FFCP PHASE1:Hg19::chr12:56320887..56320924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84305 | |EntrezGene=84305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30258 | |HGNC=30258 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BRP8 | |UniProt=Q9BRP8 | ||
|association_with_transcript=0bp_to_ENST00000302533,ENST00000398213,NM_001143853_5end | |association_with_transcript=0bp_to_ENST00000302533,ENST00000398213,NM_001143853_5end | ||
|cluster_id=chr12:56320887..56320924,- | |||
|description=CAGE_peak_2_at_WIBG_5end | |description=CAGE_peak_2_at_WIBG_5end | ||
|id=chr12:56320887..56320924,- | |id=chr12:56320887..56320924,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.39e-12!94;UBERON:0001016!2.39e-12!94;UBERON:0003075!1.66e-11!86;UBERON:0007284!1.66e-11!86;UBERON:0002346!3.02e-11!90;UBERON:0005743!3.03e-11!86;UBERON:0001017!7.05e-11!82;UBERON:0003056!7.82e-11!61;UBERON:0002616!2.66e-10!59;UBERON:0001049!3.94e-10!57;UBERON:0005068!3.94e-10!57;UBERON:0006241!3.94e-10!57;UBERON:0007135!3.94e-10!57;UBERON:0000955!4.26e-10!69;UBERON:0006238!4.26e-10!69;UBERON:0002780!1.01e-08!41;UBERON:0001890!1.01e-08!41;UBERON:0006240!1.01e-08!41;UBERON:0000119!1.67e-08!312;UBERON:0000483!2.32e-08!309;UBERON:0003080!2.89e-08!42;UBERON:0000025!9.09e-08!194;UBERON:0000153!1.43e-07!129;UBERON:0007811!1.43e-07!129;UBERON:0004121!1.82e-07!169;UBERON:0000924!1.93e-07!173;UBERON:0006601!1.93e-07!173;UBERON:0000064!2.34e-07!219;UBERON:0000481!2.42e-07!347;UBERON:0000033!3.40e-07!123;UBERON:0001893!3.59e-07!34;UBERON:0002020!3.76e-07!34;UBERON:0003528!3.76e-07!34;UBERON:0002791!4.95e-07!33;UBERON:0001869!7.08e-07!32;UBERON:0000956!8.20e-07!25;UBERON:0000203!8.20e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.51e-07;53!UBERON:0002616;3.51e-07;53!UBERON:0000956;6.60e-07;25!UBERON:0000203;6.60e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003075,1.88e-12,82;UBERON:0007284,1.88e-12,82;UBERON:0001016,2.46e-12,89;UBERON:0002346,3.82e-12,86;UBERON:0001017,3.08e-11,81;UBERON:0003056,3.12e-11,61;UBERON:0000073,1.04e-10,53;UBERON:0002616,1.04e-10,53;UBERON:0001049,1.44e-10,56;UBERON:0005068,1.44e-10,56;UBERON:0006241,1.44e-10,56;UBERON:0007135,1.44e-10,56;UBERON:0000955,1.77e-10,68;UBERON:0006238,1.77e-10,68;UBERON:0000119,8.94e-09,309;UBERON:0010314,9.38e-09,132;UBERON:0002780,1.01e-08,41;UBERON:0001890,1.01e-08,41;UBERON:0003080,1.01e-08,41;UBERON:0006240,1.01e-08,41;UBERON:0000483,1.25e-08,306;UBERON:0010371,3.04e-08,104;UBERON:0000025,6.61e-08,192;UBERON:0004121,9.52e-08,171;UBERON:0000924,9.52e-08,171;UBERON:0006601,9.52e-08,171;UBERON:0001893,3.59e-07,34;UBERON:0003528,3.76e-07,34;UBERON:0002020,3.76e-07,34;UBERON:0002791,5.42e-07,32;UBERON:0001869,7.08e-07,32;UBERON:0000956,8.20e-07,25;UBERON:0000203,8.20e-07,25 | |||
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| ||
|short_description=p2@WIBG | |short_description=p2@WIBG | ||
}} | }} |
Latest revision as of 08:40, 19 September 2015
Short description: | p2@WIBG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_WIBG_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000302533, ENST00000398213, NM_001143853_5end |
EntrezGene: | WIBG |
HGNC: | 30258 |
UniProt: | Q9BRP8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural plate | 1.88e-12 | 82 |
presumptive neural plate | 1.88e-12 | 82 |
nervous system | 2.46e-12 | 89 |
neurectoderm | 3.82e-12 | 86 |
central nervous system | 3.08e-11 | 81 |
pre-chordal neural plate | 3.12e-11 | 61 |
regional part of nervous system | 1.04e-10 | 53 |
regional part of brain | 1.04e-10 | 53 |
neural tube | 1.44e-10 | 56 |
neural rod | 1.44e-10 | 56 |
future spinal cord | 1.44e-10 | 56 |
neural keel | 1.44e-10 | 56 |
brain | 1.77e-10 | 68 |
future brain | 1.77e-10 | 68 |
cell layer | 8.94e-09 | 309 |
structure with developmental contribution from neural crest | 9.38e-09 | 132 |
regional part of forebrain | 1.01e-08 | 41 |
forebrain | 1.01e-08 | 41 |
anterior neural tube | 1.01e-08 | 41 |
future forebrain | 1.01e-08 | 41 |
epithelium | 1.25e-08 | 306 |
ecto-epithelium | 3.04e-08 | 104 |
tube | 6.61e-08 | 192 |
ectoderm-derived structure | 9.52e-08 | 171 |
ectoderm | 9.52e-08 | 171 |
presumptive ectoderm | 9.52e-08 | 171 |
telencephalon | 3.59e-07 | 34 |
brain grey matter | 3.76e-07 | 34 |
gray matter | 3.76e-07 | 34 |
regional part of telencephalon | 5.42e-07 | 32 |
cerebral hemisphere | 7.08e-07 | 32 |
cerebral cortex | 8.20e-07 | 25 |
pallium | 8.20e-07 | 25 |