FFCP PHASE1:Hg19::chr6:56112323..56112385,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81578 | |EntrezGene=81578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17025 | |HGNC=17025 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZK2,Q96P44 | |UniProt=F5GZK2,Q96P44 | ||
|association_with_transcript=0bp_to_ENST00000370811,ENST00000535941,NM_030820,uc003pcs.2,uc003pct.1,uc011dxi.1_5end | |association_with_transcript=0bp_to_ENST00000370811,ENST00000535941,NM_030820,uc003pcs.2,uc003pct.1,uc011dxi.1_5end | ||
|cluster_id=chr6:56112323..56112385,- | |||
|coexpression_cluster_id=C4618 | |coexpression_cluster_id=C4618 | ||
|description=CAGE_peak_1_at_COL21A1_5end | |description=CAGE_peak_1_at_COL21A1_5end | ||
|id=chr6:56112323..56112385,- | |id=chr6:56112323..56112385,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.75e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002780;1.06e-16;41!UBERON:0001890;1.06e-16;41!UBERON:0000073;2.86e-16;53!UBERON:0002616;2.86e-16;53!UBERON:0001893;1.98e-15;34!UBERON:0003528;2.03e-15;34!UBERON:0002020;2.03e-15;34!UBERON:0002791;2.20e-15;32!UBERON:0001869;3.05e-15;32!UBERON:0002619;1.35e-14;22!UBERON:0001950;5.15e-13;20!UBERON:0000956;5.18e-13;25!UBERON:0000203;5.18e-13;25!UBERON:0001017;2.08e-12;75!UBERON:0000955;8.85e-12;68!UBERON:0007023;5.56e-11;114!UBERON:0001016;3.72e-10;83!UBERON:0011216;2.33e-08;132!UBERON:0000922;1.24e-07;49!UBERON:0004733;1.80e-07;12!UBERON:0002028;1.80e-07;12!UBERON:0004905;3.50e-07;8!UBERON:0000982;3.50e-07;8!UBERON:0004770;3.50e-07;8!UBERON:0002420;5.53e-07;9!UBERON:0007245;5.53e-07;9!UBERON:0010009;5.53e-07;9!UBERON:0010011;5.53e-07;9!UBERON:0000454;5.53e-07;9 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-36!115;UBERON:0002616!1.92e-28!59;UBERON:0001049!3.95e-27!57;UBERON:0005068!3.95e-27!57;UBERON:0006241!3.95e-27!57;UBERON:0007135!3.95e-27!57;UBERON:0002346!3.57e-25!90;UBERON:0003075!1.93e-24!86;UBERON:0007284!1.93e-24!86;UBERON:0001017!4.90e-24!82;UBERON:0005743!2.38e-23!86;UBERON:0000955!9.11e-23!69;UBERON:0006238!9.11e-23!69;UBERON:0000073!1.77e-22!94;UBERON:0001016!1.77e-22!94;UBERON:0000153!1.89e-21!129;UBERON:0007811!1.89e-21!129;UBERON:0000033!7.16e-21!123;UBERON:0003080!3.88e-20!42;UBERON:0002780!1.40e-19!41;UBERON:0001890!1.40e-19!41;UBERON:0006240!1.40e-19!41;UBERON:0000924!1.30e-18!173;UBERON:0006601!1.30e-18!173;UBERON:0004121!7.70e-18!169;UBERON:0003056!1.42e-17!61;UBERON:0000475!1.32e-16!365;UBERON:0001893!4.40e-16!34;UBERON:0000481!6.67e-16!347;UBERON:0002020!7.23e-16!34;UBERON:0003528!7.23e-16!34;UBERON:0002791!1.13e-15!33;UBERON:0001869!5.54e-15!32;UBERON:0000468!2.10e-12!659;UBERON:0000956!5.72e-12!25;UBERON:0000203!5.72e-12!25;UBERON:0002619!7.76e-12!22;UBERON:0000119!1.09e-11!312;UBERON:0000483!2.73e-11!309;UBERON:0000477!3.55e-11!286;UBERON:0001950!1.39e-10!20;UBERON:0000922!2.48e-10!612;UBERON:0000062!3.18e-09!511;UBERON:0002050!3.28e-09!605;UBERON:0005423!3.28e-09!605;UBERON:0000923!7.58e-09!604;UBERON:0005291!7.58e-09!604;UBERON:0006598!7.58e-09!604;UBERON:0002532!7.58e-09!604;UBERON:0004111!2.26e-08!241;UBERON:0003076!3.84e-08!15;UBERON:0003057!3.84e-08!15;UBERON:0000064!8.92e-08!219;UBERON:0000467!2.36e-07!625;UBERON:0000480!3.14e-07!626;UBERON:0000025!9.17e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.06e-16;41!UBERON:0001890;1.06e-16;41!UBERON:0000073;2.86e-16;53!UBERON:0002616;2.86e-16;53!UBERON:0001893;1.98e-15;34!UBERON:0003528;2.03e-15;34!UBERON:0002020;2.03e-15;34!UBERON:0002791;2.20e-15;32!UBERON:0001869;3.05e-15;32!UBERON:0002619;1.35e-14;22!UBERON:0001950;5.15e-13;20!UBERON:0000956;5.18e-13;25!UBERON:0000203;5.18e-13;25!UBERON:0001017;2.08e-12;75!UBERON:0000955;8.85e