FFCP PHASE1:Hg19::chr19:50354430..50354447,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=53635 | |EntrezGene=53635 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9632 | |HGNC=9632 | ||
|TSSclassifier=strong | |||
|UniProt=Q86YD1 | |UniProt=Q86YD1 | ||
|association_with_transcript=14bp_to_ENST00000391842,NM_017432,uc002pqd.2,uc002pqe.1,uc002pqf.1_5end | |association_with_transcript=14bp_to_ENST00000391842,NM_017432,uc002pqd.2,uc002pqe.1,uc002pqf.1_5end | ||
|cluster_id=chr19:50354430..50354447,+ | |||
|coexpression_cluster_id=C3301 | |||
|description=CAGE_peak_2_at_PTOV1_5end | |description=CAGE_peak_2_at_PTOV1_5end | ||
|id=chr19:50354430..50354447,+ | |id=chr19:50354430..50354447,+ | ||
|ontology_enrichment_celltype=CL:0002321!8.50e-18!248;CL:0000220!4.53e-17!246;CL:0000222!2.43e-16!119;CL:0000055!9.80e-16!180;CL:0000393!4.77e-14!60;CL:0000211!4.77e-14!60;CL:0000183!1.04e-13!59;CL:0000187!1.87e-11!54;CL:0000680!8.67e-11!57;CL:0000056!8.67e-11!57;CL:0000355!8.67e-11!57;CL:0000192!4.93e-10!42;CL:0000514!4.93e-10!42;CL:0000359!5.22e-09!32;CL:0000133!1.53e-08!59;CL:0000221!5.78e-07!71 | |ontology_enrichment_celltype=CL:0002321!8.50e-18!248;CL:0000220!4.53e-17!246;CL:0000222!2.43e-16!119;CL:0000055!9.80e-16!180;CL:0000393!4.77e-14!60;CL:0000211!4.77e-14!60;CL:0000183!1.04e-13!59;CL:0000187!1.87e-11!54;CL:0000680!8.67e-11!57;CL:0000056!8.67e-11!57;CL:0000355!8.67e-11!57;CL:0000192!4.93e-10!42;CL:0000514!4.93e-10!42;CL:0000359!5.22e-09!32;CL:0000133!1.53e-08!59;CL:0000221!5.78e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.39e-08;32!CL:0000192;1.07e-07;43!CL:0000393;1.31e-07;61!CL:0000211;1.31e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.67e-18,250;CL:0000222,1.09e-16,121;CL:0000393,3.97e-14,61;CL:0000211,3.97e-14,61;CL:0000187,1.54e-11,55;CL:0000680,7.05e-11,58;CL:0000056,7.05e-11,58;CL:0000355,7.05e-11,58;CL:0000192,4.14e-10,43;CL:0000514,4.14e-10,43;CL:0000359,5.22e-09,32;CL:0000133,1.53e-08,59;CL:0000221,3.47e-07,72;CL:0000213,7.30e-07,58;CL:0000215,7.30e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000514;1.07e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!1.02e-27!312;UBERON:0000483!6.12e-27!309;UBERON:0000477!1.05e-19!286;UBERON:0000025!2.65e-19!194;UBERON:0000475!4.54e-19!365;UBERON:0004111!9.39e-18!241;UBERON:0000481!3.88e-17!347;UBERON:0002049!8.41e-15!79;UBERON:0007798!8.41e-15!79;UBERON:0003914!3.66e-14!118;UBERON:0000924!6.43e-14!173;UBERON:0006601!6.43e-14!173;UBERON:0005256!7.73e-14!143;UBERON:0004121!5.43e-13!169;UBERON:0005743!5.43e-13!86;UBERON:0004290!8.02e-13!70;UBERON:0004872!1.36e-12!84;UBERON:0000073!1.38e-12!94;UBERON:0001016!1.38e-12!94;UBERON:0000914!2.80e-12!83;UBERON:0002329!2.80e-12!83;UBERON:0003077!2.80e-12!83;UBERON:0003059!2.80e-12!83;UBERON