_cluster_id=C379 | |||
|description=CAGE_peak_1_at_ELN_5end | |description=CAGE_peak_1_at_ELN_5end | ||
|id=chr7:73442494..73442517,+ | |id=chr7:73442494..73442517,+ | ||
|ontology_enrichment_celltype=CL:0000055!6.62e-16!180;CL:0000057!1.41e-10!75;CL:0000136!5.25e-10!15;CL:0002334!5.37e-07!12 | |ontology_enrichment_celltype=CL:0000055!6.62e-16!180;CL:0000057!1.41e-10!75;CL:0000136!5.25e-10!15;CL:0002334!5.37e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000136;5.84e-10;13!CL:0002334;4.02e-07;12!CL:0002620;8.37e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.51e-11,15;CL:0000057,5.51e-11,76;CL:0002334,4.68e-07,12;CL:0002620,8.58e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.79e-24!115;UBERON:0000073!5.21e-15!94;UBERON:0001016!5.21e-15!94;UBERON:0005743!6.68e-15!86;UBERON:0000475!7.91e-14!365;UBERON:0001049!4.17e-13!57;UBERON:0005068!4.17e-13!57;UBERON:0006241!4.17e-13!57;UBERON:0007135!4.17e-13!57;UBERON:0001017!4.34e-13!82;UBERON:0002616!4.00e-12!59;UBERON:0002346!5.64e-12!90;UBERON:0003075!8.78e-12!86;UBERON:0007284!8.78e-12!86;UBERON:0000924!5.35e-11!173;UBERON:0006601!5.35e-11!173;UBERON:0004121!9.97e-11!169;UBERON:0000955!2.18e-10!69;UBERON:0006238!2.18e-10!69;UBERON:0000153!1.29e-09!129;UBERON:0007811!1.29e-09!129;UBERON:0003080!1.37e-09!42;UBERON:0002780!3.62e-09!41;UBERON:0001890!3.62e-09!41;UBERON:0006240!3.62e-09!41;UBERON:0000033!4.19e-09!123;UBERON:0001893!5.30e-08!34;UBERON:0002020!6.29e-08!34;UBERON:0003528!6.29e-08!34;UBERON:0002791!7.02e-08!33;UBERON:0003056!1.18e-07!61;UBERON:0001869!1.62e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;2.42e-07;9!UBERON:0000042;2.42e-07;9!UBERON:0003688;4.45e-07;6!UBERON:0002358;4.45e-07;6!UBERON:0003684;4.45e-07;6!UBERON:0001178;4.45e-07;6!UBERON:0007023;5.31e-07;114!UBERON:0001134;8.34e-07;16!UBERON:0002036;8.34e-07;16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.92e-23,114;UBERON:0001049,3.52e-11,56;UBERON:0005068,3.52e-11,56;UBERON:0006241,3.52e-11,56;UBERON:0007135,3.52e-11,56;UBERON:0001016,8.10e-11,89;UBERON:0001017,2.61e-10,81;UBERON:0002346,3.27e-10,86;UBERON:0000073,4.82e-10,53;UBERON:0002616,4.82e-10,53;UBERON:0003075,6.65e-10,82;UBERON:0007284,6.65e-10,82;UBERON:0004121,1.60e-09,171;UBERON:0000924,1.60e-09,171;UBERON:0006601,1.60e-09,171;UBERON:0010314,4.59e-09,132;UBERON:0000955,3.76e-08,68;UBERON:0006238,3.76e-08,68;UBERON:0002780,2.83e-07,41;UBERON:0001890,2.83e-07,41;UBERON:0003080,2.83e-07,41;UBERON:0006240,2.83e-07,41;UBERON:0010371,2.95e-07,104;UBERON:0004457,3.60e-07,12;UBERON:0000042,3.60e-07,12;UBERON:0003688,4.46e-07,6;UBERON:0002358,4.46e-07,6;UBERON:0003684,4.46e-07,6;UBERON:0001178,4.46e-07,6;UBERON:0000479,8.37e-07,773 | |||
|phase1_expression=984.333458887876,915.065639110062,1269.43536328832,1266.92795715063,1146.45520720599,944.742621600699,108.918947612374,7.58063848112197,29.7751616147816,0,2.79120467188971,0,0.791300934685361,0,3.97676850873499,0.672325146451775,0,0,0,43.8310966753365,1.02000345622126,73.0349501043945,12.0219114595044,4.24310717725941,31.8878304570799,0.0764134057479513,0,0,0,0,7.43117391917165,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,11.502590550034