FFCP PHASE1:Hg19::chr1:186649543..186649563,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:186649543..186649563,-
|short_description=p1@PTGS2
|description=CAGE_peak_1_at_PTGS2_5end
|association_with_transcript=0bp_to_ENST00000367468,ENST000004908...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5743 | |EntrezGene=5743 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9605 | |HGNC=9605 | ||
|TSSclassifier=strong | |||
|UniProt=P35354 | |UniProt=P35354 | ||
|association_with_transcript=0bp_to_ENST00000367468,ENST00000490885,ENST00000559800,NM_000963,uc001gsb.2,uc009wyo.2_5end | |||
|cluster_id=chr1:186649543..186649563,- | |||
|coexpression_cluster_id=C532 | |||
|description=CAGE_peak_1_at_PTGS2_5end | |||
|id=chr1:186649543..186649563,- | |||
|ontology_enrichment_celltype=CL:0000860!6.29e-19!45;CL:0002057!1.53e-18!42;CL:0000766!3.63e-16!76;CL:0000557!2.57e-13!71;CL:0002009!1.06e-11!65;CL:0000839!2.93e-11!70;CL:0002194!7.70e-11!63;CL:0000576!7.70e-11!63;CL:0000040!7.70e-11!63;CL:0000559!7.70e-11!63;CL:0000359!7.61e-10!32;CL:0000192!5.19e-07!42;CL:0000514!5.19e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.78e-17;33!CL:0002057;4.78e-17;33!CL:0000473;4.27e-11;39!CL:0000234;4.27e-11;39!CL:0000359;2.50e-09;32!CL:0000576;7.00e-09;48!CL:0000766;1.96e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.56e-19,42;CL:0002057,8.56e-19,42;CL:0000473,2.62e-15,48;CL:0000234,2.62e-15,48;CL:0000766,5.03e-15,72;CL:0000557,3.40e-12,67;CL:0002009,1.38e-10,61;CL:0000839,2.59e-10,66;CL:0000359,8.60e-10,32;CL:0002194,9.74e-10,59;CL:0000576,9.74e-10,59;CL:0000040,9.74e-10,59;CL:0000559,9.74e-10,59 | |||
|ontology_enrichment_development_v019=CL:0002057;6.96e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!8.10e-20!216;UBERON:0002204!1.65e-13!167;UBERON:0000467!1.91e-12!625;UBERON:0000480!3.89e-12!626;UBERON:0002371!2.48e-11!80;UBERON:0004535!2.87e-11!110;UBERON:0001637!2.99e-11!42;UBERON:0003509!2.99e-11!42;UBERON:0004572!2.99e-11!42;UBERON:0002390!1.02e-10!102;UBERON:0003061!1.02e-10!102;UBERON:0004573!1.36e-10!33;UBERON:0004571!1.36e-10!33;UBERON:0001009!1.52e-10!113;UBERON:0004872!1.67e-10!84;UBERON:0002193!1.85e-10!112;UBERON:0004765!3.23e-10!101;UBERON:0001434!3.23e-10!101;UBERON:0001474!5.33e-10!86;UBERON:0000468!7.26e-10!659;UBERON:0000926!1.64e-09!448;UBERON:0004120!1.64e-09!448;UBERON:0006603!1.64e-09!448;UBERON:0001981!2.07e-09!60;UBERON:0007500!2.07e-09!60;UBERON:0004537!2.07e-09!60;UBERON:0006965!2.07e-09!60;UBERON:0000055!2.24e-08!69;UBERON:0000923!2.82e-08!604;UBERON:0005291!2.82e-08!604;UBERON:0006598!2.82e-08!604;UBERON:0002532!2.82e-08!604;UBERON:0002050!2.98e-08!605;UBERON:0005423!2.98e-08!605;UBERON:0000479!8.24e-08!787;UBERON:0002049!9.04e-08!79;UBERON:0007798!9.04e-08!79;UBERON:0000922!1.96e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.12e-09;33!UBERON:0004571;1.12e-09;33!UBERON:0001637;4.17e-08;42!UBERON:0003509;4.17e-08;42!UBERON:0004572;4.17e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.27e-20,203;UBERON:0000926,3.48e-12,315;UBERON:0004120,3.48e-12,315;UBERON:0006603,3.48e-12,315;UBERON:0002204,1.08e-11,167;UBERON:0001637,2.14e-11,42;UBERON:0003509,2.14e-11,42;UBERON:0004572,2.14e-11,42;UBERON:0002050,2.46e-11,564;UBERON:0004573,9.94e-11,33;UBERON:0004571,9.94e-11,33;UBERON:0000923,1.14e-10,560;UBERON:0010316,1.14e-10,560;UBERON:0005291,1.14e-10,560;UBERON:0006598,1.14e-10,560;UBERON:0010317,1.14e-10,560;UBERON:0002532,1.14e-10,560;UBERON:0004535,1.85e-10,109;UBERON:0002371,3.42e-10,76;UBERON:0004872,3.52e-10,83;UBERON:0005423,7.70e-10,581;UBERON:0002390,8.82e-10,98;UBERON:0003061,8.82e-10,98;UBERON:0001009,1.17e-09,112;UBERON:0002193,1.76e-09,108;UBERON:0004765,3.10e-09,90;UBERON:0001474,5.48e-09,82;UBERON:0007500,5.62e-09,59;UBERON:0001981,5.62e-09,59;UBERON:0004537,5.62e-09,59;UBERON:0006965,5.62e-09,59;UBERON:0001434,8.03e-09,100;UBERON:0000922,2.60e-08,592;UBERON:0000055,5.88e-08,68;UBERON:0002405,8.29e-08,93;UBERON:0000479,2.70e-07,773;UBERON:0002049,4.92e-07,78;UBERON:0007798,4.92e-07,78 | |||
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| ||
|short_description=p1@PTGS2 | |||
}} | }} |
Latest revision as of 08:24, 19 September 2015
Short description: | p1@PTGS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTGS2_5end |
Coexpression cluster: | C532_Mast_CD14_Eosinophils_seminal_ductus_Neutrophils_Smooth |
Association with transcript: | 0bp_to_ENST00000367468, ENST00000490885, ENST00000559800, NM_000963, uc001gsb.2, uc009wyo.2_5end |
EntrezGene: | PTGS2 |
HGNC: | 9605 |
UniProt: | P35354 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.56e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.56e-19 | 42 |
defensive cell | 2.62e-15 | 48 |
phagocyte | 2.62e-15 | 48 |
myeloid leukocyte | 5.03e-15 | 72 |
granulocyte monocyte progenitor cell | 3.40e-12 | 67 |
macrophage dendritic cell progenitor | 1.38e-10 | 61 |
myeloid lineage restricted progenitor cell | 2.59e-10 | 66 |
vascular associated smooth muscle cell | 8.60e-10 | 32 |
monopoietic cell | 9.74e-10 | 59 |
monocyte | 9.74e-10 | 59 |
monoblast | 9.74e-10 | 59 |
promonocyte | 9.74e-10 | 59 |