FFCP PHASE1:Hg19::chr3:10206545..10206566,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:10206545..10206566,+ to FFCP PHASE1:Hg19::chr3:10206545..10206566,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3656 | |EntrezGene=3656 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6113 | |HGNC=6113 | ||
|TSSclassifier=strong | |||
|UniProt=O43187 | |UniProt=O43187 | ||
|association_with_transcript=0bp_to_ENST00000256458,NM_001570,uc003bve.1_5end | |||
|cluster_id=chr3:10206545..10206566,+ | |||
|description=CAGE_peak_3_at_IRAK2_5end | |||
|id=chr3:10206545..10206566,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.72e-10!42;CL:0000860!1.01e-09!45;CL:0000738!6.30e-08!140;CL:0000766!2.73e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.36e-14;33!CL:0002057;3.36e-14;33!CL:0000473;4.93e-12;39!CL:0000234;4.93e-12;39!CL:0000576;2.05e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.94e-13,42;CL:0002057,2.94e-13,42;CL:0000473,1.22e-12,48;CL:0000234,1.22e-12,48;CL:0000738,8.26e-11,136;CL:0000766,8.67e-11,72;CL:0000557,1.35e-09,67;CL:0002009,1.93e-09,61;CL:0002194,1.38e-08,59;CL:0000576,1.38e-08,59;CL:0000040,1.38e-08,59;CL:0000559,1.38e-08,59;CL:0000839,2.03e-08,66;CL:0002031,3.94e-08,120;CL:0002087,5.03e-08,115;CL:0000037,6.37e-08,168;CL:0000763,6.92e-08,108;CL:0000049,6.92e-08,108;CL:0002032,1.31e-07,161;CL:0000837,1.31e-07,161;CL:0000988,1.97e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;3.09e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.05e-08!112;UBERON:0002405!2.50e-07!115;UBERON:0003081!5.03e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,7.81e-12,108;UBERON:0002405,3.00e-11,93;UBERON:0002390,1.47e-09,98;UBERON:0003061,1.47e-09,98;UBERON:0003081,1.75e-08,203;UBERON:0002371,4.61e-08,76;UBERON:0001474,8.77e-07,82 | |||
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| ||
|short_description=p3@IRAK2 | |||
}} | }} |
Latest revision as of 08:21, 19 September 2015
Short description: | p3@IRAK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IRAK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000256458, NM_001570, uc003bve.1_5end |
EntrezGene: | IRAK2 |
HGNC: | 6113 |
UniProt: | O43187 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.94e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.94e-13 | 42 |
defensive cell | 1.22e-12 | 48 |
phagocyte | 1.22e-12 | 48 |
leukocyte | 8.26e-11 | 136 |
myeloid leukocyte | 8.67e-11 | 72 |
granulocyte monocyte progenitor cell | 1.35e-09 | 67 |
macrophage dendritic cell progenitor | 1.93e-09 | 61 |
monopoietic cell | 1.38e-08 | 59 |
monocyte | 1.38e-08 | 59 |
monoblast | 1.38e-08 | 59 |
promonocyte | 1.38e-08 | 59 |
myeloid lineage restricted progenitor cell | 2.03e-08 | 66 |
hematopoietic lineage restricted progenitor cell | 3.94e-08 | 120 |
nongranular leukocyte | 5.03e-08 | 115 |
hematopoietic stem cell | 6.37e-08 | 168 |
myeloid cell | 6.92e-08 | 108 |
common myeloid progenitor | 6.92e-08 | 108 |
hematopoietic oligopotent progenitor cell | 1.31e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-07 | 161 |
hematopoietic cell | 1.97e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 7.81e-12 | 108 |
immune system | 3.00e-11 | 93 |
hematopoietic system | 1.47e-09 | 98 |
blood island | 1.47e-09 | 98 |
lateral plate mesoderm | 1.75e-08 | 203 |
bone marrow | 4.61e-08 | 76 |
bone element | 8.77e-07 | 82 |