FFCP PHASE1:Hg19::chr22:23484246..23484283,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27156 | |EntrezGene=27156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13437 | |HGNC=13437 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHP6 | |UniProt=Q9UHP6 | ||
|association_with_transcript=0bp_to_ENST00000216036_5end | |association_with_transcript=0bp_to_ENST00000216036_5end | ||
|cluster_id=chr22:23484246..23484283,- | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_RTDR1_5end | |description=CAGE_peak_1_at_RTDR1_5end | ||
Latest revision as of 08:40, 19 September 2015
| Short description: | p1@RTDR1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_RTDR1_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000216036_5end |
| EntrezGene: | RTDR1 |
| HGNC: | 13437 |
| UniProt: | Q9UHP6 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p1@RTDR1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| brain grey matter | 1.69e-60 | 34 |
| gray matter | 1.69e-60 | 34 |
| cerebral hemisphere | 1.77e-60 | 32 |
| telencephalon | 1.36e-56 | 34 |
| central nervous system | 1.42e-56 | 81 |
| regional part of nervous system | 1.12e-55 | 53 |
| regional part of brain | 1.12e-55 | 53 |
| neural tube | 1.51e-55 | 56 |
| neural rod | 1.51e-55 | 56 |
| future spinal cord | 1.51e-55 | 56 |
Showing 1 to 10 of 66 entries
