FFCP PHASE1:Hg19::chr4:95264008..95264035,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:95264008..95264035,- to FFCP PHASE1:Hg19::chr4:95264008..95264035,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27306 | |EntrezGene=27306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17890 | |HGNC=17890 | ||
|TSSclassifier=strong | |||
|UniProt=O60760 | |UniProt=O60760 | ||
|association_with_transcript=0bp_to_ENST00000295256,ENST00000506331,ENST00000514774,NM_014485,uc003hte.1_5end | |||
|cluster_id=chr4:95264008..95264035,- | |||
|coexpression_cluster_id=C17 | |||
|description=CAGE_peak_2_at_HPGDS_5end | |||
|id=chr4:95264008..95264035,- | |||
|ontology_enrichment_celltype=CL:0002274!1.27e-07!5;CL:0000457!1.27e-07!5;CL:0002191!1.27e-07!5;CL:0000097!1.27e-07!5;CL:0000831!1.27e-07!5;CL:0002028!1.27e-07!5;CL:0000763!3.86e-07!112;CL:0000049!3.86e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.09e-09;5!CL:0000235;4.82e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.10e-09,5;CL:0002028,1.10e-09,5;CL:0000235,4.79e-09,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.22e-67!115;UBERON:0001049!1.57e-29!57;UBERON:0005068!1.57e-29!57;UBERON:0006241!1.57e-29!57;UBERON:0007135!1.57e-29!57;UBERON:0003080!1.39e-23!42;UBERON:0002616!3.86e-23!59;UBERON:0002780!9.44e-23!41;UBERON:0001890!9.44e-23!41;UBERON:0006240!9.44e-23!41;UBERON:0001893!2.77e-20!34;UBERON:0002020!3.09e-20!34;UBERON:0003528!3.09e-20!34;UBERON:0001017!3.29e-20!82;UBERON:0003075!5.58e-20!86;UBERON:0007284!5.58e-20!86;UBERON:0002791!1.37e-19!33;UBERON:0005743!1.55e-19!86;UBERON:0000955!1.68e-19!69;UBERON:0006238!1.68e-19!69;UBERON:0002346!4.24e-19!90;UBERON:0001869!2.12e-18!32;UBERON:0002619!1.77e-17!22;UBERON:0000073!4.10e-16!94;UBERON:0001016!4.10e-16!94;UBERON:0001950!1.34e-15!20;UBERON:0000956!1.38e-14!25;UBERON:0000203!1.38e-14!25;UBERON:0003056!1.44e-13!61;UBERON:0000153!4.79e-10!129;UBERON:0007811!4.79e-10!129;UBERON:0000033!8.89e-09!123;UBERON:0002298!2.32e-08!8;UBERON:0001871!3.93e-08!7;UBERON:0003076!3.51e-07!15;UBERON:0003057!3.51e-07!15;UBERON:0002308!3.70e-07!9;UBERON:0000125!3.70e-07!9;UBERON:0002420!3.74e-07!9;UBERON:0007245!3.74e-07!9;UBERON:0010009!3.74e-07!9;UBERON:0010011!3.74e-07!9;UBERON:0000454!3.74e-07!9;UBERON:0004121!9.96e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.76e-19;41!UBERON:0001890;9.76e-19;41!UBERON:0002791;9.49e-17;32!UBERON:0001893;1.59e-16;34!UBERON:0001869;3.99e-16;32!UBERON:0000073;6.52e-16;53!UBERON:0002616;6.52e-16;53!UBERON:0002619;1.05e-15;22!UBERON:0003528;2.45e-15;34!UBERON:0002020;2.45e-15;34!UBERON:0001950;2.26e-13;20!UBERON:0000956;2.73e-13;25!UBERON:0000203;2.73e-13;25!UBERON:0007023;5.20e-12;114!UBERON:0001017;2.60e-09;75!UBERON:0000955;6.64e-09;68!UBERON:0001016;2.83e-08;83!UBERON:0000125;2.45e-07;9!UBERON:0002308;2.45e-07;9!UBERON:0002420;2.60e-07;9!UBERON:0007245;2.60e-07;9!UBERON:0010009;2.60e-07;9!UBERON:0010011;2.60e-07;9!UBERON:0000454;2.60e-07;9!UBERON:0009663;4.37e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.05e-44,114;UBERON:0001049,4.70e-30,56;UBERON:0005068,4.70e-30,56;UBERON:0006241,4.70e-30,56;UBERON:0007135,4.70e-30,56;UBERON:0000073,1.56e-26,53;UBERON:0002616,1.56e-26,53;UBERON:0002780,1.90e-24,41;UBERON:0001890,1.90e-24,41;UBERON:0003080,1.90e-24,41;UBERON:0006240,1.90e-24,41;UBERON:0001017,2.67e-21,81;UBERON:0001893,9.29e-21,34;UBERON:0000955,2.24e-20,68;UBERON:0006238,2.24e-20,68;UBERON:0003075,3.16e-20,82;UBERON:0007284,3.16e-20,82;UBERON:0003528,3.51e-19,34;UBERON:0002020,3.51e-19,34;UBERON:0002791,9.36e-19,32;UBERON:0002346,1.07e-18,86;UBERON:0001869,2.09e-18,32;UBERON:0001016,6.47e-18,89;UBERON:0002619,9.06e-16,22;UBERON:0003056,1.27e-14,61;UBERON:0010371,2.31e-14,104;UBERON:0001950,1.87e-13,20;UBERON:0000956,2.41e-13,25;UBERON:0000203,2.41e-13,25;UBERON:0010314,6.42e-13,132;UBERON:0011216,1.30e-09,223;UBERON:0000125,2.00e-07,9;UBERON:0002308,2.00e-07,9;UBERON:0002420,2.11e-07,9;UBERON:0007245,2.11e-07,9;UBERON:0010009,2.11e-07,9;UBERON:0010011,2.11e-07,9;UBERON:0000454,2.11e-07,9;UBERON:0009663,3.48e-07,7;UBERON:0004121,4.97e-07,171;UBERON:0000924,4.97e-07,171;UBERON:0006601,4.97e-07,171;UBERON:0003076,6.21e-07,15;UBERON:0003057,6.21e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,5.11373559903575,0.767658796194425,0,0,0,0,0,0,13.7992206487378,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1822727152734,8.96813700770458,7.11137028892708,0,0,0,1.00311897234407,0.32592226663359,0,0,76.4275734232291,1.17842362989935,0.443067789167242,0.541607727530031,21.0069764350107,39.0178042679635,10.6884637992389,15.1992509782217,2.89803085735052,0,0,0,0.566546713487831,0,0,0.253019692019503,0.637130828648193,0,0,0.602300476311091,0.639933055772092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,3.45690697349049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,5.14809383306323,4.31030370637312,0,0,0,0,0,0,559.665438249792,228.749831566361,201.108272074549,216.179930125442,168.78613349107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,5.52482800575339,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00509759200609,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63111851975121,3.13722541229881,0,0,0,3.709476419318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48332062874083,0,0,0,0,0.507447609232169,0,0.569647187174163,1.66762242820452,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,40.1154536579961,1.7235483311913,1.05836791361941,1.29848776109822,57.0018271570321,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,0,1.23087398947712,21.6364542780786,0,2.81974010175699,0,7.91144168068228,0,0.111443384277478,0,0.23874448473769,0,0,0.994147647766298,7.87748731898871,0,0,0,1.9924798825107,0.552567831062295,0,0,0,0,0,0,0,1.87422470710174,0,0,2.90799823828566,2.22643435588443,0,0,0,2.89999830173917,0,0,0,0,0,0,0,8.07996138790233,0,3.09621927807429,1.77328571372128,0.438770794307945,0,0,1.76985594558733,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,30.4541697406348,29.9181027420282,0,0.19606253431774,0.167821586975843,0,45.6147981673687,0,0,0,0,1.99052386215701,1.41532103205343,2.4441205797345,0,0,0,4.1114691118213,0.802577647298789,5.3880822516828,0,0,0,0.789168805698781,6.04953580243319,2.75465485467441,3.6648216184523,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,1.64881328030313,0,4.06765333404958,0,0,2.53243183823515,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,11.6369572058194,1.27746588066972,0,0,3.6306712165393,2.97908551215189,0.717873024576814,0.199679000498991,0,0.446342914883745,1.20930250476107,0,0,0,0,0,0,0,3.18091875923721,8.44461117891769,0,0,0,58.9431595864931,67.3207700465416,2.00473536971481,0,1.18208560948797,0.681909645754975,0,12.729401092632,0,2.1440859791201,0.662091970365432,0,0,0,0,0,