FFCP PHASE1:Hg19::chr5:95998018..95998059,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |EntrezGene=831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |HGNC=1515 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-47bp_to_ENST00000507487,ENST00000515160_5end | |association_with_transcript=-47bp_to_ENST00000507487,ENST00000515160_5end | ||
|cluster_id=chr5:95998018..95998059,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_4_at_CAST_5end | |description=CAGE_peak_4_at_CAST_5end | ||
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|ontology_enrichment_celltype=CL:0002057!1.54e-27!42;CL:0000860!1.57e-26!45;CL:0000766!1.39e-21!76;CL:0000738!6.86e-20!140;CL:0000557!1.31e-19!71;CL:0002009!2.36e-18!65;CL:0002194!8.15e-18!63;CL:0000576!8.15e-18!63;CL:0000040!8.15e-18!63;CL:0000559!8.15e-18!63;CL:0000839!1.16e-17!70;CL:0002087!6.13e-16!119;CL:0002031!8.27e-16!124;CL:0002371!2.25e-11!591;CL:0000048!3.74e-09!430;CL:0000723!7.29e-09!436;CL:0002320!2.29e-08!365;CL:0000134!6.17e-08!358;CL:0000034!1.08e-07!444;CL:0000144!1.21e-07!625;CL:0002139!1.22e-07!24;CL:0000063!2.39e-07!578;CL:0000012!3.91e-07!682;CL:0000548!3.99e-07!679;CL:0000004!3.99e-07!679;CL:0000255!3.99e-07!679;CL:0000003!4.74e-07!722 | |ontology_enrichment_celltype=CL:0002057!1.54e-27!42;CL:0000860!1.57e-26!45;CL:0000766!1.39e-21!76;CL:0000738!6.86e-20!140;CL:0000557!1.31e-19!71;CL:0002009!2.36e-18!65;CL:0002194!8.15e-18!63;CL:0000576!8.15e-18!63;CL:0000040!8.15e-18!63;CL:0000559!8.15e-18!63;CL:0000839!1.16e-17!70;CL:0002087!6.13e-16!119;CL:0002031!8.27e-16!124;CL:0002371!2.25e-11!591;CL:0000048!3.74e-09!430;CL:0000723!7.29e-09!436;CL:0002320!2.29e-08!365;CL:0000134!6.17e-08!358;CL:0000034!1.08e-07!444;CL:0000144!1.21e-07!625;CL:0002139!1.22e-07!24;CL:0000063!2.39e-07!578;CL:0000012!3.91e-07!682;CL:0000548!3.99e-07!679;CL:0000004!3.99e-07!679;CL:0000255!3.99e-07!679;CL:0000003!4.74e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.27e-21;33!CL:0002057;9.27e-21;33!CL:0000473;2.56e-16;39!CL:0000234;2.56e-16;39!CL:0000576;8.42e-16;48!CL:0000766;1.34e-12;69!CL:0002139;1.18e-07;24!CL:0002087;6.05e-07;104 | |ontology_enrichment_celltype_v019=CL:0000860;9.27e-21;33!CL:0002057;9.27e-21;33!CL:0000473;2.56e-16;39!CL:0000234;2.56e-16;39!CL:0000576;8.42e-16;48!CL:0000766;1.34e-12;69!CL:0002139;1.18e-07;24!CL:0002087;6.05e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.44e-27,42;CL:0002057,1.44e-27,42;CL:0000473,5.71e-26,48;CL:0000234,5.71e-26,48;CL:0000766,2.22e-22,72;CL:0000557,2.21e-20,67;CL:0000738,3.10e-20,136;CL:0002009,3.78e-19,61;CL:0002194,1.30e-18,59;CL:0000576,1.30e-18,59;CL:0000040,1.30e-18,59;CL:0000559,1.30e-18,59;CL:0000839,1.87e-18,66;CL:0002087,3.13e-16,115;CL:0002031,3.75e-16,120;CL:0000048,3.04e-09,427;CL:0000723,5.50e-09,433;CL:0002320,2.35e-08,361;CL:0000134,6.30e-08,354;CL:0000034,9.10e-08,441;CL:0002139,1.21e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002057;4.23e-20;42 | |ontology_enrichment_development_v019=CL:0002057;4.23e-20;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.02e-23!112;UBERON:0003081!1.06e-21!216;UBERON:0002390!6.58e-21!102;UBERON:0003061!6.58e-21!102;UBERON:0002371!1.89e-19!80;UBERON:0004765!1.06e-17!101;UBERON:0001434!1.06e-17!101;UBERON:0001474!4.12e-17!86;UBERON:0000926!8.77e-17!448;UBERON:0004120!8.77e-17!448;UBERON:0006603!8.77e-17!448;UBERON:0002204!1.16e-16!167;UBERON:0002405!3.06e-13!115;UBERON:0004535!2.66e-08!110;UBERON:0001009!4.88e-08!113;UBERON:0000055!8.12e-08!69;UBERON:0002384!1.43e-07!375 | |ontology_enrichment_uberon=UBERON:0002193!2.02e-23!112;UBERON:0003081!1.06e-21!216;UBERON:0002390!6.58e-21!102;UBERON:0003061!6.58e-21!102;UBERON:0002371!1.89e-19!80;UBERON:0004765!1.06e-17!101;UBERON:0001434!1.06e-17!101;UBERON:0001474!4.12e-17!86;UBERON:0000926!8.77e-17!448;UBERON:0004120!8.77e-17!448;UBERON:0006603!8.77e-17!448;UBERON:0002204!1.16e-16!167;UBERON:0002405!3.06e-13!115;UBERON:0004535!2.66e-08!110;UBERON:0001009!4.88e-08!113;UBERON:0000055!8.12e-08!69;UBERON:0002384!1.43e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.06e-24,108;UBERON:0002390,2.00e-21,98;UBERON:0003061,2.00e-21,98;UBERON:0003081,3.39e-21,203;UBERON:0002405,3.16e-20,93;UBERON:0002371,4.19e-20,76;UBERON:0001434,9.53e-19,100;UBERON:0004765,2.82e-18,90;UBERON:0002204,7.97e-18,167;UBERON:0001474,1.26e-17,82;UBERON:0000926,6.04e-17,315;UBERON:0004120,6.04e-17,315;UBERON:0006603,6.04e-17,315;UBERON:0004535,1.60e-08,109;UBERON:0001009,3.00e-08,112;UBERON:0000055,4.24e-08,68;UBERON:0002384,1.45e-07,371 | |||
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| ||
|short_description=p4@CAST | |short_description=p4@CAST | ||
}} | }} |
Latest revision as of 08:59, 19 September 2015
Short description: | p4@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CAST_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | -47bp_to_ENST00000507487, ENST00000515160_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.44e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.44e-27 | 42 |
defensive cell | 5.71e-26 | 48 |
phagocyte | 5.71e-26 | 48 |
myeloid leukocyte | 2.22e-22 | 72 |
granulocyte monocyte progenitor cell | 2.21e-20 | 67 |
leukocyte | 3.10e-20 | 136 |
macrophage dendritic cell progenitor | 3.78e-19 | 61 |
monopoietic cell | 1.30e-18 | 59 |
monocyte | 1.30e-18 | 59 |
monoblast | 1.30e-18 | 59 |
promonocyte | 1.30e-18 | 59 |
myeloid lineage restricted progenitor cell | 1.87e-18 | 66 |
nongranular leukocyte | 3.13e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 3.75e-16 | 120 |
multi fate stem cell | 3.04e-09 | 427 |
somatic stem cell | 5.50e-09 | 433 |
connective tissue cell | 2.35e-08 | 361 |
mesenchymal cell | 6.30e-08 | 354 |
stem cell | 9.10e-08 | 441 |
endothelial cell of vascular tree | 1.21e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.06e-24 | 108 |
hematopoietic system | 2.00e-21 | 98 |
blood island | 2.00e-21 | 98 |
lateral plate mesoderm | 3.39e-21 | 203 |
immune system | 3.16e-20 | 93 |
bone marrow | 4.19e-20 | 76 |
skeletal system | 9.53e-19 | 100 |
skeletal element | 2.82e-18 | 90 |
musculoskeletal system | 7.97e-18 | 167 |
bone element | 1.26e-17 | 82 |
mesoderm | 6.04e-17 | 315 |
mesoderm-derived structure | 6.04e-17 | 315 |
presumptive mesoderm | 6.04e-17 | 315 |
cardiovascular system | 1.60e-08 | 109 |
circulatory system | 3.00e-08 | 112 |
vessel | 4.24e-08 | 68 |
connective tissue | 1.45e-07 | 371 |