FFCP PHASE1:Hg19::chr3:63897742..63897797,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6314 | |EntrezGene=6314 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10560 | |HGNC=10560 | ||
|TSSclassifier=strong | |||
|UniProt=O15265 | |UniProt=O15265 | ||
|association_with_transcript=137bp_to_ENST00000487717_5end | |association_with_transcript=137bp_to_ENST00000487717_5end | ||
|cluster_id=chr3:63897742..63897797,+ | |||
|description=CAGE_peak_2_at_ATXN7_5end | |description=CAGE_peak_2_at_ATXN7_5end | ||
|id=chr3:63897742..63897797,+ | |id=chr3:63897742..63897797,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.50e-22!42;CL:0000766!2.33e-21!76;CL:0000738!2.11e-20!140;CL:0000860!4.24e-20!45;CL:0000557!7.84e-19!71;CL:0000839!6.19e-18!70;CL:0002009!5.36e-16!65;CL:0002031!6.99e-15!124;CL:0002194!7.30e-15!63;CL:0000576!7.30e-15!63;CL:0000040!7.30e-15!63;CL:0000559!7.30e-15!63;CL:0000037!2.00e-12!172;CL:0000566!2.00e-12!172;CL:0002087!3.45e-12!119;CL:0000763!9.77e-12!112;CL:0000049!9.77e-12!112;CL:0002032!2.16e-10!165;CL:0000837!2.16e-10!165;CL:0000988!2.59e-10!182;CL:0000134!3.80e-07!358 | |ontology_enrichment_celltype=CL:0002057!7.50e-22!42;CL:0000766!2.33e-21!76;CL:0000738!2.11e-20!140;CL:0000860!4.24e-20!45;CL:0000557!7.84e-19!71;CL:0000839!6.19e-18!70;CL:0002009!5.36e-16!65;CL:0002031!6.99e-15!124;CL:0002194!7.30e-15!63;CL:0000576!7.30e-15!63;CL:0000040!7.30e-15!63;CL:0000559!7.30e-15!63;CL:0000037!2.00e-12!172;CL:0000566!2.00e-12!172;CL:0002087!3.45e-12!119;CL:0000763!9.77e-12!112;CL:0000049!9.77e-12!112;CL:0002032!2.16e-10!165;CL:0000837!2.16e-10!165;CL:0000988!2.59e-10!182;CL:0000134!3.80e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.51e-16;33!CL:0002057;1.51e-16;33!CL:0000576;1.01e-12;48!CL:0000766;2.11e-10;69!CL:0000473;2.45e-10;39!CL:0000234;2.45e-10;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.07e-22,72;CL:0000860,6.15e-22,42;CL:0002057,6.15e-22,42;CL:0000738,3.06e-21,136;CL:0000557,4.28e-20,67;CL:0000839,3.73e-19,66;CL:0002009,3.63e-17,61;CL:0000473,3.88e-17,48;CL:0000234,3.88e-17,48;CL:0002194,5.54e-16,59;CL:0000576,5.54e-16,59;CL:0000040,5.54e-16,59;CL:0000559,5.54e-16,59;CL:0002031,1.31e-15,120;CL:0000037,6.57e-13,168;CL:0002087,8.53e-13,115;CL:0000763,2.72e-12,108;CL:0000049,2.72e-12,108;CL:0000988,3.84e-11,177;CL:0002032,8.04e-11,161;CL:0000837,8.04e-11,161;CL:0000134,1.28e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;2.66e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.81e-22!102;UBERON:0003061!7.81e-22!102;UBERON:0002193!1.47e-19!112;UBERON:0002371!7.33e-18!80;UBERON:0001474!1.53e-16!86;UBERON:0004765!5.75e-14!101;UBERON:0001434!5.75e-14!101;UBERON:0002405!1.47e-12!115;UBERON:0002204!2.36e-07!167;UBERON:0003081!2.89e-07!216 | |ontology_enrichment_uberon=UBERON:0002390!7.81e-22!102;UBERON:0003061!7.81e-22!102;UBERON:0002193!1.47e-19!112;UBERON:0002371!7.33e-18!80;UBERON:0001474!1.53e-16!86;UBERON:0004765!5.75e-14!101;UBERON:0001434!5.75e-14!101;UBERON:0002405!1.47e-12!115;UBERON:0002204!2.36e-07!167;UBERON:0003081!2.89e-07!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.14e-23,98;UBERON:0003061,7.14e-23,98;UBERON:0002193,2.10e-20,108;UBERON:0002371,6.20e-19,76;UBERON:0001474,1.76e-17,82;UBERON:0002405,1.01e-15,93;UBERON:0004765,3.48e-14,90;UBERON:0001434,2.08e-13,100;UBERON:0003081,2.31e-09,203;UBERON:0002204,6.52e-07,167 | |||
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| ||
|short_description=p2@ATXN7 | |short_description=p2@ATXN7 | ||
}} | }} |
Latest revision as of 08:55, 19 September 2015
Short description: | p2@ATXN7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ATXN7_5end |
Coexpression cluster: | NA |
Association with transcript: | 137bp_to_ENST00000487717_5end |
EntrezGene: | ATXN7 |
HGNC: | 10560 |
UniProt: | O15265 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.07e-22 | 72 |
classical monocyte | 6.15e-22 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.15e-22 | 42 |
leukocyte | 3.06e-21 | 136 |
granulocyte monocyte progenitor cell | 4.28e-20 | 67 |
myeloid lineage restricted progenitor cell | 3.73e-19 | 66 |
macrophage dendritic cell progenitor | 3.63e-17 | 61 |
defensive cell | 3.88e-17 | 48 |
phagocyte | 3.88e-17 | 48 |
monopoietic cell | 5.54e-16 | 59 |
monocyte | 5.54e-16 | 59 |
monoblast | 5.54e-16 | 59 |
promonocyte | 5.54e-16 | 59 |
hematopoietic lineage restricted progenitor cell | 1.31e-15 | 120 |
hematopoietic stem cell | 6.57e-13 | 168 |
nongranular leukocyte | 8.53e-13 | 115 |
myeloid cell | 2.72e-12 | 108 |
common myeloid progenitor | 2.72e-12 | 108 |
hematopoietic cell | 3.84e-11 | 177 |
hematopoietic oligopotent progenitor cell | 8.04e-11 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-11 | 161 |
mesenchymal cell | 1.28e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.14e-23 | 98 |
blood island | 7.14e-23 | 98 |
hemolymphoid system | 2.10e-20 | 108 |
bone marrow | 6.20e-19 | 76 |
bone element | 1.76e-17 | 82 |
immune system | 1.01e-15 | 93 |
skeletal element | 3.48e-14 | 90 |
skeletal system | 2.08e-13 | 100 |
lateral plate mesoderm | 2.31e-09 | 203 |
musculoskeletal system | 6.52e-07 | 167 |