FFCP PHASE1:Hg19::chr11:65265141..65265306,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=378938 | |EntrezGene=378938 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=29665 | |HGNC=29665 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000534336,NR_002819,uc010roh.1_5end | |association_with_transcript=0bp_to_ENST00000534336,NR_002819,uc010roh.1_5end | ||
|cluster_id=chr11:65265141..65265306,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_4_at_MALAT1_5end | |description=CAGE_peak_4_at_MALAT1_5end | ||
|id=chr11:65265141..65265306,+ | |id=chr11:65265141..65265306,+ | ||
|ontology_enrichment_celltype=CL:0000738!5.99e-35!140;CL:0000037!4.76e-31!172;CL:0000566!4.76e-31!172;CL:0000988!1.12e-28!182;CL:0002032!6.90e-28!165;CL:0000837!6.90e-28!165;CL:0002031!7.90e-28!124;CL:0002087!6.68e-25!119;CL:0002057!5.89e-22!42;CL:0000766!1.59e-20!76;CL:0000860!1.90e-19!45;CL:0000763!2.69e-17!112;CL:0000049!2.69e-17!112;CL:0000557!3.66e-17!71;CL:0000839!1.17e-16!70;CL:0002009!8.03e-15!65;CL:0002194!6.08e-14!63;CL:0000576!6.08e-14!63;CL:0000040!6.08e-14!63;CL:0000559!6.08e-14!63;CL:0000838!2.56e-10!52;CL:0000542!4.50e-10!53;CL:0000051!4.50e-10!53;CL:0000791!2.53e-07!18;CL:0000789!2.53e-07!18;CL:0002420!2.53e-07!18;CL:0002419!2.53e-07!18;CL:0000790!2.53e-07!18 | |ontology_enrichment_celltype=CL:0000738!5.99e-35!140;CL:0000037!4.76e-31!172;CL:0000566!4.76e-31!172;CL:0000988!1.12e-28!182;CL:0002032!6.90e-28!165;CL:0000837!6.90e-28!165;CL:0002031!7.90e-28!124;CL:0002087!6.68e-25!119;CL:0002057!5.89e-22!42;CL:0000766!1.59e-20!76;CL:0000860!1.90e-19!45;CL:0000763!2.69e-17!112;CL:0000049!2.69e-17!112;CL:0000557!3.66e-17!71;CL:0000839!1.17e-16!70;CL:0002009!8.03e-15!65;CL:0002194!6.08e-14!63;CL:0000576!6.08e-14!63;CL:0000040!6.08e-14!63;CL:0000559!6.08e-14!63;CL:0000838!2.56e-10!52;CL:0000542!4.50e-10!53;CL:0000051!4.50e-10!53;CL:0000791!2.53e-07!18;CL:0000789!2.53e-07!18;CL:0002420!2.53e-07!18;CL:0002419!2.53e-07!18;CL:0000790!2.53e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.43e-17;33!CL:0002057;8.43e-17;33!CL:0000576;1.07e-12;48!CL:0000473;3.90e-11;39!CL:0000234;3.90e-11;39!CL:0000766;1.20e-10;69!CL:0002087;1.29e-09;104!CL:0000738;4.49e-08;136!CL:0000791;2.48e-07;18!CL:0000789;2.48e-07;18!CL:0002419;2.48e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.44e-37,136;CL:0000037,1.17e-32,168;CL:0000988,1.13e-30,177;CL:0002031,9.99e-30,120;CL:0002032,1.99e-29,161;CL:0000837,1.99e-29,161;CL:0002087,1.05e-26,115;CL:0000766,1.00e-22,72;CL:0000860,5.88e-22,42;CL:0002057,5.88e-22,42;CL:0000557,3.49e-19,67;CL:0000763,9.61e-19,108;CL:0000049,9.61e-19,108;CL:0000839,1.18e-18,66;CL:0000473,4.73e-18,48;CL:0000234,4.73e-18,48;CL:0002009,9.38e-17,61;CL:0002194,7.88e-16,59;CL:0000576,7.88e-16,59;CL:0000040,7.88e-16,59;CL:0000559,7.88e-16,59;CL:0000838,2.55e-10,52;CL:0000542,4.50e-10,53;CL:0000051,4.50e-10,53;CL:0000791,2.53e-07,18;CL:0000789,2.53e-07,18;CL:0002420,2.53e-07,18;CL:0002419,2.53e-07,18;CL:0000790,2.53e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;3.84e-16;42!CL:0000790;2.48e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.89e-21!102;UBERON:0003061!5.89e-21!102;UBERON:0002193!1.85e-17!112;UBERON:0007023!2.48e-17!115;UBERON:0002371!1.51e-14!80;UBERON:0001474!1.60e-12!86;UBERON:0002405!1.96e-10!115;UBERON:0001049!6.60e-08!57;UBERON:0005068!6.60e-08!57;UBERON:0006241!6.60e-08!57;UBERON:0007135!6.60e-08!57;UBERON:0004765!2.21e-07!101;UBERON:0001434!2.21e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!5.89e-21!102;UBERON:0003061!5.89e-21!102;UBERON:0002193!1.85e-17!112;UBERON:0007023!2.48e-17!115;UBERON:0002371!1.51e-14!80;UBERON:0001474!1.60e-12!86;UBERON:0002405!1.96e-10!115;UBERON:0001049!6.60e-08!57;UBERON:0005068!6.60e-08!57;UBERON:0006241!6.60e-08!57;UBERON:0007135!6.60e-08!57;UBERON:0004765!2.21e-07!101;UBERON:0001434!2.21e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.67e-23,98;UBERON:0003061,9.67e-23,98;UBERON:0002193,6.44e-19,108;UBERON:0007023,3.30e-17,114;UBERON:0002371,3.56e-16,76;UBERON:0002405,6.24e-14,93;UBERON:0001474,6.69e-14,82;UBERON:0004765,3.47e-10,90;UBERON:0001049,8.70e-08,56;UBERON:0005068,8.70e-08,56;UBERON:0006241,8.70e-08,56;UBERON:0007135,8.70e-08,56;UBERON:0001434,2.52e-07,100;UBERON:0000073,5.31e-07,53;UBERON:0002616,5.31e-07,53 | |||
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| ||
|short_description=p4@MALAT1 | |short_description=p4@MALAT1 | ||
}} | }} |
Latest revision as of 08:58, 19 September 2015
Short description: | p4@MALAT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MALAT1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000534336, NR_002819, uc010roh.1_5end |
EntrezGene: | MALAT1 |
HGNC: | 29665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.67e-23 | 98 |
blood island | 9.67e-23 | 98 |
hemolymphoid system | 6.44e-19 | 108 |
adult organism | 3.30e-17 | 114 |
bone marrow | 3.56e-16 | 76 |
immune system | 6.24e-14 | 93 |
bone element | 6.69e-14 | 82 |
skeletal element | 3.47e-10 | 90 |
neural tube | 8.70e-08 | 56 |
neural rod | 8.70e-08 | 56 |
future spinal cord | 8.70e-08 | 56 |
neural keel | 8.70e-08 | 56 |
skeletal system | 2.52e-07 | 100 |
regional part of nervous system | 5.31e-07 | 53 |
regional part of brain | 5.31e-07 | 53 |