FFCP PHASE1:Hg19::chr3:105085587..105085610,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=214 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=400 | |||
|TSSclassifier=strong | |||
|UniProt=B4DTU0,Q13740,B3KNN9,Q6PEY4 | |||
|association_with_transcript=30bp_to_NM_001243280,NM_001243281,NM_001243283,NM_001627_5end | |||
|cluster_id=chr3:105085587..105085610,+ | |||
|coexpression_cluster_id=C1916 | |||
|description=CAGE_peak_3_at_ALCAM_5end | |||
|id=chr3:105085587..105085610,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.23e-08!180;CL:0000057!3.30e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.33e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.20e-16!57;UBERON:0005068!2.20e-16!57;UBERON:0006241!2.20e-16!57;UBERON:0007135!2.20e-16!57;UBERON:0002616!7.10e-16!59;UBERON:0000033!1.66e-15!123;UBERON:0000955!4.03e-15!69;UBERON:0006238!4.03e-15!69;UBERON:0003075!3.01e-14!86;UBERON:0007284!3.01e-14!86;UBERON:0000073!4.14e-14!94;UBERON:0001016!4.14e-14!94;UBERON:0000153!1.67e-13!129;UBERON:0007811!1.67e-13!129;UBERON:0001017!1.91e-13!82;UBERON:0002346!1.99e-13!90;UBERON:0005743!2.10e-13!86;UBERON:0002780!3.69e-13!41;UBERON:0001890!3.69e-13!41;UBERON:0006240!3.69e-13!41;UBERON:0003080!8.47e-13!42;UBERON:0000468!1.03e-12!659;UBERON:0002020!3.07e-12!34;UBERON:0003528!3.07e-12!34;UBERON:0001893!5.92e-12!34;UBERON:0004121!7.94e-12!169;UBERON:0003056!1.07e-11!61;UBERON:0002791!1.23e-11!33;UBERON:0000025!1.74e-11!194;UBERON:0000924!2.02e-11!173;UBERON:0006601!2.02e-11!173;UBERON:0001869!5.14e-11!32;UBERON:0000467!8.86e-11!625;UBERON:0000480!1.51e-10!626;UBERON:0000475!1.93e-10!365;UBERON:0000477!4.10e-10!286;UBERON:0000062!6.95e-10!511;UBERON:0002050!8.35e-10!605;UBERON:0005423!8.35e-10!605;UBERON:0000923!9.08e-10!604;UBERON:0005291!9.08e-10!604;UBERON:0006598!9.08e-10!604;UBERON:0002532!9.08e-10!604;UBERON:0004111!2.77e-09!241;UBERON:0000922!5.55e-09!612;UBERON:0000956!3.34e-08!25;UBERON:0000203!3.34e-08!25;UBERON:0002619!2.57e-07!22;UBERON:0001950!5.80e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;5.36e-11;34!UBERON:0002020;5.36e-11;34!UBERON:0001893;8.17e-11;34!UBERON:0002791;1.51e-10;32!UBERON:0001869;1.95e-10;32!UBERON:0002780;3.07e-10;41!UBERON:0001890;3.07e-10;41!UBERON:0000073;5.70e-10;53!UBERON:0002616;5.70e-10;53!UBERON:0000956;1.65e-08;25!UBERON:0000203;1.65e-08;25!UBERON:0000955;9.54e-08;68!UBERON:0002619;1.47e-07;22!UBERON:0001950;3.19e-07;20!UBERON:0001017;3.43e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.73e-17,56;UBERON:0005068,1.73e-17,56;UBERON:0006241,1.73e-17,56;UBERON:0007135,1.73e-17,56;UBERON:0003075,3.63e-16,82;UBERON:0007284,3.63e-16,82;UBERON:0000073,4.47e-16,53;UBERON:0002616,4.47e-16,53;UBERON:0000955,4.53e-16,68;UBERON:0006238,4.53e-16,68;UBERON:0002346,4.19e-15,86;UBERON:0001016,1.11e-14,89;UBERON:0001017,6.09e-14,81;UBERON:0002780,1.36e-13,41;UBERON:0001890,1.36e-13,41;UBERON:0003080,1.36e-13,41;UBERON:0006240,1.36e-13,41;UBERON:0010314,1.65e-13,132;UBERON:0003056,4.29e-13,61;UBERON:0003528,1.22e-12,34;UBERON:0002020,1.22e-12,34;UBERON:0001893,2.41e-12,34;UBERON:0002791,1.65e-11,32;UBERON:0001869,2.27e-11,32;UBERON:0000025,4.90e-11,192;UBERON:0004121,6.30e-11,171;UBERON:0000924,6.30e-11,171;UBERON:0006601,6.30e-11,171;UBERON:0010371,1.15e-09,104;UBERON:0005423,2.11e-09,581;UBERON:0002050,3.55e-09,564;UBERON:0000923,5.46e-09,560;UBERON:0010316,5.46e-09,560;UBERON:0005291,5.46e-09,560;UBERON:0006598,5.46e-09,560;UBERON:0010317,5.46e-09,560;UBERON:0002532,5.46e-09,560;UBERON:0004111,1.08e-08,240;UBERON:0000956,1.88e-08,25;UBERON:0000203,1.88e-08,25;UBERON:0000922,5.86e-08,592;UBERON:0002619,1.56e-07,22;UBERON:0001950,3.63e-07,20 | |||
|phase1_expression=43.0577758871219,20.1254492457524,38.903415530488,16.0117277365009,5.81049422755474,14.8297549097063,0,0.631719873426831,0,2.45733936501509,0.697801167972428,7.42700665242586,0.791300934685361,4.08428964768154,2.31978163009541,8.0679017574213,4.21886169616784,2.19093027116212,2.43966399395253,5.54044761345546,3.4680117511523,5.64218498660558,4.00730381983479,8.6230887795917,7.65810101528297,1.37544130346312,1.9704141467987,1.81034797021462,0.786728553697808,0.767658796194425,1.54816123316076,1.83884244895785,0.30120591877825,0.369754010166788,1.62681121218633,1.27952309238679,0.880801318004542,1.10799081706375,1.00272223735071,3.25516306073778,0.671746422719773,0.971680998056939,1.03030227053675,1.16318591023652,4.91238726795452,3.15359279544161,6.27558399645349,15.6243797448294,14.5561994320699,2.58923153089935,4.35473201099471,5.20260905754887,11.3766074643084,18.0735711403471,18.9597081232078,1.50593871634084,4.63940455098338,5.61808711112712,7.65209730927256,14.1208771913481,8.95071976118658,0.659702600373432,2.19410023383795,1.70489900213078,15.9615081245721,19.2910976394988,30.5182902007832,3.26623264833766,5.21482918420201,7.38442071997397,10.8971910474006,40.1422623226445,26.8993029324752,0.422510572623884,0.425208599930087,0.628975936525128,0.44931452458598,0.450530678524519,0.16072558669708,0,0,0.365328307529268,0,0.546138611262131,0,1.70692089026603,0,0.574752439954483,0,0,1.1384259382189,0.587237189370939,0.764546456250458,2.64342657158052,1.12101712596307,0.526768169550154,0.983548850569165,0,0,0,0,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0.541607727530031,0,0.130059347559878,0.328875809207352,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0.201606743224732,0.534880391567015,0.289648807765598,0,0,1.15076305659177,4.69870898099936,10.0267582127178,4.63508860674636,4.7717156823066,8.27279279514481,38.4756705857756,21.0642927589436,23.5397225657578,2.48860243445654,0,0,11.3591587779139,12.363211348248,12.3650903282545,3.10037811596945,2.85997455390064,1.11437250398869,2.58391129576717,2.58070378531837,2.08284300964557,3.95715559346807,1.67799774483962,1.92582629358047,3.34391946458897,0.258416759169329,2.13459757612026,1.33888245105868,0,0.760272105718513,0.488124115096339,2.20597848207521,1.62028389576352,2.23249320710199,1.79623498100936,2.0270066486998,1.53316637465883,0.949265659568129,0.732806975721629,1.31780417436063,7.75560528296651,0.436094052142534,2.48485975847659,9.49728837484348,5.95841313659485,32.6993747653648,8.51204117276057,5.60677600142307,3.20246987189115,2.71334303258876,1.55605517699883,4.31074150623002,3.59616186849609,3.78393569112329,3.45705554687999,1.40592859100278,0.312160076830321,0,0.747243402759005,2.70099346880659,1.94247533241758,2.38766371393822,2.65400422631361,2.45668634623536,1.34323515528495,1.18800285728205,1.7308685049499,1.82032272387605,0,3.19838616512726,3.87867411603089,5.54128230968366,11.8523957637826,4.29082914118628,5.70904623845068,5.67160915800105,24.5763800893741,8.11518077510556,4.87443372666992,29.7090185123558,4.225153698776,8.75977836155139,8.37525853492154,20.928265197917,14.5181137690186,16.9130628743557,1.74894807420369,0.969876340912871,44.7312086570934,16.4225920111054,8.81715080014536,2.31913023795956,1.36373060295417,2.86804595389004,0.243947412259191,0.397589304964456,0.464775771478074,1.14027160516907,1.26160425437814,0.72995471815166,6.25