FFCP PHASE1:Hg19::chr14:23876391..23876406,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4624 | |EntrezGene=4624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7576 | |HGNC=7576 | ||
|TSSclassifier=strong | |||
|UniProt=P13533 | |UniProt=P13533 | ||
|association_with_transcript=25bp_to_D00943_5end | |association_with_transcript=25bp_to_D00943_5end | ||
|cluster_id=chr14:23876391..23876406,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_4_at_MYH6_5end | |description=CAGE_peak_4_at_MYH6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;2.42e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4 | |ontology_enrichment_development_v019=UBERON:0010227;2.42e-50;1!UBERON:0005062;1.13e-13;4!UBERON:0007284;1.13e-13;4 | ||
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|ontology_enrichment_disease_v019=DOID:114;1.55e-98;2!DOID:1287;5.14e-50;4!DOID:178;6.58e-50;1!DOID:326;6.58e-50;1!DOID:3978;6.58e-50;1!DOID:3394;6.58e-50;1!DOID:5844;6.58e-50;1 | |ontology_enrichment_disease_v019=DOID:114;1.55e-98;2!DOID:1287;5.14e-50;4!DOID:178;6.58e-50;1!DOID:326;6.58e-50;1!DOID:3978;6.58e-50;1!DOID:3394;6.58e-50;1!DOID:5844;6.58e-50;1 | ||
|ontology_enrichment_disease_v019_2=DOID:114,1.55e-98,2;DOID:1287,5.14e-50,4;DOID:178,6.58e-50,1;DOID:326,6.58e-50,1;DOID:3978,6.58e-50,1;DOID:3394,6.58e-50,1;DOID:5844,6.58e-50,1 | |||
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|short_description=p4@MYH6 | |short_description=p4@MYH6 | ||
}} | }} |
Latest revision as of 10:34, 19 September 2015
Short description: | p4@MYH6 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MYH6_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 25bp_to_D00943_5end |
EntrezGene: | MYH6 |
HGNC: | 7576 |
UniProt: | P13533 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 2.42e-50 | 1 |
mitral valve | 3.99e-50 | 1 |
primary circulatory organ | 5.44e-30 | 27 |
cardiac atrium | 5.56e-26 | 2 |
future cardiac atrium | 5.56e-26 | 2 |
atrioventricular valve | 7.14e-26 | 2 |
cardiac chamber | 8.00e-18 | 3 |
valve | 9.46e-18 | 3 |
cardiac mesenchyme | 9.46e-18 | 3 |
cardial valve | 9.46e-18 | 3 |
tunica intima | 9.46e-18 | 3 |
heart layer | 9.46e-18 | 3 |
endocardium | 9.46e-18 | 3 |
endocardial cushion | 9.46e-18 | 3 |
presumptive endocardium | 9.46e-18 | 3 |
compound organ | 1.71e-12 | 68 |
heart | 2.56e-09 | 24 |
primitive heart tube | 2.56e-09 | 24 |
primary heart field | 2.56e-09 | 24 |
anterior lateral plate mesoderm | 2.56e-09 | 24 |
heart tube | 2.56e-09 | 24 |
heart primordium | 2.56e-09 | 24 |
cardiac mesoderm | 2.56e-09 | 24 |
cardiogenic plate | 2.56e-09 | 24 |
heart rudiment | 2.56e-09 | 24 |
blood vessel layer | 2.18e-08 | 7 |
circulatory system | 6.64e-08 | 112 |
adult organism | 8.86e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.55e-98 | 2 |
cardiovascular system disease | 5.14e-50 | 4 |
vascular disease | 6.58e-50 | 1 |
ischemia | 6.58e-50 | 1 |
extrinsic cardiomyopathy | 6.58e-50 | 1 |
myocardial ischemia | 6.58e-50 | 1 |
myocardial infarction | 6.58e-50 | 1 |