FFCP PHASE1:Hg19::chr4:90816544..90816555,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22915 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7178 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=421bp_to_AB385146,HQ258009_5end | |||
|cluster_id=chr4:90816544..90816555,+ | |||
|coexpression_cluster_id=C112 | |||
|description=CAGE_peak_9_at_MMRN1_5end | |||
|id=chr4:90816544..90816555,+ | |||
|ontology_enrichment_celltype=CL:0002139!4.48e-28!24;CL:0000115!3.45e-18!35;CL:0005020!3.03e-16!6;CL:0002138!3.03e-16!6;CL:0005022!3.03e-16!6;CL:0000071!1.82e-15!18;CL:0002546!1.82e-15!18;CL:0002078!8.60e-14!44;CL:0000784!9.87e-13!3;CL:0002618!5.47e-12!3;CL:0002544!1.18e-10!6;CL:1000413!1.60e-10!9;CL:0002543!3.71e-10!6;CL:0000213!6.47e-10!57;CL:0000215!6.47e-10!57;CL:0002545!8.75e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000784;1.27e-33;3!CL:0000451;6.06e-10;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,9.10e-34,3;CL:0000451,5.54e-10,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!1.82e-15!18;UBERON:0004638!1.82e-15!18;UBERON:0004852!1.82e-15!18;UBERON:0002465!3.07e-13!10;UBERON:0000487!2.42e-12!22;UBERON:0001473!4.24e-12!8;UBERON:0004536!4.24e-12!8;UBERON:0006558!4.24e-12!8;UBERON:0006914!1.17e-10!25;UBERON:0003915!1.60e-10!9;UBERON:0004700!1.60e-10!9;UBERON:0001917!1.60e-10!9;UBERON:0007023!1.37e-09!115;UBERON:0000055!6.46e-09!69;UBERON:0005800!8.75e-09!2;UBERON:0001515!8.75e-09!2;UBERON:0002049!2.26e-07!79;UBERON:0007798!2.26e-07!79;UBERON:0002066!2.35e-07!5;UBERON:0001638!8.86e-07!9;UBERON:0003920!8.86e-07!9;UBERON:0004582!8.86e-07!9 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.164201178899891,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,1.14398982156026,1.48583000531826,0.39752481473341,0,0,1.13061588384802,0,0,0.208994966536811,0.516833518338658,0.35576626268671,1.33888245105868,0,0,0,0.367663080345869,0.81014194788176,0.535798369704479,0.22452937262617,0.337834441449967,0,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.433099343283221,0,0.951270761172991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.677167111206413,0,0,0,0,0,0,0,0,2.22724939116194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0.31900115973192,0,0,0,1.09886179476517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0,0.442306057399416,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,6.98673236612086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0.535701835878287,0,0,0,0.0887023701626388,0.115233987555779,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,2.90603563420313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,0,0,0,0,0,0,0.190941474834495,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p9@MMRN1 | |||
}} |
Latest revision as of 09:01, 19 September 2015
Short description: | p9@MMRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_MMRN1_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | 421bp_to_AB385146, HQ258009_5end |
EntrezGene: | MMRN1 |
HGNC: | 7178 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 9.10e-34 | 3 |
dendritic cell | 5.54e-10 | 10 |