FFCP PHASE1:Hg19::chr1:19229014..19229056,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8659 | |EntrezGene=8659 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=406 | |HGNC=406 | ||
|TSSclassifier=strong | |||
|UniProt=P30038,E9PF68,C9JTC4,D2D4A3 | |UniProt=P30038,E9PF68,C9JTC4,D2D4A3 | ||
|association_with_transcript=0bp_to_ENST00000290597,ENST00000375334,ENST00000375335,ENST00000538839_5end | |association_with_transcript=0bp_to_ENST00000290597,ENST00000375334,ENST00000375335,ENST00000538839_5end | ||
|cluster_id=chr1:19229014..19229056,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_1_at_ALDH4A1_5end | |description=CAGE_peak_1_at_ALDH4A1_5end | ||
|id=chr1:19229014..19229056,- | |id=chr1:19229014..19229056,- | ||
|ontology_enrichment_celltype=CL:0000325!1.10e-09!39;CL:0002077!4.90e-08!33;CL:0000136!4.04e-07!15 | |ontology_enrichment_celltype=CL:0000325!1.10e-09!39;CL:0002077!4.90e-08!33;CL:0000136!4.04e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002077;1.62e-07;34!CL:0000136;1.77e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0002077,2.58e-08,34;CL:0000136,4.04e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.39e-20!365;UBERON:0001049!5.12e-17!57;UBERON:0005068!5.12e-17!57;UBERON:0006241!5.12e-17!57;UBERON:0007135!5.12e-17!57;UBERON:0000483!9.47e-17!309;UBERON:0000119!2.97e-16!312;UBERON:0004111!3.45e-16!241;UBERON:0000025!1.16e-15!194;UBERON:0002616!6.50e-15!59;UBERON:0003075!1.10e-14!86;UBERON:0007284!1.10e-14!86;UBERON:0002346!1.32e-14!90;UBERON:0005743!2.48e-14!86;UBERON:0000924!6.12e-14!173;UBERON:0006601!6.12e-14!173;UBERON:0004121!7.88e-14!169;UBERON:0000033!1.10e-13!123;UBERON:0001017!1.14e-13!82;UBERON:0000955!3.06e-13!69;UBERON:0006238!3.06e-13!69;UBERON:0003080!3.83e-13!42;UBERON:0000153!5.46e-13!129;UBERON:0007811!5.46e-13!129;UBERON:0002780!8.94e-13!41;UBERON:0001890!8.94e-13!41;UBERON:0006240!8.94e-13!41;UBERON:0003056!1.22e-12!61;UBERON:0007023!2.38e-12!115;UBERON:0000073!4.05e-12!94;UBERON:0001016!4.05e-12!94;UBERON:0000477!5.05e-12!286;UBERON:0001893!7.01e-12!34;UBERON:0002020!8.96e-12!34;UBERON:0003528!8.96e-12!34;UBERON:0002791!2.00e-11!33;UBERON:0001869!3.59e-11!32;UBERON:0000468!2.61e-10!659;UBERON:0009569!4.62e-09!113;UBERON:0000064!6.24e-09!219;UBERON:0000956!5.24e-08!25;UBERON:0000203!5.24e-08!25;UBERON:0002417!1.13e-07!61;UBERON:0000916!1.13e-07!61;UBERON:0000467!1.51e-07!625;UBERON:0003103!1.84e-07!69;UBERON:0000480!2.42e-07!626;UBERON:0000062!2.86e-07!511;UBERON:0000481!5.96e-07!347 | |ontology_enrichment_uberon=UBERON:0000475!1.39e-20!365;UBERON:0001049!5.12e-17!57;UBERON:0005068!5.12e-17!57;UBERON:0006241!5.12e-17!57;UBERON:0007135!5.12e-17!57;UBERON:0000483!9.47e-17!309;UBERON:0000119!2.97e-16!312;UBERON:0004111!3.45e-16!241;UBERON:0000025!1.16e-15!194;UBERON:0002616!6.50e-15!59;UBERON:0003075!1.10e-14!86;UBERON:0007284!1.10e-14!86;UBERON:0002346!1.32e-14!90;UBERON:0005743!2.48e-14!86;UBERON:0000924!6.12e-14!173;UBERON:0006601!6.12e-14!173;UBERON:0004121!7.88e-14!169;UBERON:0000033!1.10e-13!123;UBERON:0001017!1.14e-13!82;UBERON:0000955!3.06e-13!69;UBERON:0006238!3.06e-13!69;UBERON:0003080!3.83e-13!42;UBERON:0000153!5.46e-13!129;UBERON:0007811!5.46e-13!129;UBERON:0002780!8.94e-13!41;UBERON:0001890!8.94e-13!41;UBERON:0006240!8.94e-13!41;UBERON:0003056!1.22e-12!61;UBERON:0007023!2.38e-12!115;UBERON:0000073!4.05e-12!94;UBERON:0001016!4.05e-12!94;UBERON:0000477!5.05e-12!286;UBERON:0001893!7.01e-12!34;UBERON:0002020!8.96e-12!34;UBERON:0003528!8.96e-12!34;UBERON:0002791!2.00e-11!33;UBERON:0001869!3.59e-11!32;UBERON:0000468!2.61e-10!659;UBERON:0009569!4.62e-09!113;UBERON:0000064!6.24e-09!219;UBERON:0000956!5.24e-08!25;UBERON:0000203!5.24e-08!25;UBERON:0002417!1.13e-07!61;UBERON:0000916!1.13e-07!61;UBERON:0000467!1.51e-07!625;UBERON:0003103!1.84e-07!69;UBERON:0000480!2.42e-07!626;UBERON:0000062!2.86e-07!511;UBERON:0000481!5.96e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.36e-10;34!UBERON:0003528;3.17e-10;34!UBERON:0002020;3.17e-10;34!UBERON:0001869;4.08e-10;32!UBERON:0002791;5.57e-10;32!UBERON:0000073;2.87e-09;53!UBERON:0002616;2.87e-09;53!UBERON:0002780;3.86e-09;41!UBERON:0001890;3.86e-09;41!UBERON:0000956;5.97e-08;25!UBERON:0000203;5.97e-08;25 | |||
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| ||
|short_description=p1@ALDH4A1 | |short_description=p1@ALDH4A1 | ||
}} | }} |
Latest revision as of 09:29, 19 September 2015
Short description: | p1@ALDH4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALDH4A1_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000290597, ENST00000375334, ENST00000375335, ENST00000538839_5end |
EntrezGene: | ALDH4A1 |
HGNC: | 406 |
UniProt: | P30038E9PF68C9JTC4D2D4A3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelial cell | 2.58e-08 | 34 |
fat cell | 4.04e-07 | 15 |