FFCP PHASE1:Hg19::chr3:105085587..105085610,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=214 | |EntrezGene=214 | ||
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|UniProt=B4DTU0,Q13740,B3KNN9,Q6PEY4 | |UniProt=B4DTU0,Q13740,B3KNN9,Q6PEY4 | ||
|association_with_transcript=30bp_to_NM_001243280,NM_001243281,NM_001243283,NM_001627_5end | |association_with_transcript=30bp_to_NM_001243280,NM_001243281,NM_001243283,NM_001627_5end | ||
|cluster_id=chr3:105085587..105085610,+ | |||
|coexpression_cluster_id=C1916 | |coexpression_cluster_id=C1916 | ||
|description=CAGE_peak_3_at_ALCAM_5end | |description=CAGE_peak_3_at_ALCAM_5end |
Latest revision as of 09:11, 19 September 2015
Short description: | p3@ALCAM |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALCAM_5end |
Coexpression cluster: | C1916_Fibroblast_amniotic_Adipocyte_Smooth_immature_CD14_normal |
Association with transcript: | 30bp_to_NM_001243280, NM_001243281, NM_001243283, NM_001627_5end |
EntrezGene: | ALCAM |
HGNC: | 400 |
UniProt: | B4DTU0Q13740B3KNN9Q6PEY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@ALCAM |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural tube | 1.73e-17 | 56 |
neural rod | 1.73e-17 | 56 |
future spinal cord | 1.73e-17 | 56 |
neural keel | 1.73e-17 | 56 |
neural plate | 3.63e-16 | 82 |
presumptive neural plate | 3.63e-16 | 82 |
regional part of nervous system | 4.47e-16 | 53 |
regional part of brain | 4.47e-16 | 53 |
brain | 4.53e-16 | 68 |
future brain | 4.53e-16 | 68 |
Showing 1 to 10 of 43 entries