4.26881107896563,0,0,0.439656701034247,1.32506888912221,0.904980694530854,8.59511911327485,0,0,2.0289608387862,2.04365596629566,8.69902016229111,0.496166021811951,0,0,0,0,0,0.612691153526923,0.655745261419609,0,0.886068179966986,1.70836770862748,4.50687350543399,0.573409195690071,9.761756535243,3.84997698236577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46595555219346,0,0,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,1.86264752779733,1.41696576325585,8.62022838908617,1.8460472781668,1.00828678488687,0.760729777106397,2.42213468447777,0,0,0,0,0,0,0,0,1.27857558193737,0,0.781514011233092,0,0,0,1.68843961545987,0,5.99391709853434,1.96589011601111,2.18789923607288,0,3.47347824872506,0,0,0,4.03540466662589,0,1.59363533945908,9.66855834772763,0.115233987555779,0,4.14615371158673,1.24968269769413,0,0,1.96232732126285,1.25692471932802,0,5.47895232305697,0,0.47775168788705,2.07281978112303,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0,0.923965261706223,1.1598144313382,12.6284858195376,0,0,0,0,0,0,2.70109553377806,2.18559560503957,0,1.96118657403124,0,3.14093547383912,16.0405056176626,6.339835913751,0,0.0939839179798536,0.837952543656503,0,0,0,0,0.730336388246517,0.917458566809082,9.17373332169288,0,0.951880862672806,1.30905207102113,5.290268405154,0,0,0,0,0,0,0,0,0,0,2.27336094654718,0.535928260312357,1.65833887891756,11.7913615282561,3.83821167421766,3.33290204049236,1.35636710655613,1.73809200028402,0,0.572824424503484,2.02117188958219,2.61260097476354,4.44903291410865,0.471464371102113,1.2192774916755,1.66330178273007,0,0,0,0,4.69281884806909,1.4668973301944,5.2896503181046,0.665756774185513,1.40891655513718,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,5.11373559903575,0.767658796194425,0,0,0,0,0,0,13.7992206487378,0,0,0,0,0.32389366601898,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0.47296445977717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.1822727152734,8.96813700770458,7.11137028892708,0,0,0,1.00311897234407,0.32592226663359,0,0,76.4275734232291,1.17842362989935,0.443067789167242,0.541607727530031,21.0069764350107,39.0178042679635,10.6884637992389,15.1992509782217,2.89803085735052,0,0,0,0.566546713487831,0,0,0.253019692019503,0.637130828648193,0,0,0.602300476311091,0.639933055772092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,3.45690697349049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.70838706696137,5.14809383306323,4.31030370637312,0,0,0,0,0,0,559.665438249792,228.749831566361,201.108272074549,216.179930125442,168.78613349107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51366464488333,5.52482800575339,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00509759200609,0,0.749007023947182,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,1.07857100409308,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63111851975121,3.13722541229881,0,0,0,3.709476419318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48332062874083,0,0,0,0,0.507447609232169,0,0.569647187174163,1.66762242820452,0.822724546172388,0,1.08006287447623,0.79312517629427,0,0,0,0,0,0,0,40.1154536579961,1.7235483311913,1.05836791361941,1.29848776109822,57.0018271570321,0,0,5.01268954180134,0,0,0,0,0,0,0,0,0,0,1.23087398947712,21.6364542780786,0,2.81974010175699,0,7.91144168068228,0,0.111443384277478,0,0.23874448473769,0,0,0.994147647766298,7.87748731898871,0,0,0,1.9924798