FFCP PHASE1:Hg19::chr5:95997750..95997768,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |EntrezGene=831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |HGNC=1515 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000338252,uc003klt.2_5end | |association_with_transcript=-8bp_to_ENST00000338252,uc003klt.2_5end | ||
|cluster_id=chr5:95997750..95997768,+ | |||
|description=CAGE_peak_9_at_CAST_5end | |description=CAGE_peak_9_at_CAST_5end | ||
|id=chr5:95997750..95997768,+ | |id=chr5:95997750..95997768,+ | ||
|ontology_enrichment_celltype=CL:0000791!1.62e-08!18;CL:0000789!1.62e-08!18;CL:0002420!1.62e-08!18;CL:0002419!1.62e-08!18;CL:0000790!1.62e-08!18;CL:0000625!6.39e-07!11 | |ontology_enrichment_celltype=CL:0000791!1.62e-08!18;CL:0000789!1.62e-08!18;CL:0002420!1.62e-08!18;CL:0002419!1.62e-08!18;CL:0000790!1.62e-08!18;CL:0000625!6.39e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;9.04e-09;18!CL:0000789;9.04e-09;18!CL:0002419;9.04e-09;18!CL:0000625;3.24e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.38e-08,18;CL:0000789,1.38e-08,18;CL:0002420,1.38e-08,18;CL:0002419,1.38e-08,18;CL:0000790,1.38e-08,18;CL:0000625,5.64e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;9.04e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@CAST | |short_description=p9@CAST | ||
}} | }} |
Latest revision as of 08:53, 19 September 2015
Short description: | p9@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CAST_5end |
Coexpression cluster: | NA |
Association with transcript: | -8bp_to_ENST00000338252, uc003klt.2_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.38e-08 | 18 |
alpha-beta T cell | 1.38e-08 | 18 |
immature T cell | 1.38e-08 | 18 |
mature T cell | 1.38e-08 | 18 |
immature alpha-beta T cell | 1.38e-08 | 18 |
CD8-positive, alpha-beta T cell | 5.64e-07 | 11 |