FFCP PHASE1:Hg19::chr5:95998070..95998099,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |EntrezGene=831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |HGNC=1515 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000507487,ENST00000515160_5end | |association_with_transcript=-7bp_to_ENST00000507487,ENST00000515160_5end | ||
|cluster_id=chr5:95998070..95998099,+ | |||
|description=CAGE_peak_3_at_CAST_5end | |description=CAGE_peak_3_at_CAST_5end | ||
|id=chr5:95998070..95998099,+ | |id=chr5:95998070..95998099,+ | ||
|ontology_enrichment_celltype=CL:0000860!1.27e-21!45;CL:0002057!1.38e-20!42;CL:0000766!1.59e-11!76;CL:0002009!4.73e-11!65;CL:0000557!5.37e-11!71;CL:0002194!1.08e-10!63;CL:0000576!1.08e-10!63;CL:0000040!1.08e-10!63;CL:0000559!1.08e-10!63;CL:0000839!7.95e-10!70;CL:0000055!6.99e-07!180 | |ontology_enrichment_celltype=CL:0000860!1.27e-21!45;CL:0002057!1.38e-20!42;CL:0000766!1.59e-11!76;CL:0002009!4.73e-11!65;CL:0000557!5.37e-11!71;CL:0002194!1.08e-10!63;CL:0000576!1.08e-10!63;CL:0000040!1.08e-10!63;CL:0000559!1.08e-10!63;CL:0000839!7.95e-10!70;CL:0000055!6.99e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.00e-17;33!CL:0002057;4.00e-17;33!CL:0000473;3.70e-11;39!CL:0000234;3.70e-11;39!CL:0000576;1.69e-10;48!CL:0000766;6.68e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.27e-20,42;CL:0002057,1.27e-20,42;CL:0000473,1.83e-16,48;CL:0000234,1.83e-16,48;CL:0000766,2.58e-10,72;CL:0002009,8.08e-10,61;CL:0000557,8.66e-10,67;CL:0002194,1.82e-09,59;CL:0000576,1.82e-09,59;CL:0000040,1.82e-09,59;CL:0000559,1.82e-09,59;CL:0000839,9.44e-09,66 | |||
|ontology_enrichment_development_v019=CL:0002057;3.87e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000926!4.55e-24!448;UBERON:0004120!4.55e-24!448;UBERON:0006603!4.55e-24!448;UBERON:0002204!1.04e-18!167;UBERON:0000468!2.56e-17!659;UBERON:0000467!2.77e-17!625;UBERON:0000480!3.71e-17!626;UBERON:0002050!3.81e-12!605;UBERON:0005423!3.81e-12!605;UBERON:0000923!4.15e-12!604;UBERON:0005291!4.15e-12!604;UBERON:0006598!4.15e-12!604;UBERON:0002532!4.15e-12!604;UBERON:0000062!1.14e-11!511;UBERON:0000922!2.44e-11!612;UBERON:0004765!3.92e-11!101;UBERON:0001434!3.92e-11!101;UBERON:0003081!9.34e-11!216;UBERON:0002371!1.01e-10!80;UBERON:0001474!1.29e-09!86;UBERON:0000914!3.61e-08!83;UBERON:0002329!3.61e-08!83;UBERON:0003077!3.61e-08!83;UBERON:0003059!3.61e-08!83;UBERON:0007282!3.61e-08!83;UBERON:0009618!3.61e-08!83;UBERON:0007285!3.61e-08!83;UBERON:0002390!4.50e-07!102;UBERON:0003061!4.50e-07!102;UBERON:0003104!6.31e-07!238;UBERON:0009142!6.31e-07!238;UBERON:0004290!6.51e-07!70;UBERON:0002193!6.62e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.00e-18,167;UBERON:0000926,6.85e-17,315;UBERON:0004120,6.85e-17,315;UBERON:0006603,6.85e-17,315;UBERON:0002050,8.87e-11,564;UBERON:0003081,1.23e-10,203;UBERON:0000923,1.71e-10,560;UBERON:0010316,1.71e-10,560;UBERON:0005291,1.71e-10,560;UBERON:0006598,1.71e-10,560;UBERON:0010317,1.71e-10,560;UBERON:0002532,1.71e-10,560;UBERON:0001434,1.99e-10,100;UBERON:0005423,1.47e-09,581;UBERON:0002371,1.56e-09,76;UBERON:0004765,2.21e-09,90;UBERON:0000922,3.63e-09,592;UBERON:0001474,1.54e-08,82;UBERON:0002329,2.52e-07,71;UBERON:0003059,2.52e-07,71;UBERON:0007282,2.52e-07,71;UBERON:0004290,2.52e-07,71;UBERON:0009618,2.52e-07,71;UBERON:0002385,3.98e-07,64;UBERON:0001015,3.98e-07,64;UBERON:0000383,3.98e-07,64;UBERON:0007524,4.14e-07,73;UBERON:0003077,4.85e-07,72;UBERON:0007285,4.85e-07,72;UBERON:0002405,5.42e-07,93;UBERON:0001134,8.31e-07,62;UBERON:0002036,8.31e-07,62;UBERON:0003082,8.31e-07,62 | |||
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| ||
|short_description=p3@CAST | |short_description=p3@CAST | ||
}} | }} |
Latest revision as of 08:59, 19 September 2015
Short description: | p3@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CAST_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000507487, ENST00000515160_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.27e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-20 | 42 |
defensive cell | 1.83e-16 | 48 |
phagocyte | 1.83e-16 | 48 |
myeloid leukocyte | 2.58e-10 | 72 |
macrophage dendritic cell progenitor | 8.08e-10 | 61 |
granulocyte monocyte progenitor cell | 8.66e-10 | 67 |
monopoietic cell | 1.82e-09 | 59 |
monocyte | 1.82e-09 | 59 |
monoblast | 1.82e-09 | 59 |
promonocyte | 1.82e-09 | 59 |
myeloid lineage restricted progenitor cell | 9.44e-09 | 66 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.00e-18 | 167 |
mesoderm | 6.85e-17 | 315 |
mesoderm-derived structure | 6.85e-17 | 315 |
presumptive mesoderm | 6.85e-17 | 315 |
embryonic structure | 8.87e-11 | 564 |
lateral plate mesoderm | 1.23e-10 | 203 |
germ layer | 1.71e-10 | 560 |
germ layer / neural crest | 1.71e-10 | 560 |
embryonic tissue | 1.71e-10 | 560 |
presumptive structure | 1.71e-10 | 560 |
germ layer / neural crest derived structure | 1.71e-10 | 560 |
epiblast (generic) | 1.71e-10 | 560 |
skeletal system | 1.99e-10 | 100 |
developing anatomical structure | 1.47e-09 | 581 |
bone marrow | 1.56e-09 | 76 |
skeletal element | 2.21e-09 | 90 |
embryo | 3.63e-09 | 592 |
bone element | 1.54e-08 | 82 |
somite | 2.52e-07 | 71 |
presomitic mesoderm | 2.52e-07 | 71 |
presumptive segmental plate | 2.52e-07 | 71 |
dermomyotome | 2.52e-07 | 71 |
trunk paraxial mesoderm | 2.52e-07 | 71 |
muscle tissue | 3.98e-07 | 64 |
musculature | 3.98e-07 | 64 |
musculature of body | 3.98e-07 | 64 |
dense mesenchyme tissue | 4.14e-07 | 73 |
paraxial mesoderm | 4.85e-07 | 72 |
presumptive paraxial mesoderm | 4.85e-07 | 72 |
immune system | 5.42e-07 | 93 |
skeletal muscle tissue | 8.31e-07 | 62 |
striated muscle tissue | 8.31e-07 | 62 |
myotome | 8.31e-07 | 62 |