FFCP PHASE1:Hg19::chr5:96271051..96271131,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:96271051..96271131,+
|short_description=p2@LNPEP
|description=CAGE_peak_2_at_LNPEP_5end
|association_with_transcript=0bp_to_ENST00000395784_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4012 | |EntrezGene=4012 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6656 | |HGNC=6656 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000395784_5end | |||
|cluster_id=chr5:96271051..96271131,+ | |||
|description=CAGE_peak_2_at_LNPEP_5end | |||
|id=chr5:96271051..96271131,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.92e-31!140;CL:0000037!2.96e-29!172;CL:0000566!2.96e-29!172;CL:0000988!1.42e-27!182;CL:0002032!1.79e-26!165;CL:0000837!1.79e-26!165;CL:0002087!1.22e-25!119;CL:0002031!1.69e-25!124;CL:0000838!1.00e-21!52;CL:0000542!1.33e-21!53;CL:0000051!1.33e-21!53;CL:0000084!3.05e-12!25;CL:0000827!3.05e-12!25;CL:0000791!8.86e-11!18;CL:0000789!8.86e-11!18;CL:0002420!8.86e-11!18;CL:0002419!8.86e-11!18;CL:0000790!8.86e-11!18;CL:0000945!3.57e-09!24;CL:0000826!3.57e-09!24;CL:0000766!5.46e-09!76;CL:0000763!8.23e-09!112;CL:0000049!8.23e-09!112;CL:0000236!2.39e-08!14;CL:0000557!1.17e-07!71;CL:0002057!2.62e-07!42;CL:0000839!3.40e-07!70;CL:0000625!3.57e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;2.35e-13;53!CL:0000084;2.84e-12;25!CL:0000791;7.58e-11;18!CL:0000789;7.58e-11;18!CL:0002419;7.58e-11;18!CL:0000945;3.68e-09;24!CL:0002087;7.86e-09;104!CL:0000236;3.72e-08;13!CL:0000738;1.13e-07;136!CL:0000625;3.43e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.23e-34,136;CL:0000037,9.97e-32,168;CL:0000988,1.95e-30,177;CL:0002032,7.44e-29,161;CL:0000837,7.44e-29,161;CL:0002087,1.72e-28,115;CL:0002031,2.89e-28,120;CL:0000838,9.68e-22,52;CL:0000542,1.28e-21,53;CL:0000051,1.28e-21,53;CL:0000084,2.99e-12,25;CL:0000827,2.99e-12,25;CL:0000766,7.08e-11,72;CL:0000791,8.72e-11,18;CL:0000789,8.72e-11,18;CL:0002420,8.72e-11,18;CL:0002419,8.72e-11,18;CL:0000790,8.72e-11,18;CL:0000763,2.77e-10,108;CL:0000049,2.77e-10,108;CL:0000557,2.01e-09,67;CL:0000945,3.52e-09,24;CL:0000826,3.52e-09,24;CL:0000839,6.68e-09,66;CL:0000236,2.36e-08,14;CL:0002009,8.18e-08,61;CL:0002194,9.69e-08,59;CL:0000576,9.69e-08,59;CL:0000040,9.69e-08,59;CL:0000559,9.69e-08,59;CL:0000860,2.59e-07,42;CL:0002057,2.59e-07,42;CL:0000625,3.54e-07,11;CL:0000473,8.79e-07,48;CL:0000234,8.79e-07,48 | |||
|ontology_enrichment_development_v019=CL:0000051;2.35e-13;53!CL:0000790;7.58e-11;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.66e-28!115;UBERON:0001049!6.82e-13!57;UBERON:0005068!6.82e-13!57;UBERON:0006241!6.82e-13!57;UBERON:0007135!6.82e-13!57;UBERON:0002390!1.28e-11!102;UBERON:0003061!1.28e-11!102;UBERON:0000955!1.49e-11!69;UBERON:0006238!1.49e-11!69;UBERON:0002616!2.72e-10!59;UBERON:0002193!5.30e-10!112;UBERON:0003080!1.72e-09!42;UBERON:0002780!3.71e-09!41;UBERON:0001890!3.71e-09!41;UBERON:0006240!3.71e-09!41;UBERON:0001017!5.10e-09!82;UBERON:0005743!3.85e-08!86;UBERON:0000073!4.20e-07!94;UBERON:0001016!4.20e-07!94;UBERON:0000178!5.51e-07!15;UBERON:0000179!5.51e-07!15;UBERON:0000463!5.51e-07!15;UBERON:0003075!6.42e-07!86;UBERON:0007284!6.42e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.50e-08;114!UBERON:0000073;5.46e-07;53!UBERON:0002616;5.46e-07;53!UBERON:0000178;6.16e-07;15!UBERON:0000179;6.16e-07;15!UBERON:0000463;6.16e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.92e-27,114;UBERON:0002390,1.80e-13,98;UBERON:0003061,1.80e-13,98;UBERON:0001049,1.47e-12,56;UBERON:0005068,1.47e-12,56;UBERON:0006241,1.47e-12,56;UBERON:0007135,1.47e-12,56;UBERON:0002193,1.27e-11,108;UBERON:0000073,1.62e-11,53;UBERON:0002616,1.62e-11,53;UBERON:0000955,3.06e-11,68;UBERON:0006238,3.06e-11,68;UBERON:0002780,3.66e-09,41;UBERON:0001890,3.66e-09,41;UBERON:0003080,3.66e-09,41;UBERON:0006240,3.66e-09,41;UBERON:0001017,9.13e-09,81;UBERON:0001016,1.22e-07,89;UBERON:0002405,1.96e-07,93;UBERON:0000178,5.46e-07,15;UBERON:0000179,5.46e-07,15;UBERON:0000463,5.46e-07,15;UBERON:0002371,6.32e-07,76;UBERON:0003075,7.88e-07,82;UBERON:0007284,7.88e-07,82;UBERON:0001474,8.09e-07,82 | |||
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| ||
|short_description=p2@LNPEP | |||
}} | }} |
Latest revision as of 09:37, 19 September 2015
Short description: | p2@LNPEP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LNPEP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395784_5end |
EntrezGene: | LNPEP |
HGNC: | 6656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 1.92e-27 | 114 |
hematopoietic system | 1.80e-13 | 98 |
blood island | 1.80e-13 | 98 |
neural tube | 1.47e-12 | 56 |
neural rod | 1.47e-12 | 56 |
future spinal cord | 1.47e-12 | 56 |
neural keel | 1.47e-12 | 56 |
hemolymphoid system | 1.27e-11 | 108 |
regional part of nervous system | 1.62e-11 | 53 |
regional part of brain | 1.62e-11 | 53 |
brain | 3.06e-11 | 68 |
future brain | 3.06e-11 | 68 |
regional part of forebrain | 3.66e-09 | 41 |
forebrain | 3.66e-09 | 41 |
anterior neural tube | 3.66e-09 | 41 |
future forebrain | 3.66e-09 | 41 |
central nervous system | 9.13e-09 | 81 |
nervous system | 1.22e-07 | 89 |
immune system | 1.96e-07 | 93 |
blood | 5.46e-07 | 15 |
haemolymphatic fluid | 5.46e-07 | 15 |
organism substance | 5.46e-07 | 15 |
bone marrow | 6.32e-07 | 76 |
neural plate | 7.88e-07 | 82 |
presumptive neural plate | 7.88e-07 | 82 |
bone element | 8.09e-07 | 82 |