FFCP PHASE1:Hg19::chr6:54711509..54711522,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=222584 | |EntrezGene=222584 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21357 | |HGNC=21357 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T0W9 | |UniProt=Q5T0W9 | ||
|association_with_transcript=-46bp_to_ENST00000306858,NM_001010872,uc003pck.2_5end | |association_with_transcript=-46bp_to_ENST00000306858,NM_001010872,uc003pck.2_5end | ||
|cluster_id=chr6:54711509..54711522,+ | |||
|coexpression_cluster_id=C4617 | |||
|description=CAGE_peak_2_at_FAM83B_5end | |description=CAGE_peak_2_at_FAM83B_5end | ||
|id=chr6:54711509..54711522,+ | |id=chr6:54711509..54711522,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.74e-33!254;CL:0002076!5.48e-23!43;CL:0000223!3.76e-17!59;CL:0002251!6.39e-15!21;CL:0002159!1.68e-09!13;CL:0002368!5.98e-09!13;CL:0000039!6.01e-07!7;CL:0000586!6.01e-07!7 | |ontology_enrichment_celltype=CL:0000066!1.74e-33!254;CL:0002076!5.48e-23!43;CL:0000223!3.76e-17!59;CL:0002251!6.39e-15!21;CL:0002159!1.68e-09!13;CL:0002368!5.98e-09!13;CL:0000039!6.01e-07!7;CL:0000586!6.01e-07!7 | ||
|ontology_enrichment_celltype_v019=CL:0002076;3.03e-21;42!CL:0002251;1.11e-18;20!CL:0002368;1.47e-10;13!CL:0002159;4.26e-10;14!CL:0000622;2.15e-09;5!CL:0000154;9.35e-08;6!CL:0002621;1.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,5.18e-27,42;CL:0000066,8.16e-23,253;CL:0000223,6.59e-21,58;CL:0002251,4.13e-19,20;CL:0002368,1.31e-10,13;CL:0002159,5.17e-10,14;CL:0000622,1.23e-09,5;CL:0000154,5.94e-08,6;CL:0002621,1.12e-07,3;CL:0000076,1.14e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000223;1.31e-10;58 | |||
|ontology_enrichment_disease=DOID:305!4.89e-27!106;DOID:0050687!2.29e-18!143;DOID:1749!2.10e-13!14;DOID:299!1.07e-10!25 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.70e-19;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,2.11e-19,14;DOID:305,1.62e-10,106;DOID:0050687,1.63e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!7.28e-27!169;UBERON:0000925!7.28e-27!169;UBERON:0006595!7.28e-27!169;UBERON:0001007!6.08e-21!155;UBERON:0001555!6.08e-21!155;UBERON:0007026!6.08e-21!155;UBERON:0001004!1.91e-17!72;UBERON:0004921!1.28e-16!129;UBERON:0004185!1.28e-16!129;UBERON:0000077!1.39e-15!130;UBERON:0000065!9.81e-14!53;UBERON:0000161!1.01e-10!35;UBERON:0000072!3.38e-10!46;UBERON:0001041!3.38e-10!98;UBERON:0008947!3.51e-09!38;UBERON:0003258!3.51e-09!38;UBERON:0000166!1.34e-08!21;UBERON:0000464!3.28e-08!104;UBERON:0000344!3.39e-08!12;UBERON:0005631!8.68e-08!14;UBERON:0000158!8.68e-08!14;UBERON:0005911!1.69e-07!82;UBERON:0001557!4.94e-07!19;UBERON:0000062!5.98e-07!511;UBERON:0005153!7.74e-07!37;UBERON:0003729!9.25e-07!5 | |ontology_enrichment_uberon=UBERON:0004119!7.28e-27!169;UBERON:0000925!7.28e-27!169;UBERON:0006595!7.28e-27!169;UBERON:0001007!6.08e-21!155;UBERON:0001555!6.08e-21!155;UBERON:0007026!6.08e-21!155;UBERON:0001004!1.91e-17!72;UBERON:0004921!1.28e-16!129;UBERON:0004185!1.28e-16!129;UBERON:0000077!1.39e-15!130;UBERON:0000065!9.81e-14!53;UBERON:0000161!1.01e-10!35;UBERON:0000072!3.38e-10!46;UBERON:0001041!3.38e-10!98;UBERON:0008947!3.51e-09!38;UBERON:0003258!3.51e-09!38;UBERON:0000166!1.34e-08!21;UBERON:0000464!3.28e-08!104;UBERON:0000344!3.39e-08!12;UBERON:0005631!8.68e-08!14;UBERON:0000158!8.68e-08!14;UBERON:0005911!1.69e-07!82;UBERON:0001557!4.94e-07!19;UBERON:0000062!5.98e-07!511;UBERON:0005153!7.74e-07!37;UBERON:0003729!9.25e-07!