-12;68!UBERON:0007023;5.56e-11;114!UBERON:0001016;3.72e-10;83!UBERON:0011216;2.33e-08;132!UBERON:0000922;1.24e-07;49!UBERON:0004733;1.80e-07;12!UBERON:0002028;1.80e-07;12!UBERON:0004905;3.50e-07;8!UBERON:0000982;3.50e-07;8!UBERON:0004770;3.50e-07;8!UBERON:0002420;5.53e-07;9!UBERON:0007245;5.53e-07;9!UBERON:0010009;5.53e-07;9!UBERON:0010011;5.53e-07;9!UBERON:0000454;5.53e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.25e-41,114;UBERON:0001049,4.97e-31,56;UBERON:0005068,4.97e-31,56;UBERON:0006241,4.97e-31,56;UBERON:0007135,4.97e-31,56;UBERON:0002346,8.99e-29,86;UBERON:0000073,1.50e-28,53;UBERON:0002616,1.50e-28,53;UBERON:0003075,1.08e-27,82;UBERON:0007284,1.08e-27,82;UBERON:0000955,2.71e-27,68;UBERON:0006238,2.71e-27,68;UBERON:0001017,1.15e-26,81;UBERON:0001016,1.63e-24,89;UBERON:0010314,4.83e-23,132;UBERON:0002780,2.68e-22,41;UBERON:0001890,2.68e-22,41;UBERON:0003080,2.68e-22,41;UBERON:0006240,2.68e-22,41;UBERON:0004121,5.99e-21,171;UBERON:0000924,5.99e-21,171;UBERON:0006601,5.99e-21,171;UBERON:0010371,9.31e-21,104;UBERON:0011216,2.00e-20,223;UBERON:0003056,3.87e-18,61;UBERON:0001893,6.02e-18,34;UBERON:0003528,1.09e-17,34;UBERON:0002020,1.09e-17,34;UBERON:0002791,1.03e-16,32;UBERON:0001869,1.38e-16,32;UBERON:0002619,1.82e-14,22;UBERON:0001950,6.86e-13,20;UBERON:0000956,7.82e-13,25;UBERON:0000203,7.82e-13,25;UBERON:0000483,5.87e-10,306;UBERON:0000119,6.51e-10,309;UBERON:0003076,7.89e-10,15;UBERON:0003057,7.89e-10,15;UBERON:0002050,8.10e-10,564;UBERON:0000923,9.86e-10,560;UBERON:0010316,9.86e-10,560;UBERON:0005291,9.86e-10,560;UBERON:0006598,9.86e-10,560;UBERON:0010317,9.86e-10,560;UBERON:0002532,9.86e-10,560;UBERON:0000922,6.64e-09,592;UBERON:0005423,8.20e-09,581;UBERON:0004111,3.08e-08,240;UBERON:0000479,1.00e-07,773;UBERON:0004733,1.82e-07,12;UBERON:0002028,1.82e-07,12;UBERON:0007277,1.82e-07,12;UBERON:0004905,3.12e-07,8;UBERON:0000982,3.12e-07,8;UBERON:0004770,3.12e-07,8;UBERON:0002420,5.44e-07,9;UBERON:0007245,5.44e-07,9;UBERON:0010009,5.44e-07,9;UBERON:0010011,5.44e-07,9;UBERON:0000454,5.44e-07,9;UBERON:0000025,6.66e-07,192 | |||
|phase1_expression=0.726713517082227,1.92690471501885,0.986680828671798,2.00146596706261,1.34088328328186,0.872338524100369,0,3.15859936713415,2.35067065379855,0,0,0,0.263766978228454,20.7927472972878,22.5350215494983,0,0,0,0,3.20114750999649,1.42800483870977,3.13454721478088,0.85870796139317,0.547497700291537,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.6375105890716,0,3.06870148424473,0.722878304769133,3.50936537445123,1.88300474649071,0,0,2.26883561193763,1.55210578223795,1.31752178539689,4.78073625566651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0.714397826272638,1.79623498100936,0.788280363383256,1.53316637465883,0,0,0,0,0,5.4666914686485,0.759783069987479,0,57.6541607705116,3.54668382198357,1.68203280042692,0,0.24666754841716,24.8968828319813,2.82892411346345,0.817309515567294,60.3916136303276,120.42076821632,2.81185718200556,0,0.570471821544449,1.94283284717341,2.3486899728753,0.971237666208789,0.140450806702248,3.67477508258808,0,24.1782327951291,1.18800285728205,1.23633464639278,0,0,1.0100166837244,1.87677779807946,0,0.877955241761676,0,2.40380894250555,0,0.358779271377724,2.77624605464138,0.423863802319124,0,0,2.06112432036503,1.67505170698431,0,0,0,0.0920498986422993,8.89053312503465,5.68015348026583,0.302256294682921,0.508681776931463,0,0,0,0.487894824518382,1.06023814657188,0.813357600086629,0.310983165046111,0,0.36497735907583,0,3.21620469096443,0,3.25057549622385,4.33127689001751,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0.8231480226628,0,0,0,2.95394953340702,0,0,0.343135620597051,0,0,0,0.0925884451585296,2.28065813717