FFCP PHASE1:Hg19::chrX:128872918..128872963,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:128872918..128872963,+
|short_description=p1@XPNPEP2
|description=CAGE_peak_1_at_XPNPEP2_5end
|association_with_transcript=0bp_to_ENST00000371105,NM_003399...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7512 | |EntrezGene=7512 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12823 | |HGNC=12823 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JZ40,O43895 | |UniProt=Q5JZ40,O43895 | ||
|association_with_transcript=0bp_to_ENST00000371105,NM_003399,uc004eut.1,uc011mum.1_5end | |||
|cluster_id=chrX:128872918..128872963,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_XPNPEP2_5end | |||
|id=chrX:128872918..128872963,+ | |||
|ontology_enrichment_celltype=CL:0000057!1.23e-19!75;CL:0000055!2.31e-11!180;CL:0002620!4.85e-10!23;CL:0000136!1.77e-07!15;CL:0002570!4.99e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002570;4.45e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,3.82e-08,8 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!3.52e-13!95;UBERON:0001007!2.23e-09!155;UBERON:0001555!2.23e-09!155;UBERON:0007026!2.23e-09!155;UBERON:0004119!4.46e-09!169;UBERON:0000925!4.46e-09!169;UBERON:0006595!4.46e-09!169;UBERON:0000468!7.96e-09!659;UBERON:0000475!1.39e-08!365;UBERON:0002199!1.92e-08!45;UBERON:0002416!1.92e-08!45;UBERON:0001013!3.06e-08!14;UBERON:0002100!4.22e-08!216;UBERON:0005256!4.39e-08!143;UBERON:0000481!6.08e-08!347;UBERON:0007100!6.78e-08!27;UBERON:0007023!1.75e-07!115;UBERON:0004921!3.27e-07!129;UBERON:0004185!3.27e-07!129;UBERON:0002097!5.16e-07!40;UBERON:0000479!9.92e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;4.55e-09;14!UBERON:0007100;3.83e-08;25!UBERON:0004457;2.96e-07;9!UBERON:0000042;2.96e-07;9!UBERON:0000948;5.11e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,4.06e-09,14;UBERON:0007100,1.67e-08,27;UBERON:0005256,4.64e-08,122;UBERON:0003103,1.92e-07,68;UBERON:0000948,2.24e-07,24;UBERON:0005498,2.24e-07,24;UBERON:0004140,2.24e-07,24;UBERON:0009881,2.24e-07,24;UBERON:0004141,2.24e-07,24;UBERON:0003084,2.24e-07,24;UBERON:0007005,2.24e-07,24;UBERON:0004139,2.24e-07,24;UBERON:0004291,2.24e-07,24;UBERON:0007023,4.17e-07,114;UBERON:0003104,7.45e-07,160;UBERON:0009142,7.45e-07,160 | |||
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| ||
|short_description=p1@XPNPEP2 | |||
}} | }} |
Latest revision as of 09:08, 19 September 2015
Short description: | p1@XPNPEP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_XPNPEP2_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000371105, NM_003399, uc004eut.1, uc011mum.1_5end |
EntrezGene: | XPNPEP2 |
HGNC: | 12823 |
UniProt: | Q5JZ40O43895 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 3.82e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 4.06e-09 | 14 |
primary circulatory organ | 1.67e-08 | 27 |
trunk mesenchyme | 4.64e-08 | 122 |
compound organ | 1.92e-07 | 68 |
heart | 2.24e-07 | 24 |
primitive heart tube | 2.24e-07 | 24 |
primary heart field | 2.24e-07 | 24 |
anterior lateral plate mesoderm | 2.24e-07 | 24 |
heart tube | 2.24e-07 | 24 |
heart primordium | 2.24e-07 | 24 |
cardiac mesoderm | 2.24e-07 | 24 |
cardiogenic plate | 2.24e-07 | 24 |
heart rudiment | 2.24e-07 | 24 |
adult organism | 4.17e-07 | 114 |
mesenchyme | 7.45e-07 | 160 |
entire embryonic mesenchyme | 7.45e-07 | 160 |