798129319264,2.57296375277154,11.0507937081984,0.928735856063958,0.721879481669586,0.709840800239063,1.01150814046861,0.482022059766964,1.43382164552112,1.30727666455444,0.949082476444386,0.539325232640658,1.76599318612811,1.53898862778556,0,1.40241773803446,0.8231480226628,0,2.53510069643662,2.94848165003288,1.77236972004421,0,0.245976877086227,15.9558063577629,0.219500570817251,2.24803506515239,0.301586917234893,2.22212268380471,0.325808305310325,0,10.1031939417691,8.11512834825538,17.9635302180807,1.44366447761074,0.925971025153221,1.33177906564219,0.790204397959275,3.43394464837949,3.44703808522356,25.5064649001769,10.404181360211,1.87467667973554,2.68771405118175,2.26840155587818,0.895585227028483,1.16253575405585,0.766765358330422,4.92663237895944,1.49682337822484,0.621984346622316,0.432359860250884,0.25248486685276,2.09543051164158,1.52795370223311,1.17217447210047,3.4214489204541,3.18765227380303,1.50171528921959,0.571652865261156,4.37311228946907,0.43596006883328,15.1076868791157,0.387815147273333,0,4.22651376278,3.45719551560332,5.2003718455683,3.08648849114571,7.09245660116391,3.72991050622539,1.71573592389777,1.08524321078289,1.64648067356154,4.88604276440603,2.84313558994037,4.75171123760058,0.301439377059586,1.74306691720059,1.19967589418468,2.43247561282381,0.502257091432126,8.43335757932127,11.2623682081044,18.3779097334582,5.70547620162874,18.3872259467826,12.5340556755734,14.5039380224315,0.112085143993527,0.394061520403854,0.646882724578552,0.256686072559497,0.508189248444927,1.30139853857622,0,0.837581326671744,1.27587750330633,1.49801404789436,2.99161459204025,0.414415513436035,1.8403723757871,3.50119364741774,2.44138521329762,4.15941723061614,4.46072471992904,3.31175071571263,14.7598182890819,5.71797589482666,0,4.1389228517002,14.6129631677796,6.26855173041791,1.30325421702124,0.587403472388222,0,0.206768026122887,0.431428401637234,1.28073069364133,1.5156378572313,4.99306318531491,3.93107381328584,12.6534981987576,19.7965945541601,10.1037633995906,9.35415789566617,14.3278029738677,6.59501076688791,7.42090332224955,4.47208112027701,1.59805552781814,2.46381468041427,0.519254429183621,2.32420756919918,0.120859449591622,0.40101294060657,1.38121483403844,1.49258782613989,1.0925470080403,0.393373244878272,2.25599806453706,6.16122696835318,1.56869953835371,4.38417673959782,3.9054102690364,1.13733384070897,0.680374821106063,11.4435435534134,1.54227252690289,2.70946437543853,2.00675909541941,3.3133915495855,2.49322802678617,3.80587083027703,0,0,2.3080511260475,3.60816110269676,4.88067591996455,2.16386124460217,1.28197250745681,1.48517099857058,0.574265537996172,0,4.82051789532479,1.93341436584244,3.08097234229289,1.68854042198743,3.85942402956686,1.28904293841928,0.870100163485371,2.47157219506693,0.801288320820636,1.32227932288782,1.34533047155574,4.08360679982669,1.8208400553999,0.464845549297286,17.6294914225158,6.2733354314454,16.6338133295088,5.32306030317022,2.60979897622522,5.37440235401368,5.29562080945368,8.93180086463202,4.11293252134344,3.24071329670502,0.511795582622668,2.56763392820352,3.5002357271853,3.13979456079692,1.07923474549989,1.64722217841633,2.94531005864216,2.02182481573316,4.75530963519025,0.842516912477962,0.48763373908959,6.09283724078211,3.16950440270266,1.63799893689583,0.848432591722276,1.13008116620243,3.85955740482287,4.64407282668854,7.0152141640602,1.15755106853338,0,2.63783490051515,1.8589409885985,2.53526042279017,5.30622003154991,4.42120684559045,2.49669736036875,0.354761064070598,5.69990615303693,2.30506425071931,1.89736