227,0,1.44331342025273,1.73895607462615,1.6437217193015,0,0,0,4.74122638775565,2.57545848628462,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0.432359860250884,0.6312121671319,0.317489471460845,0,0,0,0,0,0,0.448524337381443,2.1798003441664,0.4400297149257,0,14.3062578340753,1.690605505112,0.26593811658487,0,0,0,0.266422179016099,0.714889968290738,0,0,0.325736184293735,0,0,0,0,0,0,0,0,1.4377491329495,5.7430967917057,0,0.289562613335158,5.13690806375959,0.895304816199478,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,22.5752344763217,12.5042630264919,19.531081706381,0,1.60586089917446,0,1.7571212248907,18.0567659836631,9.09630016223939,4.1389228517002,1.32845119707087,2.58116835958384,4.86548241021264,2.34961388955289,6.86286847621712,0,0,0,0,3.32870879020994,0.30239029332968,0.496215615637554,0.920771839728375,0.280660094433074,0.128139149255701,0.511707249066704,0.321707842287215,0,0,0,0.657017248110473,0,0,0,0,0.828728900423067,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,3.709476419318,0,0,0,0,0,6.57360884386429,2.00263202249038,3.99109554287937,0.413509717453592,19.4430643211575,12.6164523705379,1.87498580315422,33.8321735457602,0.495854746082934,0,0,0.4046311234222,0,0.31481234683064,0,0,0,0,0,0,17.863601729264,10.1241415909992,2.85945290885737,0.511795582622668,18.8293154734925,0,0,5.03642881233281,1.92175920815238,3.06312246098785,0,0,0,0.48763373908959,0,0,2.04749867111979,1.1312434556297,1.13008116620243,0,0,0,0.578775534266688,30.8270533461917,0,0.30982349809975,0,0,0.392996164052485,0,1.41904425628239,2.32218398827431,4.28083360847872,0.75894634753143,5.24902080367474,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90460633053462,0,0,0,0,0,0,8.94732882989668,12.2382392277146,0.779160935160341,0,0,72.3270197351383,5.24939439509181,1.76352923497993,0,0,0,0,0,0,13.1195729497122,0,0,1.93866549219044,3.4324196319885,0,0.520855522170466,0,6.52499617891314,0,1.01701460117107,0,2.41320361269025,0,0.173624994933292,7.97167247232455,2.17073589525734,1.52581736317083,5.86070077635491,1.18219047581419,5.48463492884931,0,0,43.7077468301567,0.455768223388005,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,5.97157158647103,4.77670848318032,9.77648231893801,0,0,0,7.75113029277786,56.1804353109152,5.3880822516828,0,0,0,11.8375320854817,30.247679012166,1.83643656978294,11.1208380146139,0,0.207376382794494,0,0,0,0,0,0,0,0,0,11.0077800992479,0,0,0,0,5.33439590686307,0.0882561266915003,7.6833451865381,0,0,5.31810686029381,0.391102765469606,0,5.76323085796252,0.19980960958213,0,0,1.02956998717179,0,0,0.471388069233591,0,0,0,1.15580235960608,6.60462317580768,2.73810757783986,0,3.0083580899397,0,27.6489577259532,31.165817665589,0.717873024576814,0.798716001995964,2.57535628881943,0,40.5788173819827,0,0,0,0,0,0,0,8.74752658790234,16.2082053272775,0.482259445395058,0.550157746388935,1.24632101408756,0,0.77380195455795,4.6777158626679,0,1.10327990218877,25.4929298336091,0,0,0,15.0086018538407,0.662091970365432,0.25426853765475,1.08599920350743,0,0.979762080328227,0,0,0,0,0.5862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| ||
|short_description=p1@COL21A1 | |short_description=p1@COL21A1 | ||
}} | }} |
Latest revision as of 08:43, 19 September 2015
Short description: | p1@COL21A1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COL21A1_5end |
Coexpression cluster: | C4618_rectum_skeletal_Fibroblast_aorta_skin_throat_pleomorphic |
Association with transcript: | 0bp_to_ENST00000370811, ENST00000535941, NM_030820, uc003pcs.2, uc003pct.1, uc011dxi.1_5end |
EntrezGene: | COL21A1 |
HGNC: | 17025 |
UniProt: | F5GZK2Q96P44 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data