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86216126360609,0,0,0,1.32171328579026,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,646.614643615989,218.583329037248,153.682156617434,40.5595832996061,216.552517284673,0.0945348171640679,0.221729397462564,0.351339142772504,16.7653216637072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0.81014194788176,0,0.22452937262617,0,0,0,0.183201743930407,0,0,0,207.237303856948,81.8033105353185,0.794455084879313,100.679653882834,14.1867352879343,26.9125248068307,5.33744978648525,5.67335361359468,0.622422070799533,0.134710672069688,0.490385709340376,2.11900398702904,1.15235184896,0,0,0,0,0,0,0,0,0,0,21.384051431077,189.901001685932,0,0,0,0,0,32.484343945182,448.391645253966,453.869175956829,0.794025282120147,373.668611139899,67.9112496443044,52.7710433887309,74.4225918289318,8.34725486831355,192.715123954131,129.165098294123,94.3459697228678,170.612196037259,93.4004964703224,30.1003168560319,12.6083924318673,308.148326304421,236.565926638499,77.9978724628243,0,0,0,0.121973706129595,0,0.69716365721711,1.45125477021519,0.252320850875628,0,34.4188971125595,91.9834541615826,1.38134921352481,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,16.8290128564135,0.4115740113314,8.82052268313252,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,0,0,0.463721619900307,1.05667824812239,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.621984346622316,0.864719720501769,0.25248486685276,0.126995788584338,0,0,13.6857956818164,0.205654985406647,0,0,0.897048674762886,15.6945624779981,2.3468251462704,0.258543431515556,3.57656445851882,0.845302752556,1.32969058292435,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,300.249943930953,339.991330068977,2.85273810081437,100.333445520632,34.9309748335652,59.6273007588852,0,0,0,0,5.08189248444927,2.60279707715243,14.6924874427762,2.17771144934653,14.0346525363696,0,0,0,0.12269149171914,0,0,41.3862014446306,89.5713523761752,106.764534977974,0.702848489956279,16.8529815847523,102.333376825193,56.9101892108777,94.320034992032,37.7956795510491,0.868836144680828,2.15381273209015,6.51972505240626,0,0,0,0,1.66435439510497,1.81434175997808,579.331731256844,1087.43154271921,1174.84315529685,245.0020533769,693.363322485383,198.493738691212,409.633863388175,1.07946785661859,2.66342587969691,2.13530605635904,0.519254429183621,3.48631135379878,0,0,0.0920809889358963,1.14814448164607,1.27463817604702,0.524497659837696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,98.7332981698098,39.6897721296644,40.6722993330379,18.0321770383514,0,0,0,0,0,4.06017016826912,1.23238893691716,2.6095624703442,5.09995318192763,0.214840489736547,3.19036726611303,2.72725207731523,37.8386151498634,0,0,0,0,0,6.61105928344344,0.6970372701606,2.46426864140871,0,0,43.921839927629,13.3106144670052,0.372158369359667,6.96034734381197,0,0.511795582622668,0.42793898803392,2.22742273548156,7.06453776179307,0.179872457583315,0.823611089208164,0.117812402345686,0.808729926293264,3.17020642346017,0,0.48763373908959,57.0289565737206,2.11300293513511,0.409499734223957,0.282810863907425,2.26016233240486,1.10273068709225,55.0654349450212,53.9294588862128,0,0,0,4.02770547529675,0,0,0,0,1.06428319221