FFCP PHASE1:Hg19::chr12:56415287..56415300,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64375 | |EntrezGene=64375 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13179 | |HGNC=13179 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=157bp_to_ENST00000547668_5end | |association_with_transcript=157bp_to_ENST00000547668_5end | ||
|cluster_id=chr12:56415287..56415300,+ | |||
|coexpression_cluster_id=C3298 | |||
|description=CAGE_peak_5_at_IKZF4_5end | |description=CAGE_peak_5_at_IKZF4_5end | ||
|id=chr12:56415287..56415300,+ | |id=chr12:56415287..56415300,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000815;1.23e-08;2!CL:0000792;1.23e-08;2!CL:0002677;1.23e-08;2!CL:0000860;2.57e-08;33!CL:0002057;2.57e-08;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.39e-08,2;CL:0000792,1.39e-08,2;CL:0002677,1.39e-08,2;CL:0000988,1.01e-07,177;CL:0000763,3.68e-07,108;CL:0000049,3.68e-07,108;CL:0000860,8.80e-07,42;CL:0002057,8.80e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1036;1.25e-12;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.61e-12,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.23e-20!115;UBERON:0002616!1.28e-11!59;UBERON:0001049!1.69e-11!57;UBERON:0005068!1.69e-11!57;UBERON:0006241!1.69e-11!57;UBERON:0007135!1.69e-11!57;UBERON:0003075!4.26e-11!86;UBERON:0007284!4.26e-11!86;UBERON:0002346!5.11e-10!90;UBERON:0000073!2.82e-09!94;UBERON:0001016!2.82e-09!94;UBERON:0002780!6.58e-09!41;UBERON:0001890!6.58e-09!41;UBERON:0006240!6.58e-09!41;UBERON:0005743!6.79e-09!86;UBERON:0000955!1.09e-08!69;UBERON:0006238!1.09e-08!69;UBERON:0001017!1.15e-08!82;UBERON:0003080!1.60e-08!42;UBERON:0002020!3.71e-08!34;UBERON:0003528!3.71e-08!34;UBERON:0001869!7.85e-08!32;UBERON:0001893!9.07e-08!34;UBERON:0003056!1.38e-07!61;UBERON:0002791!2.52e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;7.48e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,5.53e-09,2;UBERON:0002331,9.10e-07,10;UBERON:0000358,9.10e-07,10;UBERON:0000307,9.10e-07,10;UBERON:0000091,9.10e-07,10;UBERON:0000087,9.10e-07,10;UBERON:0007010,9.10e-07,10;UBERON:0007806,9.10e-07,10;UBERON:0008780,9.10e-07,10;UBERON:0005728,9.10e-07,10 | |||
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| ||
|short_description=p5@IKZF4 | |short_description=p5@IKZF4 | ||
}} | }} |
Latest revision as of 09:33, 19 September 2015
Short description: | p5@IKZF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IKZF4_5end |
Coexpression cluster: | C3298_CD4_CD14_cord_chronic_adult_mycosis_acute |
Association with transcript: | 157bp_to_ENST00000547668_5end |
EntrezGene: | IKZF4 |
HGNC: | 13179 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.39e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.39e-08 | 2 |
naive regulatory T cell | 1.39e-08 | 2 |
hematopoietic cell | 1.01e-07 | 177 |
myeloid cell | 3.68e-07 | 108 |
common myeloid progenitor | 3.68e-07 | 108 |
classical monocyte | 8.80e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.80e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 5.53e-09 | 2 |
umbilical cord | 9.10e-07 | 10 |
blastocyst | 9.10e-07 | 10 |
blastula | 9.10e-07 | 10 |
bilaminar disc | 9.10e-07 | 10 |
inner cell mass | 9.10e-07 | 10 |
cleaving embryo | 9.10e-07 | 10 |
connecting stalk | 9.10e-07 | 10 |
inner cell mass derived epiblast | 9.10e-07 | 10 |
extraembryonic mesoderm | 9.10e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.61e-12 | 8 |