825107,0.552567831062295,0,0,0,0,0,0,0,1.87422470710174,0,0,2.90799823828566,2.22643435588443,0,0,0,2.89999830173917,0,0,0,0,0,0,0,8.07996138790233,0,3.09621927807429,1.77328571372128,0.438770794307945,0,0,1.76985594558733,0,0,0,0,0.31900115973192,0.0915975934018623,1.06606955203727,0,30.4541697406348,29.9181027420282,0,0.19606253431774,0.167821586975843,0,45.6147981673687,0,0,0,0,1.99052386215701,1.41532103205343,2.4441205797345,0,0,0,4.1114691118213,0.802577647298789,5.3880822516828,0,0,0,0.789168805698781,6.04953580243319,2.75465485467441,3.6648216184523,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,1.64881328030313,0,4.06765333404958,0,0,2.53243183823515,0,0,2.34798294213288,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,11.6369572058194,1.27746588066972,0,0,3.6306712165393,2.97908551215189,0.717873024576814,0.199679000498991,0,0.446342914883745,1.20930250476107,0,0,0,0,0,0,0,3.18091875923721,8.44461117891769,0,0,0,58.9431595864931,67.3207700465416,2.00473536971481,0,1.18208560948797,0.681909645754975,0,12.729401092632,0,2.1440859791201,0.662091970365432,0,0,0,0,0,4.26881107896563,0,0,0.439656701034247,1.32506888912221,0.904980694530854,8.59511911327485,0,0,2.0289608387862,2.04365596629566,8.69902016229111,0.496166021811951,0,0,0,0,0,0.612691153526923,0.655745261419609,0,0.886068179966986,1.70836770862748,4.50687350543399,0.573409195690071,9.761756535243,3.84997698236577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46595555219346,0,0,1.4720885483026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0,0,1.86264752779733,1.41696576325585,8.62022838908617,1.8460472781668,1.00828678488687,0.760729777106397,2.42213468447777,0,0,0,0,0,0,0,0,1.27857558193737,0,0.781514011233092,0,0,0,1.68843961545987,0,5.99391709853434,1.96589011601111,2.18789923607288,0,3.47347824872506,0,0,0,4.03540466662589,0,1.59363533945908,9.66855834772763,0.115233987555779,0,4.14615371158673,1.24968269769413,0,0,1.96232732126285,1.25692471932802,0,5.47895232305697,0,0.47775168788705,2.07281978112303,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0,0.923965261706223,1.1598144313382,12.6284858195376,0,0,0,0,0,0,2.70109553377806,2.18559560503957,0,1.96118657403124,0,3.14093547383912,16.0405056176626,6.339835913751,0,0.0939839179798536,0.837952543656503,0,0,0,0,0.730336388246517,0.917458566809082,9.17373332169288,0,0.951880862672806,1.30905207102113,5.290268405154,0,0,0,0,0,0,0,0,0,0,2.27336094654718,0.535928260312357,1.65833887891756,11.7913615282561,3.83821167421766,3.33290204049236,1.35636710655613,1.73809200028402,0,0.572824424503484,2.02117188958219,2.61260097476354,4.44903291410865,0.471464371102113,1.2192774916755,1.66330178273007,0,0,0,0,4.69281884806909,1.4668973301944,5.2896503181046,0.665756774185513,1.40891655513718,0 | ||
|short_description=p2@HPGDS | |||
}} | }} |
Latest revision as of 10:09, 19 September 2015
Short description: | p2@HPGDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HPGDS_5end |
Coexpression cluster: | C17_Mast_CD14_Monocytederived_Lymphatic_Smooth_mesenchymal_Macrophage |
Association with transcript: | 0bp_to_ENST00000295256, ENST00000506331, ENST00000514774, NM_014485, uc003hte.1_5end |
EntrezGene: | HPGDS |
HGNC: | 17890 |
UniProt: | O60760 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.10e-09 | 5 |
basophil mast progenitor cell | 1.10e-09 | 5 |
macrophage | 4.79e-09 | 6 |