FFCP PHASE1:Hg19::chr3:10359730..10359734,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:10359730..10359734,- to FFCP PHASE1:Hg19::chr3:10359730..10359734,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6396 | |EntrezGene=6396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10697 | |HGNC=10697 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=29bp_to_ENST00000477547_5end | |||
|cluster_id=chr3:10359730..10359734,- | |||
|coexpression_cluster_id=C193 | |||
|description=CAGE_peak_4_at_SEC13_5end | |||
|id=chr3:10359730..10359734,- | |||
|ontology_enrichment_celltype=CL:0000055!1.57e-17!180;CL:0000548!1.38e-12!679;CL:0000004!1.38e-12!679;CL:0000255!1.38e-12!679;CL:0000012!2.79e-12!682;CL:0000057!3.55e-12!75;CL:0000680!3.71e-12!57;CL:0000056!3.71e-12!57;CL:0000355!3.71e-12!57;CL:0002371!3.89e-12!591;CL:0000183!6.75e-12!59;CL:0000144!7.35e-12!625;CL:0000187!1.20e-11!54;CL:0000393!1.77e-09!60;CL:0000211!1.77e-09!60;CL:0000003!2.37e-09!722;CL:0000192!5.01e-09!42;CL:0000514!5.01e-09!42;CL:0000222!9.84e-09!119 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.54e-09;1!CL:0002625;2.54e-09;1!CL:0002252;2.54e-09;1!CL:0000216;2.54e-09;1!CL:0002601;2.54e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.21e-09,1;CL:0002625,1.21e-09,1;CL:0000216,1.21e-09,1;CL:0002252,2.16e-09,1;CL:0002601,4.50e-09,1;CL:0000192,2.81e-08,43;CL:0000514,2.81e-08,43;CL:0000222,1.88e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.03e-15!143;UBERON:0000914!4.01e-14!83;UBERON:0002329!4.01e-14!83;UBERON:0003077!4.01e-14!83;UBERON:0003059!4.01e-14!83;UBERON:0007282!4.01e-14!83;UBERON:0009618!4.01e-14!83;UBERON:0007285!4.01e-14!83;UBERON:0000490!2.21e-12!138;UBERON:0004290!8.63e-12!70;UBERON:0001134!1.18e-10!61;UBERON:0002036!1.18e-10!61;UBERON:0003082!1.18e-10!61;UBERON:0002385!5.51e-10!63;UBERON:0001015!5.51e-10!63;UBERON:0000383!5.51e-10!63;UBERON:0002100!1.14e-09!216;UBERON:0003104!1.23e-09!238;UBERON:0009142!1.23e-09!238;UBERON:0000486!4.69e-09!82;UBERON:0002049!1.39e-08!79;UBERON:0007798!1.39e-08!79;UBERON:0000475!2.78e-08!365;UBERON:0000481!8.01e-08!347;UBERON:0000119!1.14e-07!312;UBERON:0004535!2.56e-07!110;UBERON:0001009!8.23e-07!113;UBERON:0000483!8.54e-07!309;UBERON:0003914!9.24e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.54e-09;1!UBERON:0001343;2.54e-09;1!UBERON:0004910;2.54e-09;1!UBERON:0004813;2.54e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.21e-09,1;UBERON:0001343,1.21e-09,1;UBERON:0004910,1.21e-09,1;UBERON:0005154,1.21e-09,1;UBERON:0005295,1.21e-09,1;UBERON:0004813,1.21e-09,1;UBERON:0005297,1.21e-09,1;UBERON:0005294,1.21e-09,1;UBERON:0010141,1.21e-09,1;UBERON:0005891,1.21e-09,1;UBERON:0002049,4.97e-07,78;UBERON:0007798,4.97e-07,78 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0.495065411840187,0.662794751455832,0,0.602694528023977,0,0,1.10808952269109,0,0.313454721478088,0,0,0,0,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0.30120591877825,0,0.309868802321207,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.767175371061182,1.80719576192283,0,0,0,0.973269740605272,0.567208902984407,0,0.087834785693126,0.130979075497713,0,0,0,0,0.132957960518865,0,0,0,0.993812036833525,0,1.04142150482278,0,0,0,0.417989933073621,0.258416759169329,0,0,0.805658634218294,0,0,0,0,0.17859945656816,0,0,0,4.74632829784064,0.366403487860815,0,0,1.3082821564276,0,0.25326102332916,0.132409180813219,0,0.354668382198357,0,0,0,0.311211035399766,0.134710672069688,0,0.605429710579726,0,0.468642863667593,0.312160076830321,0.570471821544449,0,0,0.161872944368132,0.140450806702248,0.61246251376468,0.245668634623536,0.309977343527296,1.18800285728205,0.494533858557114,2.73048408581408,0.718618141816238,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0.453728732640084,0.358779271377724,0.640672166455702,0.847727604638247,0,1.03052529238439,0,0,0,0.487185025805993,0.252433774244115,0.736399189138395,0.484938170456436,0,0.503760491138201,0.508681776931463,0,0,0,0,0.132529768321485,0,0,0,0,0,0.643