FFCP PHASE1:Hg19::chr10:76970379..76970388,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:76970379..76970388,+
|short_description=p4@VDAC2
|description=CAGE_peak_4_at_VDAC2_5end
|association_with_transcript=-14bp_to_ENST00000344036_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7417 | |EntrezGene=7417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12672 | |HGNC=12672 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSD2 | |UniProt=Q5JSD2 | ||
|association_with_transcript=-14bp_to_ENST00000344036_5end | |||
|cluster_id=chr10:76970379..76970388,+ | |||
|description=CAGE_peak_4_at_VDAC2_5end | |||
|id=chr10:76970379..76970388,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.66e-23!248;CL:0000220!3.06e-23!246;CL:0000222!1.13e-19!119;CL:0000680!8.31e-16!57;CL:0000056!8.31e-16!57;CL:0000355!8.31e-16!57;CL:0000393!2.66e-15!60;CL:0000211!2.66e-15!60;CL:0000192!3.30e-15!42;CL:0000514!3.30e-15!42;CL:0000055!5.74e-15!180;CL:0000187!7.35e-15!54;CL:0000548!4.29e-14!679;CL:0000004!4.29e-14!679;CL:0000255!4.29e-14!679;CL:0000359!8.21e-14!32;CL:0000012!3.64e-13!682;CL:0000183!3.95e-13!59;CL:0000144!1.92e-11!625;CL:0002371!1.92e-09!591;CL:0000066!2.82e-08!254;CL:0000003!8.39e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.98e-16;32!CL:0000192;3.43e-12;43!CL:0000187;2.16e-08;55!CL:0002539;3.42e-08;10!CL:0000393;3.87e-07;61!CL:0000211;3.87e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,7.79e-22,250;CL:0000222,6.52e-20,121;CL:0000359,1.60e-17,32;CL:0000192,1.75e-17,43;CL:0000514,1.75e-17,43;CL:0000680,5.15e-17,58;CL:0000056,5.15e-17,58;CL:0000355,5.15e-17,58;CL:0000187,2.65e-16,55;CL:0000393,5.08e-16,61;CL:0000211,5.08e-16,61;CL:0002539,4.61e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.43e-12;43!CL:0000355;5.06e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.12e-18!82;UBERON:0000914!2.56e-16!83;UBERON:0002329!2.56e-16!83;UBERON:0003077!2.56e-16!83;UBERON:0003059!2.56e-16!83;UBERON:0007282!2.56e-16!83;UBERON:0009618!2.56e-16!83;UBERON:0007285!2.56e-16!83;UBERON:0004290!1.32e-14!70;UBERON:0001134!2.20e-14!61;UBERON:0002036!2.20e-14!61;UBERON:0003082!2.20e-14!61;UBERON:0002385!8.55e-14!63;UBERON:0001015!8.55e-14!63;UBERON:0000383!8.55e-14!63;UBERON:0005256!9.71e-14!143;UBERON:0001637!2.33e-13!42;UBERON:0003509!2.33e-13!42;UBERON:0004572!2.33e-13!42;UBERON:0000490!7.85e-13!138;UBERON:0002100!5.09e-12!216;UBERON:0002049!6.63e-12!79;UBERON:0007798!6.63e-12!79;UBERON:0004872!1.89e-11!84;UBERON:0003104!3.34e-11!238;UBERON:0009142!3.34e-11!238;UBERON:0000055!3.40e-11!69;UBERON:0001981!3.46e-11!60;UBERON:0007500!3.46e-11!60;UBERON:0004537!3.46e-11!60;UBERON:0006965!3.46e-11!60;UBERON:0004573!7.12e-10!33;UBERON:0004571!7.12e-10!33;UBERON:0004535!4.93e-09!110;UBERON:0003914!7.16e-09!118;UBERON:0000119!1.23e-08!312;UBERON:0001009!1.99e-08!113;UBERON:0000481!2.27e-08!347;UBERON:0000475!2.78e-08!365;UBERON:0000483!3.49e-08!309;UBERON:0003102!6.60e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.40e-11;42!UBERON:0003509;2.40e-11;42!UBERON:0004572;2.40e-11;42!UBERON:0004573;1.37e-10;33!UBERON:0004571;1.37e-10;33!UBERON:0004237;3.42e-08;10!UBERON:0004695;3.42e-08;10!UBERON:0002111;3.42e-08;10!UBERON:0004178;3.42e-08;10!UBERON:0007500;7.01e-08;56!UBERON:0001981;7.01e-08;56!UBERON:0004537;7.01e-08;56!UBERON:0000055;2.92e-07;65 | |||
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| ||
|short_description=p4@VDAC2 | |||
}} | }} |
Latest revision as of 09:04, 19 September 2015
Short description: | p4@VDAC2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VDAC2_5end |
Coexpression cluster: | NA |
Association with transcript: | -14bp_to_ENST00000344036_5end |
EntrezGene: | VDAC2 |
HGNC: | 12672 |
UniProt: | Q5JSD2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 7.79e-22 | 250 |
mesodermal cell | 6.52e-20 | 121 |
vascular associated smooth muscle cell | 1.60e-17 | 32 |
smooth muscle cell | 1.75e-17 | 43 |
smooth muscle myoblast | 1.75e-17 | 43 |
muscle precursor cell | 5.15e-17 | 58 |
myoblast | 5.15e-17 | 58 |
multi-potent skeletal muscle stem cell | 5.15e-17 | 58 |
muscle cell | 2.65e-16 | 55 |
electrically responsive cell | 5.08e-16 | 61 |
electrically active cell | 5.08e-16 | 61 |
aortic smooth muscle cell | 4.61e-08 | 10 |