:0007282!2.80e-12!83;UBERON:0009618!2.80e-12!83;UBERON:0007285!2.80e-12!83;UBERON:0000490!2.92e-12!138;UBERON:0000486!2.92e-12!82;UBERON:0001017!4.73e-12!82;UBERON:0002346!6.75e-12!90;UBERON:0001134!1.48e-11!61;UBERON:0002036!1.48e-11!61;UBERON:0003082!1.48e-11!61;UBERON:0000055!2.31e-11!69;UBERON:0001981!2.90e-11!60;UBERON:0007500!2.90e-11!60;UBERON:0004537!2.90e-11!60;UBERON:0006965!2.90e-11!60;UBERON:0003075!6.38e-11!86;UBERON:0007284!6.38e-11!86;UBERON:0002385!1.54e-10!63;UBERON:0001015!1.54e-10!63;UBERON:0000383!1.54e-10!63;UBERON:0001637!3.66e-10!42;UBERON:0003509!3.66e-10!42;UBERON:0004572!3.66e-10!42;UBERON:0000033!4.34e-10!123;UBERON:0000955!1.65e-09!69;UBERON:0006238!1.65e-09!69;UBERON:0000153!1.75e-09!129;UBERON:0007811!1.75e-09!129;UBERON:0000064!2.23e-09!219;UBERON:0003056!3.08e-09!61;UBERON:0002616!3.22e-09!59;UBERON:0000468!3.31e-09!659;UBERON:0000922!4.60e-09!612;UBERON:0004535!6.35e-09!110;UBERON:0001009!7.56e-09!113;UBERON:0002100!2.22e-08!216;UBERON:0001049!2.52e-08!57;UBERON:0005068!2.52e-08!57;UBERON:0006241!2.52e-08!57;UBERON:0007135!2.52e-08!57;UBERON:0002050!2.44e-07!605;UBERON:0005423!2.44e-07!605;UBERON:0000923!2.82e-07!604;UBERON:0005291!2.82e-07!604;UBERON:0006598!2.82e-07!604;UBERON:0002532!2.82e-07!604;UBERON:0004573!3.51e-07!33;UBERON:0004571!3.51e-07!33;UBERON:0001893!7.60e-07!34;UBERON:0002020!9.35e-07!34;UBERON:0003528!9.35e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;2.88e-07;74!UBERON:0001637;2.91e-07;42!UBERON:0003509;2.91e-07;42!UBERON:0004572;2.91e-07;42!UBERON:0007500;3.54e-07;56!UBERON:0001981;3.54e-07;56!UBERON:0004537;3.54e-07;56 | |||
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|short_description=p2@PTOV1 | |short_description=p2@PTOV1 | ||
}} | }} |
Latest revision as of 09:13, 19 September 2015
Short description: | p2@PTOV1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PTOV1_5end |
Coexpression cluster: | C3301_Renal_Placental_Mesenchymal_Pericytes_Osteoblast_Astrocyte_Nucleus |
Association with transcript: | 14bp_to_ENST00000391842, NM_017432, uc002pqd.2, uc002pqe.1, uc002pqf.1_5end |
EntrezGene: | PTOV1 |
HGNC: | 9632 |
UniProt: | Q86YD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.67e-18 | 250 |
mesodermal cell | 1.09e-16 | 121 |
electrically responsive cell | 3.97e-14 | 61 |
electrically active cell | 3.97e-14 | 61 |
muscle cell | 1.54e-11 | 55 |
muscle precursor cell | 7.05e-11 | 58 |
myoblast | 7.05e-11 | 58 |
multi-potent skeletal muscle stem cell | 7.05e-11 | 58 |
smooth muscle cell | 4.14e-10 | 43 |
smooth muscle myoblast | 4.14e-10 | 43 |
vascular associated smooth muscle cell | 5.22e-09 | 32 |
neurectodermal cell | 1.53e-08 | 59 |
ectodermal cell | 3.47e-07 | 72 |
lining cell | 7.30e-07 | 58 |
barrier cell | 7.30e-07 | 58 |