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000165;1.93e-10;28!UBERON:0000161;2.19e-10;19!UBERON:0000166;2.19e-10;19!UBERON:0003729;2.75e-09;13!UBERON:0000344;1.97e-08;20!UBERON:0003343;2.11e-08;4!UBERON:0004785;2.11e-08;4!UBERON:0001555;3.01e-08;54!UBERON:0001949;1.13e-07;3!UBERON:0004921;5.42e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.11e-15,160;UBERON:0000925,7.11e-15,160;UBERON:0006595,7.11e-15,160;UBERON:0000166,2.83e-12,22;UBERON:0000161,1.61e-11,36;UBERON:0001007,1.78e-10,145;UBERON:0001555,1.78e-10,145;UBERON:0007026,1.78e-10,145;UBERON:0000165,4.06e-10,29;UBERON:0000930,4.06e-10,29;UBERON:0001004,1.02e-09,74;UBERON:0003729,2.70e-09,13;UBERON:0003102,7.05e-09,99;UBERON:0000344,1.81e-08,20;UBERON:0003343,2.20e-08,4;UBERON:0004785,2.20e-08,4;UBERON:0001949,1.12e-07,3;UBERON:0005631,1.13e-07,14;UBERON:0000158,1.13e-07,14;UBERON:0000033,7.88e-07,56 | |||
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| ||
|short_description=p2@FAM83B | |short_description=p2@FAM83B | ||
}} | }} |
Latest revision as of 08:21, 19 September 2015
Short description: | p2@FAM83B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM83B_5end |
Coexpression cluster: | C4617_immature_malignant_squamous_oral_amniotic_Keratinocyte_epidermoid |
Association with transcript: | -46bp_to_ENST00000306858, NM_001010872, uc003pck.2_5end |
EntrezGene: | FAM83B |
HGNC: | 21357 |
UniProt: | Q5T0W9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 5.18e-27 | 42 |
epithelial cell | 8.16e-23 | 253 |
endodermal cell | 6.59e-21 | 58 |
epithelial cell of alimentary canal | 4.13e-19 | 20 |
respiratory epithelial cell | 1.31e-10 | 13 |
general ecto-epithelial cell | 5.17e-10 | 14 |
acinar cell | 1.23e-09 | 5 |
protein secreting cell | 5.94e-08 | 6 |
gingival epithelial cell | 1.12e-07 | 3 |
squamous epithelial cell | 1.14e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.11e-15 | 160 |
endoderm | 7.11e-15 | 160 |
presumptive endoderm | 7.11e-15 | 160 |
oral opening | 2.83e-12 | 22 |
orifice | 1.61e-11 | 36 |
digestive system | 1.78e-10 | 145 |
digestive tract | 1.78e-10 | 145 |
primitive gut | 1.78e-10 | 145 |
mouth | 4.06e-10 | 29 |
stomodeum | 4.06e-10 | 29 |
respiratory system | 1.02e-09 | 74 |
mouth mucosa | 2.70e-09 | 13 |
surface structure | 7.05e-09 | 99 |
mucosa | 1.81e-08 | 20 |
mucosa of oral region | 2.20e-08 | 4 |
respiratory system mucosa | 2.20e-08 | 4 |
gingival epithelium | 1.12e-07 | 3 |
extraembryonic membrane | 1.13e-07 | 14 |
membranous layer | 1.13e-07 | 14 |
head | 7.88e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.11e-19 | 14 |
carcinoma | 1.62e-10 | 106 |
cell type cancer | 1.63e-07 | 143 |