FFCP PHASE1:Hg19::chr22:23922502..23922515,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3543 | |EntrezGene=3543 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5870 | |HGNC=5870 | ||
|TSSclassifier=strong | |||
|UniProt=P15814,Q0P681 | |UniProt=P15814,Q0P681 | ||
|association_with_transcript=-7bp_to_ENST00000330377,NM_020070,NM_152855,uc002zxd.2,uc002zxe.2_5end | |association_with_transcript=-7bp_to_ENST00000330377,NM_020070,NM_152855,uc002zxd.2,uc002zxe.2_5end | ||
|cluster_id=chr22:23922502..23922515,- | |||
|coexpression_cluster_id=C2075 | |||
|description=CAGE_peak_3_at_IGLL1_5end | |description=CAGE_peak_3_at_IGLL1_5end | ||
|id=chr22:23922502..23922515,- | |id=chr22:23922502..23922515,- | ||
|ontology_enrichment_celltype=CL:0000037!1.60e-12!172;CL:0000566!1.60e-12!172;CL:0000988!1.68e-11!182;CL:0002032!6.31e-11!165;CL:0000837!6.31e-11!165;CL:0000764!2.25e-09!2;CL:0000765!2.25e-09!2;CL:0000050!2.25e-09!2;CL:0000038!2.25e-09!2;CL:0000558!2.25e-09!2;CL:0000547!2.25e-09!2;CL:0000549!2.25e-09!2;CL:0000550!2.25e-09!2;CL:0000552!2.25e-09!2;CL:0000763!1.37e-08!112;CL:0000049!1.37e-08!112;CL:0000817!2.59e-07!3 | |ontology_enrichment_celltype=CL:0000037!1.60e-12!172;CL:0000566!1.60e-12!172;CL:0000988!1.68e-11!182;CL:0002032!6.31e-11!165;CL:0000837!6.31e-11!165;CL:0000764!2.25e-09!2;CL:0000765!2.25e-09!2;CL:0000050!2.25e-09!2;CL:0000038!2.25e-09!2;CL:0000558!2.25e-09!2;CL:0000547!2.25e-09!2;CL:0000549!2.25e-09!2;CL:0000550!2.25e-09!2;CL:0000552!2.25e-09!2;CL:0000763!1.37e-08!112;CL:0000049!1.37e-08!112;CL:0000817!2.59e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000817;8.67e-10;1!CL:0000037;9.43e-10;1!CL:0001024;9.43e-10;1!CL:0002032;1.43e-09;1!CL:0000557;1.43e-09;1!CL:0000785;1.56e-09;1!CL:0000819;1.56e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,4.86e-12,3;CL:0000037,1.07e-10,168;CL:0000988,5.34e-10,177;CL:0002032,8.65e-10,161;CL:0000837,8.65e-10,161;CL:0001024,9.44e-10,1;CL:0000819,1.56e-09,1;CL:0000763,4.94e-07,108;CL:0000049,4.94e-07,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1240!4.38e-41!39;DOID:2531!5.66e-41!51;DOID:0060083!5.66e-41!51;DOID:8692!4.20e-29!31;DOID:0050686!1.08e-11!137;DOID:0060058!2.97e-07!10 | |ontology_enrichment_disease=DOID:1240!4.38e-41!39;DOID:2531!5.66e-41!51;DOID:0060083!5.66e-41!51;DOID:8692!4.20e-29!31;DOID:0050686!1.08e-11!137;DOID:0060058!2.97e-07!10 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.31e-26;39!DOID:2531;4.25e-24;51!DOID:0060083;4.25e-24;51!DOID:8692;4.46e-23;31!DOID:9119;1.12e-09;1!DOID:0060073;1.56e-09;1!DOID:8675;1.56e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.28e-32,51;DOID:0060083,1.28e-32,51;DOID:1240,2.43e-32,39;DOID:8692,4.30e-24,31;DOID:0050686,2.32e-10,137;DOID:9119,1.12e-09,1;DOID:0060073,1.56e-09,1;DOID:8675,1.56e-09,1 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.99e-16;2!UBERON:0005058;1.99e-16;2!UBERON:0009113;1.99e-16;2!UBERON:0004177;4.16e-07;5!UBERON:0005057;4.16e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.08e-08,4;UBERON:0005058,1.08e-08,4;UBERON:0009113,1.08e-08,4;UBERON:0003295,1.08e-08,4;UBERON:0005562,1.08e-08,4 | |||
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| ||
|short_description=p3@IGLL1 | |short_description=p3@IGLL1 | ||
}} | }} |
Latest revision as of 09:04, 19 September 2015
Short description: | p3@IGLL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IGLL1_5end |
Coexpression cluster: | C2075_non_acute_CD133_CD34_granulocyte_diffuse_Burkitt |
Association with transcript: | -7bp_to_ENST00000330377, NM_020070, NM_152855, uc002zxd.2, uc002zxe.2_5end |
EntrezGene: | IGLL1 |
HGNC: | 5870 |
UniProt: | P15814Q0P681 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 4.86e-12 | 3 |
hematopoietic stem cell | 1.07e-10 | 168 |
hematopoietic cell | 5.34e-10 | 177 |
hematopoietic oligopotent progenitor cell | 8.65e-10 | 161 |
hematopoietic multipotent progenitor cell | 8.65e-10 | 161 |
CD34-positive, CD38-negative hematopoietic stem cell | 9.44e-10 | 1 |
B-1 B cell | 1.56e-09 | 1 |
myeloid cell | 4.94e-07 | 108 |
common myeloid progenitor | 4.94e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.08e-08 | 4 |
hemolymphoid system gland | 1.08e-08 | 4 |
thymic region | 1.08e-08 | 4 |
pharyngeal gland | 1.08e-08 | 4 |
thymus primordium | 1.08e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.28e-32 | 51 |
immune system cancer | 1.28e-32 | 51 |
leukemia | 2.43e-32 | 39 |
myeloid leukemia | 4.30e-24 | 31 |
organ system cancer | 2.32e-10 | 137 |
acute myeloid leukemia | 1.12e-09 | 1 |
lymphatic system cancer | 1.56e-09 | 1 |
lymphosarcoma | 1.56e-09 | 1 |