FFCP PHASE1:Hg19::chr2:201171242..201171253,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:201171242..201171253,+ to FFCP PHASE1:Hg19::chr2:201171242..201171253,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26010 | |EntrezGene=26010 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24574 | |HGNC=24574 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000360760_5end | |||
|cluster_id=chr2:201171242..201171253,+ | |||
|description=CAGE_peak_6_at_SPATS2L_5end | |||
|id=chr2:201171242..201171253,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,1.69e-07,58;CL:0002076,8.05e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!5.08e-12!365;UBERON:0004119!1.67e-11!169;UBERON:0000925!1.67e-11!169;UBERON:0006595!1.67e-11!169;UBERON:0000481!6.94e-11!347;UBERON:0000033!1.57e-10!123;UBERON:0001007!1.79e-10!155;UBERON:0001555!1.79e-10!155;UBERON:0007026!1.79e-10!155;UBERON:0000062!6.93e-10!511;UBERON:0000153!7.46e-10!129;UBERON:0007811!7.46e-10!129;UBERON:0000467!1.78e-09!625;UBERON:0002619!2.96e-09!22;UBERON:0000480!3.12e-09!626;UBERON:0004121!8.68e-09!169;UBERON:0000477!9.81e-09!286;UBERON:0004111!1.11e-08!241;UBERON:0000161!1.35e-08!35;UBERON:0000468!1.57e-08!659;UBERON:0000956!2.00e-08!25;UBERON:0000203!2.00e-08!25;UBERON:0001950!2.07e-08!20;UBERON:0002020!4.84e-08!34;UBERON:0003528!4.84e-08!34;UBERON:0000924!5.15e-08!173;UBERON:0006601!5.15e-08!173;UBERON:0000165!6.59e-08!28;UBERON:0000930!6.59e-08!28;UBERON:0001869!7.94e-08!32;UBERON:0001893!1.17e-07!34;UBERON:0002791!1.52e-07!33;UBERON:0000077!1.81e-07!130;UBERON:0007023!1.82e-07!115;UBERON:0003102!1.84e-07!95;UBERON:0001049!3.51e-07!57;UBERON:0005068!3.51e-07!57;UBERON:0006241!3.51e-07!57;UBERON:0007135!3.51e-07!57;UBERON:0000922!4.86e-07!612;UBERON:0001017!5.03e-07!82;UBERON:0003080!5.48e-07!42;UBERON:0002050!5.50e-07!605;UBERON:0005423!5.50e-07!605;UBERON:0000166!7.80e-07!21;UBERON:0000923!8.41e-07!604;UBERON:0005291!8.41e-07!604;UBERON:0006598!8.41e-07!604;UBERON:0002532!8.41e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.75e-11;22!UBERON:0001950;4.41e-10;20!UBERON:0000956;1.48e-09;25!UBERON:0000203;1.48e-09;25!UBERON:0000165;1.00e-08;28!UBERON:0001869;3.06e-08;32!UBERON:0002791;5.42e-08;32!UBERON:0003528;6.81e-08;34!UBERON:0002020;6.81e-08;34!UBERON:0001893;2.68e-07;34!UBERON:0000161;4.80e-07;19!UBERON:0000166;4.80e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,5.16e-12,223;UBERON:0002619,1.06e-10,22;UBERON:0001950,1.06e-09,20;UBERON:0000161,2.80e-09,36;UBERON:0004119,3.16e-09,160;UBERON:0000925,3.16e-09,160;UBERON:0006595,3.16e-09,160;UBERON:0000956,4.94e-09,25;UBERON:0000203,4.94e-09,25;UBERON:0003528,6.28e-09,34;UBERON:0002020,6.28e-09,34;UBERON:0001869,1.14e-08,32;UBERON:0002791,1.19e-08,32;UBERON:0000165,1.25e-08,29;UBERON:0000930,1.25e-08,29;UBERON:0001893,3.13e-08,34;UBERON:0001007,4.43e-08,145;UBERON:0001555,4.43e-08,145;UBERON:0007026,4.43e-08,145;UBERON:0007023,4.60e-08,114;UBERON:0000166,9.83e-08,22;UBERON:0004121,2.09e-07,171;UBERON:0000924,2.09e-07,171;UBERON:0006601,2.09e-07,171;UBERON:0004111,2.51e-07,240;UBERON:0001049,2.83e-07,56;UBERON:0005068,2.83e-07,56;UBERON:0006241,2.83e-07,56;UBERON:0007135,2.83e-07,56;UBERON:0002780,3.48e-07,41;UBERON:0001890,3.48e-07,41;UBERON:0003080,3.48e-07,41;UBERON:0006240,3.48e-07,41;UBERON:0001017,5.65e-07,81;UBERON:0001016,9.05e-07,89 | |||
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| ||
|short_description=p6@SPATS2L | |||
}} | }} |
Latest revision as of 10:13, 19 September 2015
Short description: | p6@SPATS2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SPATS2L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000360760_5end |
EntrezGene: | SPATS2L |
HGNC: | 24574 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 1.69e-07 | 58 |
endo-epithelial cell | 8.05e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 5.16e-12 | 223 |
regional part of cerebral cortex | 1.06e-10 | 22 |
neocortex | 1.06e-09 | 20 |
orifice | 2.80e-09 | 36 |
endoderm-derived structure | 3.16e-09 | 160 |
endoderm | 3.16e-09 | 160 |
presumptive endoderm | 3.16e-09 | 160 |
cerebral cortex | 4.94e-09 | 25 |
pallium | 4.94e-09 | 25 |
brain grey matter | 6.28e-09 | 34 |
gray matter | 6.28e-09 | 34 |
cerebral hemisphere | 1.14e-08 | 32 |
regional part of telencephalon | 1.19e-08 | 32 |
mouth | 1.25e-08 | 29 |
stomodeum | 1.25e-08 | 29 |
telencephalon | 3.13e-08 | 34 |
digestive system | 4.43e-08 | 145 |
digestive tract | 4.43e-08 | 145 |
primitive gut | 4.43e-08 | 145 |
adult organism | 4.60e-08 | 114 |
oral opening | 9.83e-08 | 22 |
ectoderm-derived structure | 2.09e-07 | 171 |
ectoderm | 2.09e-07 | 171 |
presumptive ectoderm | 2.09e-07 | 171 |
anatomical conduit | 2.51e-07 | 240 |
neural tube | 2.83e-07 | 56 |
neural rod | 2.83e-07 | 56 |
future spinal cord | 2.83e-07 | 56 |
neural keel | 2.83e-07 | 56 |
regional part of forebrain | 3.48e-07 | 41 |
forebrain | 3.48e-07 | 41 |
anterior neural tube | 3.48e-07 | 41 |
future forebrain | 3.48e-07 | 41 |
central nervous system | 5.65e-07 | 81 |
nervous system | 9.05e-07 | 89 |