FFCP PHASE1:Hg19::chr7:73133959..73134022,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6804 | |EntrezGene=6804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11433 | |HGNC=11433 | ||
|TSSclassifier=strong | |||
|UniProt=Q16623,A8MZ54,Q7Z5K3,E7EPM5,Q75ME0 | |UniProt=Q16623,A8MZ54,Q7Z5K3,E7EPM5,Q75ME0 | ||
|association_with_transcript=0bp_to_ENST00000222812,ENST00000395154,ENST00000395155,ENST00000395156,ENST00000428377,ENST00000462135,NM_001165903,NM_004603,uc003tyx.2,uc003tyy.2,uc010lbj.1_5end | |association_with_transcript=0bp_to_ENST00000222812,ENST00000395154,ENST00000395155,ENST00000395156,ENST00000428377,ENST00000462135,NM_001165903,NM_004603,uc003tyx.2,uc003tyy.2,uc010lbj.1_5end | ||
|cluster_id=chr7:73133959..73134022,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_STX1A_5end | |description=CAGE_peak_1_at_STX1A_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000055!1.13e-07!180 | |ontology_enrichment_celltype=CL:0000055!1.13e-07!180 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!4.68e-16!312;UBERON:0001017!6.42e-16!82;UBERON:0000073!1.09e-15!94;UBERON:0001016!1.09e-15!94;UBERON:0000955!1.47e-15!69;UBERON:0006238!1.47e-15!69;UBERON:0000483!2.11e-15!309;UBERON:0002780!2.88e-15!41;UBERON:0001890!2.88e-15!41;UBERON:0006240!2.88e-15!41;UBERON:0002619!3.11e-15!22;UBERON:0001049!8.11e-15!57;UBERON:0005068!8.11e-15!57;UBERON:0006241!8.11e-15!57;UBERON:0007135!8.11e-15!57;UBERON:0003080!1.91e-14!42;UBERON:0000025!2.57e-14!194;UBERON:0001869!2.67e-14!32;UBERON:0002616!4.18e-14!59;UBERON:0001950!4.42e-14!20;UBERON:0005743!5.49e-14!86;UBERON:0001893!1.30e-13!34;UBERON:0000956!2.52e-13!25;UBERON:0000203!2.52e-13!25;UBERON:0002791!5.31e-13!33;UBERON:0000924!8.35e-13!173;UBERON:0006601!8.35e-13!173;UBERON:0000923!8.83e-13!604;UBERON:0005291!8.83e-13!604;UBERON:0006598!8.83e-13!604;UBERON:0002532!8.83e-13!604;UBERON:0000467!9.64e-13!625;UBERON:0002050!1.15e-12!605;UBERON:0005423!1.15e-12!605;UBERON:0000480!1.23e-12!626;UBERON:0002020!1.47e-12!34;UBERON:0003528!1.47e-12!34;UBERON:0004121!2.14e-12!169;UBERON:0003056!3.10e-12!61;UBERON:0000475!4.99e-12!365;UBERON:0002346!5.02e-12!90;UBERON:0000922!5.15e-12!612;UBERON:0000033!8.23e-12!123;UBERON:0003075!1.15e-11!86;UBERON:0007284!1.15e-11!86;UBERON:0004111!1.88e-11!241;UBERON:0000468!6.05e-11!659;UBERON:0000153!3.25e-10!129;UBERON:0007811!3.25e-10!129;UBERON:0001637!4.92e-10!42;UBERON:0003509!4.92e-10!42;UBERON:0004572!4.92e-10!42;UBERON:0004573!2.10e-08!33;UBERON:0004571!2.10e-08!33;UBERON:0000477!4.72e-08!286;UBERON:0000481!2.12e-07!347 | |ontology_enrichment_uberon=UBERON:0000119!4.68e-16!312;UBERON:0001017!6.42e-16!82;UBERON:0000073!1.09e-15!94;UBERON:0001016!1.09e-15!94;UBERON:0000955!1.47e-15!69;UBERON:0006238!1.47e-15!69;UBERON:0000483!2.11e-15!309;UBERON:0002780!2.88e-15!41;UBERON:0001890!2.88e-15!41;UBERON:0006240!2.88e-15!41;UBERON:0002619!3.11e-15!22;UBERON:0001049!8.11e-15!57;UBERON:0005068!8.11e-15!57;UBERON:0006241!8.11e-15!57;UBERON:0007135!8.11e-15!57;UBERON:0003080!1.91e-14!42;UBERON:0000025!2.57e-14!194;UBERON:0001869!2.67e-14!32;UBERON:0002616!4.18e-14!59;UBERON:0001950!4.42e-14!20;UBERON:0005743!5.49e-14!86;UBERON:0001893!1.30e-13!34;UBERON:0000956!2.52e-13!25;UBERON:0000203!2.52e-13!25;UBERON:0002791!5.31e-13!33;UBERON:0000924!8.35e-13!173;UBERON:0006601!8.35e-13!173;UBERON:0000923!8.83e-13!604;UBERON:0005291!8.83e-13!604;UBERON:0006598!8.83e-13!604;UBERON:0002532!8.83e-13!604;UBERON:0000467!9.64e-13!625;UBERON:0002050!1.15e-12!605;UBERON:0005423!1.15e-12!605;UBERON:0000480!1.23e-12!626;UBERON:0002020!1.47e-12!34;UBERON:0003528!1.47e-12!34;UBERON:0004121!2.14e-12!169;UBERON:0003056!3.10e-12!61;UBERON:0000475!4.99e-12!365;UBERON:0002346!5.02e-12!90;UBERON:0000922!5.15e-12!612;UBERON:0000033!8.23e-12!123;UBERON:0003075!1.15e-11!86;UBERON:0007284!1.15e-11!86;UBERON:0004111!1.88e-11!241;UBERON:0000468!6.05e-11!659;UBERON:0000153!3.25e-10!129;UBERON:0007811!3.25e-10!129;UBERON:0001637!4.92e-10!42;UBERON:0003509!4.92e-10!42;UBERON:0004572!4.92e-10!42;UBERON:0004573!2.10e-08!33;UBERON:0004571!2.10e-08!33;UBERON:0000477!4.72e-08!286;UBERON:0000481!2.12e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.78e-15;22!UBERON:0001950;4.01e-14;20!UBERON:0000956;2.17e-13;25!UBERON:0000203;2.17e-13;25!UBERON:0001869;5.39e-13;32!UBERON:0001893;4.54e-12;34!UBERON:0002791;5.69e-12;32!UBERON:0003528;2.72e-11;34!UBERON:0002020;2.72e-11;34!UBERON:0002780;3.22e-11;41!UBERON:0001890;3.22e-11;41!UBERON:0000073;2.33e-09;53!UBERON:0002616;2.33e-09;53!UBERON:0000955;5.22e-08;68!UBERON:0004573;9.85e-08;33!UBERON:0004571;9.85e-08;33!UBERON:0001016;1.63e-07;83!UBERON:0001637;1.87e-07;42!UBERON:0003509;1.87e-07;42!UBERON:0004572;1.87e-07;42!UBERON:0001017;5.48e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0002619;2.78e-15;22!UBERON:0001950;4.01e-14;20!UBERON:0000956;2.17e-13;25!UBERON:0000203;2.17e-13;25!UBERON:0001869;5.39e-13;32!UBERON:0001893;4.54e-12;34!UBERON:0002791;5.69e-12;32!UBERON:0003528;2.72e-11;34!UBERON:0002020;2.72e-11;34!UBERON:0002780;3.22e-11;41!UBERON:0001890;3.22e-11;41!UBERON:0000073;2.33e-09;53!UBERON:0002616;2.33e-09;53!UBERON:0000955;5.22e-08;68!UBERON:0004573;9.85e-08;33!UBERON:0004571;9.85e-08;33!UBERON:0001016;1.63e-07;83!UBERON:0001637;1.87e-07;42!UBERON:0003509;1.87e-07;42!UBERON:0004572;1.87e-07;42!UBERON:0001017;5.48e-07;75 | ||
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| ||
|short_description=p1@STX1A | |short_description=p1@STX1A | ||
}} | }} |
Latest revision as of 10:10, 19 September 2015
Short description: | p1@STX1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_STX1A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000222812, ENST00000395154, ENST00000395155, ENST00000395156, ENST00000428377, ENST00000462135, NM_001165903, NM_004603, uc003tyx.2, uc003tyy.2, uc010lbj.1_5end |
EntrezGene: | STX1A |
HGNC: | 11433 |
UniProt: | Q16623A8MZ54Q7Z5K3E7EPM5Q75ME0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data