179,115.475876507822,170.245459660269,0,0,0,2.68120910214315,0,15.345439526615,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.5878168627749,0,0.111443384277478,0,0.71623345421307,9.2059051058118,0,2.98244294329889,2.81338832821025,0,0,0,507.285378087224,6.3545300572164,0,0,0,593.152493671067,0,0,0,9.86434056369336,0,0,6.78532922266653,2.59750674853184,15.9691038400955,0,0,25.3749851402178,0,0,0,15.5134517958659,8.16492917473112,0.868124974666461,1.77148277162768,1.20596438625408,0,2.98564001814306,1.47773809476774,5.70402032600329,0,0,13.6201957551721,0,0,0,0,0.638002319463839,0.915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,13.9336670350991,4.95362361218699,52.5485924642918,0,0,0,8.82954842046869,294.545996558655,2.10838001152805,0,0,0,2.76209081994573,50.8161007404388,3.0607276163049,22.6207955069987,0,0,0,0,0,0,0,0,0,0,0,16.9484868194769,0,0,0,0,27.3509026497343,0,203.60864744326,0,0,2.27918865441163,0,0,14.3013506475366,0,0,0,0,0,0,0,0.135904206073614,0,0,0,2.40168115483916,2.60120219894787,0,0,0,67.3070587066133,68.06064593147,2.87149209830726,17.7714310444102,27.8996931288771,11.8280872444192,348.547855261136,5.04419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| 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| ||
|short_description=p1@ELN | |short_description=p1@ELN | ||
}} | }} |
Latest revision as of 10:42, 19 September 2015
Short description: | p1@ELN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ELN_5end |
Coexpression cluster: | C379_Preadipocyte_Adipocyte_tenocyte_Chondrocyte_basal_aorta_trachea |
Association with transcript: | 0bp_to_ENST00000320399, ENST00000357036, ENST00000380553, ENST00000380576, ENST00000416107, ENST00000417091, ENST00000428787, ENST00000429192, ENST00000442310, ENST00000442462, ENST00000462506, ENST00000473323, ENST00000479432_5end |
EntrezGene: | ELN |
HGNC: | 3327 |
UniProt: | E9PGX4E7ENW7E7EWS8E7EN51E9PBM4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.51e-11 | 15 |
fibroblast | 5.51e-11 | 76 |
preadipocyte | 4.68e-07 | 12 |
skin fibroblast | 8.58e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.92e-23 | 114 |
neural tube | 3.52e-11 | 56 |
neural rod | 3.52e-11 | 56 |
future spinal cord | 3.52e-11 | 56 |
neural keel | 3.52e-11 | 56 |
nervous system | 8.10e-11 | 89 |
central nervous system | 2.61e-10 | 81 |
neurectoderm | 3.27e-10 | 86 |
regional part of nervous system | 4.82e-10 | 53 |
regional part of brain | 4.82e-10 | 53 |
neural plate | 6.65e-10 | 82 |
presumptive neural plate | 6.65e-10 | 82 |
ectoderm-derived structure | 1.60e-09 | 171 |
ectoderm | 1.60e-09 | 171 |
presumptive ectoderm | 1.60e-09 | 171 |
structure with developmental contribution from neural crest | 4.59e-09 | 132 |
brain | 3.76e-08 | 68 |
future brain | 3.76e-08 | 68 |
regional part of forebrain | 2.83e-07 | 41 |
forebrain | 2.83e-07 | 41 |
anterior neural tube | 2.83e-07 | 41 |
future forebrain | 2.83e-07 | 41 |
ecto-epithelium | 2.95e-07 | 104 |
cavity lining | 3.60e-07 | 12 |
serous membrane | 3.60e-07 | 12 |
omentum | 4.46e-07 | 6 |
peritoneum | 4.46e-07 | 6 |
abdominal cavity | 4.46e-07 | 6 |
visceral peritoneum | 4.46e-07 | 6 |
tissue | 8.37e-07 | 773 |