FFCP PHASE1:Hg19::chr12:56583243..56583293,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6601 | |EntrezGene=6601 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11105 | |HGNC=11105 | ||
|TSSclassifier=strong | |||
|UniProt=F8VXC8,F8VZW6 | |UniProt=F8VXC8,F8VZW6 | ||
|association_with_transcript=0bp_to_ENST00000550150,ENST00000550164,ENST00000552674_5end | |association_with_transcript=0bp_to_ENST00000550150,ENST00000550164,ENST00000552674_5end | ||
|cluster_id=chr12:56583243..56583293,- | |||
|description=CAGE_peak_1_at_SMARCC2_5end | |description=CAGE_peak_1_at_SMARCC2_5end | ||
|id=chr12:56583243..56583293,- | |id=chr12:56583243..56583293,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.20e-28!115;UBERON:0001049!3.45e-22!57;UBERON:0005068!3.45e-22!57;UBERON:0006241!3.45e-22!57;UBERON:0007135!3.45e-22!57;UBERON:0000955!2.57e-20!69;UBERON:0006238!2.57e-20!69;UBERON:0001017!5.47e-19!82;UBERON:0002616!1.03e-18!59;UBERON:0005743!2.67e-18!86;UBERON:0000073!6.11e-17!94;UBERON:0001016!6.11e-17!94;UBERON:0003075!1.09e-16!86;UBERON:0007284!1.09e-16!86;UBERON:0003080!2.49e-16!42;UBERON:0002780!7.05e-16!41;UBERON:0001890!7.05e-16!41;UBERON:0006240!7.05e-16!41;UBERON:0002346!5.62e-15!90;UBERON:0001893!1.91e-14!34;UBERON:0002791!6.00e-14!33;UBERON:0002020!1.05e-13!34;UBERON:0003528!1.05e-13!34;UBERON:0001869!2.76e-13!32;UBERON:0000153!6.11e-13!129;UBERON:0007811!6.11e-13!129;UBERON:0000033!2.40e-12!123;UBERON:0003056!7.38e-12!61;UBERON:0002619!3.73e-11!22;UBERON:0004121!5.22e-11!169;UBERON:0000956!6.83e-11!25;UBERON:0000203!6.83e-11!25;UBERON:0001950!2.23e-10!20;UBERON:0000924!3.69e-10!173;UBERON:0006601!3.69e-10!173;UBERON:0000025!1.16e-07!194;UBERON:0004111!3.76e-07!241;UBERON:0003076!4.26e-07!15;UBERON:0003057!4.26e-07!15 | |ontology_enrichment_uberon=UBERON:0007023!8.20e-28!115;UBERON:0001049!3.45e-22!57;UBERON:0005068!3.45e-22!57;UBERON:0006241!3.45e-22!57;UBERON:0007135!3.45e-22!57;UBERON:0000955!2.57e-20!69;UBERON:0006238!2.57e-20!69;UBERON:0001017!5.47e-19!82;UBERON:0002616!1.03e-18!59;UBERON:0005743!2.67e-18!86;UBERON:0000073!6.11e-17!94;UBERON:0001016!6.11e-17!94;UBERON:0003075!1.09e-16!86;UBERON:0007284!1.09e-16!86;UBERON:0003080!2.49e-16!42;UBERON:0002780!7.05e-16!41;UBERON:0001890!7.05e-16!41;UBERON:0006240!7.05e-16!41;UBERON:0002346!5.62e-15!90;UBERON:0001893!1.91e-14!34;UBERON:0002791!6.00e-14!33;UBERON:0002020!1.05e-13!34;UBERON:0003528!1.05e-13!34;UBERON:0001869!2.76e-13!32;UBERON:0000153!6.11e-13!129;UBERON:0007811!6.11e-13!129;UBERON:0000033!2.40e-12!123;UBERON:0003056!7.38e-12!61;UBERON:0002619!3.73e-11!22;UBERON:0004121!5.22e-11!169;UBERON:0000956!6.83e-11!25;UBERON:0000203!6.83e-11!25;UBERON:0001950!2.23e-10!20;UBERON:0000924!3.69e-10!173;UBERON:0006601!3.69e-10!173;UBERON:0000025!1.16e-07!194;UBERON:0004111!3.76e-07!241;UBERON:0003076!4.26e-07!15;UBERON:0003057!4.26e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;1.89e-12;53!UBERON:0002616;1.89e-12;53!UBERON:0001893;2.52e-12;34!UBERON:0002780;4.31e-12;41!UBERON:0001890;4.31e-12;41!UBERON:0002791;4.88e-12;32!UBERON:0001869;6.30e-12;32!UBERON:0003528;1.06e-11;34!UBERON:0002020;1.06e-11;34!UBERON:0002619;3.40e-11;22!UBERON:0000956;6.43e-11;25!UBERON:0000203;6.43e-11;25!UBERON:0001950;2.04e-10;20!UBERON:0000955;2.67e-09;68!UBERON:0001017;6.94e-09;75!UBERON:0001016;7.06e-08;83!UBERON:0007023;2.32e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.12e-27,114;UBERON:0001049,1.01e-21,56;UBERON:0005068,1.01e-21,56;UBERON:0006241,1.01e-21,56;UBERON:0007135,1.01e-21,56;UBERON:0000073,1.01e-20,53;UBERON:0002616,1.01e-20,53;UBERON:0000955,7.24e-20,68;UBERON:0006238,7.24e-20,68;UBERON:0001017,1.48e-18,81;UBERON:0001016,4.33e-17,89;UBERON:0003075,1.63e-16,82;UBERON:0007284,1.63e-16,82;UBERON:0002780,7.05e-16,41;UBERON:0001890,7.05e-16,41;UBERON:0003080,7.05e-16,41;UBERON:0006240,7.05e-16,41;UBERON:0002346,9.13e-15,86;UBERON:0001893,1.91e-14,34;UBERON:0003528,1.05e-13,34;UBERON:0002020,1.05e-13,34;UBERON:0002791,2.35e-13,32;UBERON:0001869,2.76e-13,32;UBERON:0010371,1.81e-11,104;UBERON:0003056,3.14e-11,61;UBERON:0002619,3.73e-11,22;UBERON:0000956,6.83e-11,25;UBERON:0000203,6.83e-11,25;UBERON:0001950,2.23e-10,20;UBERON:0004121,4.94e-10,171;UBERON:0000924,4.94e-10,171;UBERON:0006601,4.94e-10,171;UBERON:0011216,1.10e-09,223;UBERON:0010314,7.39e-09,132;UBERON:0000025,1.68e-07,192;UBERON:0003076,4.26e-07,15;UBERON:0003057,4.26e-07,15;UBERON:0004111,5.70e-07,240 | |||
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|short_description=p1@SMARCC2 | |short_description=p1@SMARCC2 | ||
}} | }} |
Latest revision as of 10:17, 19 September 2015
Short description: | p1@SMARCC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SMARCC2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000550150, ENST00000550164, ENST00000552674_5end |
EntrezGene: | SMARCC2 |
HGNC: | 11105 |
UniProt: | F8VXC8F8VZW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data