586882858,0.699869440489966,1.53955380360819,0,0,2.16530741786592,0,0,0,0.229723400206959,0.507447609232169,0,0,0.238231775457789,0.822724546172388,1.29694662238543,0.540031437238115,0,0.106824071127473,1.92495971052672,5.14584453560167,2.41544127663434,0,0.284567373393656,0.159426272728822,4.39074617152197,0.191505370132367,0,0,0.280797178113459,0.228234679033192,0.156679895773023,0,0.169291777801603,0.963528450622197,1.21079824314629,1.27753871307098,2.06103206853459,1.22896305723383,1.11838053946208,1.33479313369527,0.19538809540204,0,0,0,0,0,6.36277837387947,8.64398257704175,1.21360521749513,0,0.284136146806413,22.2032370806052,1.48482340416319,22.1155705511447,8.94732882989668,6.75213198770461,1.33570446027487,2.80166586185491,1.26675244876796,1.59398390600856,2.48655523978033,0.503865495708552,1.1249555075237,2.09244169283818,1.24415835064723,11.3234122445632,2.86433879480975,0.511572370226872,1.67693789582787,0,14.4478087188028,5.81599647657131,6.49376687132959,5.98841394003583,0,0.962059999958153,1.44999915086959,1.137934482855,0.508507300585533,0.472775363535873,0.344743373241465,0,0.694499979733169,7.08593108651071,10.8536794762867,0,1.99042667876204,2.06883333267483,4.8264787373874,0,0.278847488557207,1.30815439456455,0.797594390929008,0,0,0,4.78501739597879,0.274792780205587,0,0,2.5116841023204,0,0,0,0,0,0,1.47698645169619,17.7923760893471,0,0,0.995261931078505,2.12298154808014,4.27721101453538,3.55825354416746,3.08909847366257,2.29728288912002,12.1322039365219,0.802577647298789,11.713222286267,0.547364367646998,3.91329237864179,0,2.36750641709634,1.20990716048664,3.36680037793539,2.33790344625405,2.85614496887536,1.65901106235595,1.32930774541437,0,0,1.19472429772959,0.284609546029793,3.74421617135474,2.42983633669183,4.40965788364699,16.2800716305353,2.09672001890436,12.554980370428,0.0967563312890851,0.292357268344742,0.328461828212837,1.26085721434945,21.4462387860346,0.90392296312213,1.64450309576101,1.78843150532691,8.35702506617599,1.17330829640882,2.88571752905521,1.49417096317547,3.19695375331408,0,0.114536596165916,12.8696248396473,0.576219191952599,1.61528296235062,0.707082103850386,5.30026403687095,3.66109962093166,1.63197148218115,1.15580235960608,9.60672461935663,9.8571872802235,0,12.8929632425987,1.8402114799552,1.95497680890578,0.458320848023367,2.87149209830726,0,0.429226048136571,0.223171457441873,2.75452237195578,2.52209918479682,0,2.28471228690949,1.81314888438566,1.41547442093788,2.36225955635397,0.76205998859206,3.97614844904652,5.17572943223987,1.12527203925513,2.06309154895851,0.83088067605837,38.0205876722036,9.2856234546954,7.95819192220123,0.670869375198532,1.18208560948797,2.25554728980492,0.528001682597033,0.179287339332845,6.14128631422225,0.714695326373367,0,0.5085370753095,1.08599920350743,2.5926644736038,1.63293680054705,10.7757172406239,0.082092520749339,5.45241669713349,0,3.95691030930823,1.32506888912221,19.9095752796788,14.2811209882105,6.33021300172019,1.40963004463334,8.43620559284788,6.28817220398664,7.45630299624952,0.992332043623902,0.197611631897944,0.60896299190448,4.46838880439127,0.544017803369474,0,1.22538230705385,0,2.98402782875445,6.2024772597689,5.36915565568638,5.38321002037949,10.3213655224213,10.7601179990747,11.1152561265076,0.691743174681154,9.62349141308221,1.06154382279153,0,0.235265819698172,0.936669811613763,0.579684114443301,1.19403842309499,1.63599316893057,3.32883516901568,2.65164207385125,3.27038272278348,0,2.28840068396924,1.36107831386915,2.17612080815893,3.69637874974085,3.50452887760145,10.3454