240938192885,0,0,0,0.118306800039844,0,0.241011029883482,0,0.217879444092406,0,0,0,0,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0,0.857839051492628,0.109750285408626,0,0,0.0925884451585296,0,0,1.44331342025273,0.34779121492523,0.234817388471643,0,0.925971025153221,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,1.00917975910825,0.43596006883328,0.2933531432838,0.129271715757778,14.3062578340753,0,0,0,0.257207374262142,0,0,0.285955987316295,1.08524321078289,0,0.65147236858747,0.355391948742546,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.10422342547226,0,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0.347534457872331,1.37060810223918,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0.154209693802656,0.355123450626254,0.492762936082855,0.519254429183621,0.116210378459959,0,0,0,0.574072240823034,0,0.393373244878272,0,0.15403067420883,0.784349769176855,0,0.316654886678627,0,0,0,1.54227252690289,0.812839312631559,0,0,0,0.223874754722178,0,0,0.769350375349168,0,0,0,0,0,0,0,1.6068392984416,0.48335359146061,0.308097234229289,0.15350367472613,0,0.214840489736547,0.145016693914229,0.170453254832202,0.890320356467374,0.165284915360978,0,0,0,0,0,1.3940745403212,0.308033580176089,1.06461206063404,0,0.18532421910392,0.143124886741991,1.116475108079,0.316379424718726,0,0.255897791311334,0.42793898803392,4.77304871888905,0.78494864019923,1.07923474549989,0.54907405947211,0.353437207037059,0.606547444719948,0,0,0.48763373908959,0,0,0.682499557039929,0.282810863907425,0,0,0,0,0,0,0.811641507850816,0.30982349809975,0,0.430234056612155,0.491245205065606,1.07001315444375,1.06428319221179,0,0,1.51789269506286,0.349934720244983,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0.447352215784832,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0,0.179736702294654,0.358042349351218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0.23056390438806,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0.889563386041866,0.123563938946503,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0,0,0,0,0.0969890164884194,0.353024506766001,0,0,0,0,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0.203996435272644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0.247247575143499,0,0,0.254019996197353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144921028610825,0.447764408660622,0,0.554805861502613,0,0,0.889811221596536,0,0,0.466311601748341,0.147855149989634,0.159296767163702,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0.398095888698616,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0.198916222116275,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0.342976018874837,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.392600934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| ||
|short_description=p4@SEC13 | |||
}} | }} |
Latest revision as of 08:49, 19 September 2015
Short description: | p4@SEC13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEC13_5end |
Coexpression cluster: | C193_Mesenchymal_Adipocyte_mature_Cardiac_heart_CD14CD16_CD14 |
Association with transcript: | 29bp_to_ENST00000477547_5end |
EntrezGene: | SEC13 |
HGNC: | 10697 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.21e-09 | 1 |
seminiferous tubule epithelial cell | 1.21e-09 | 1 |
Sertoli cell | 1.21e-09 | 1 |
epithelial cell of esophagus | 2.16e-09 | 1 |
uterine smooth muscle cell | 4.50e-09 | 1 |
smooth muscle cell | 2.81e-08 | 43 |
smooth muscle myoblast | 2.81e-08 | 43 |
mesodermal cell | 1.88e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.21e-09 | 1 |
seminiferous tubule of testis | 1.21e-09 | 1 |
epithelium of male gonad | 1.21e-09 | 1 |
epithelial cord | 1.21e-09 | 1 |
sex cord | 1.21e-09 | 1 |
seminiferous tubule epithelium | 1.21e-09 | 1 |
testis sex cord | 1.21e-09 | 1 |
genital ridge | 1.21e-09 | 1 |
primitive sex cord of indifferent gonad | 1.21e-09 | 1 |
coelomic epithelium | 1.21e-09 | 1 |
vasculature | 4.97e-07 | 78 |
vascular system | 4.97e-07 | 78 |