715797629,2.48420731002015,2.07353103920428,2.12673371646396,2.08698024724694,1.05180326298053,2.28483127301277,1.62748293281865,3.09142720644351,3.22231671127465,6.49647263829891,2.3885753321917,4.00027764663154,5.83772698810748,2.69399591012735,6.30924491143255,1.73357847366573,1.92997432237433,1.56596575179127,3.62729480819636,4.16740453782901,3.67105056759701,22.027927453023,0.926404341482917,1.53498834705095,1.94358060540469,3.8582807654183,3.20990637240838,9.99341922492992,2.76344273384959,4.86175929883811,6.35988806297962,4.09206648562716,3.72021552877417,5.23409261618701,0.655219697692825,8.60205180638018,4.01493034381391,1.9998739585493,1.28030075632969,0.861074898304078,6.81019144280203,0.920529751259204,1.258915569475,1.86623178009892,1.66262682694747,6.03818943821418,0.157265941855896,5.02364335683264,3.3946505990805,0.637724760305049,2.85052257795705,7.82102885162541,11.4481566235231,0.630893960010027,7.20513673456923,2.46873160583479,15.9247648223664,9.05632073860079,2.8339315265117,7.50279137568611,12.3069818544453,5.29350562065608,6.29330997424383,5.97459888837849,28.5538840518309,3.82776102154,2.35939446695481,3.30171477339022,7.27811696747131,0.381382095467167,0,0,1.0529445968896,3.83239630536688,0,0,2.12903492763126,12.4199112422318,6.3485329541291,10.15401528198,7.02735108104026,5.96108615822724,6.01672289920042,1.64477330057155,2.48105589194647,0.175871244359621,3.70511040154826,1.07140367175657,3.02655349996942,3.03482802118316,5.69155478378244,0.620916591138472,1.03710588800201,1.71488009437418,16.9244635112311,5.91954962065642,3.78220290828698,2.55832224351759,2.04082041411336,10.8409757042041,0.280272163313789,5.47895232305697,0,0.47775168788705,0.857718530119876,0,0.464965701472501,0.173858272302579,1.60342272946051,2.48659396995644,3.0729325876911,4.83881763269864,2.15113679410139,1.53831600949735,1.53384128566484,1.27016115057279,7.3314197934096,2.48165108531456,8.5998504507969,3.80308468112494,0.98150233615243,9.26576229865248,0,0.102662806856247,0,0,3.27515248846948,2.58636007709779,0.951360726220549,0.90356865631168,0.219881033490858,0.603851374266694,2.00652811080656,0.655678681511872,0,3.67722482630858,1.41405928260976,10.600657224207,8.91139200981258,12.2570160999186,17.3325656981573,0.469919589899268,0.45120521581504,1.09935271517422,2.14264726326789,1.76447435857846,1.28386186702669,1.46067277649303,2.2936464170227,10.6071291532074,1.26217249754548,7.47906392100062,3.49080552272302,2.645134202577,2.97596014533401,6.47045880083986,3.8936390591141,0.378499274505237,0.109265571963696,0.380095503034311,1.42784361638774,0,0,0,0.985123076837112,1.33982065078089,11.6083721524229,14.1703204330796,2.13233981900981,1.42838658878244,0.322944549180031,0.682821857254437,6.95217547999803,7.0648345688763,0.808468755832877,0.653150243690884,0,0.942928742204225,4.73366555591664,1.66330178273007,7.32629417498771,9.71218847487211,0,1.88632924423832,2.34640942403454,0.855690109280065,2.03448089157869,1.99727032255654,1.00636896795513,0.641136984606466 | |||
|short_description=p3@ALCAM | |||
}} |
Latest revision as of 09:11, 19 September 2015
Short description: | p3@ALCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ALCAM_5end |
Coexpression cluster: | C1916_Fibroblast_amniotic_Adipocyte_Smooth_immature_CD14_normal |
Association with transcript: | 30bp_to_NM_001243280, NM_001243281, NM_001243283, NM_001627_5end |
EntrezGene: | ALCAM |
HGNC: | 400 |
UniProt: | B4DTU0Q13740B3KNN9Q6PEY4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.33e-07 | 76 |