FFCP PHASE1:Hg19::chr17:27467418..27467445,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:27467418..27467445,- to FFCP PHASE1:Hg19::chr17:27467418..27467445,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=399687 | |EntrezGene=399687 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31104 | |HGNC=31104 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000528564,ENST00000529651_5end | |||
|cluster_id=chr17:27467418..27467445,- | |||
|description=CAGE_peak_3_at_MYO18A_5end | |||
|id=chr17:27467418..27467445,- | |||
|ontology_enrichment_celltype=CL:0000738!3.04e-29!140;CL:0000037!3.85e-27!172;CL:0000566!3.85e-27!172;CL:0000988!1.83e-26!182;CL:0002087!7.14e-26!119;CL:0002320!1.63e-25!365;CL:0000134!1.87e-24!358;CL:0000542!7.71e-24!53;CL:0000051!7.71e-24!53;CL:0000838!8.18e-24!52;CL:0002032!1.18e-23!165;CL:0000837!1.18e-23!165;CL:0002031!1.29e-23!124;CL:0000048!1.64e-22!430;CL:0000723!1.21e-20!436;CL:0000034!2.02e-20!444;CL:0000219!1.20e-19!390;CL:0000084!5.55e-13!25;CL:0000827!5.55e-13!25;CL:0000791!9.62e-12!18;CL:0000789!9.62e-12!18;CL:0002420!9.62e-12!18;CL:0002419!9.62e-12!18;CL:0000790!9.62e-12!18;CL:0000945!2.54e-10!24;CL:0000826!2.54e-10!24;CL:0000625!8.17e-08!11;CL:0000236!1.60e-07!14;CL:0000766!7.42e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.93e-15;53!CL:0000084;2.94e-14;25!CL:0000791;4.94e-13;18!CL:0000789;4.94e-13;18!CL:0002419;4.94e-13;18!CL:0000945;2.32e-11;24!CL:0000625;1.35e-08;11!CL:0000236;2.85e-08;13!CL:0002087;5.68e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.21e-31,136;CL:0000037,1.07e-27,168;CL:0002087,1.13e-27,115;CL:0000542,8.59e-27,53;CL:0000051,8.59e-27,53;CL:0000838,9.12e-27,52;CL:0000988,1.55e-26,177;CL:0002031,3.46e-24,120;CL:0002032,6.43e-24,161;CL:0000837,6.43e-24,161;CL:0002320,1.71e-23,361;CL:0000134,1.43e-22,354;CL:0000048,4.25e-20,427;CL:0000034,1.26e-18,441;CL:0000723,1.28e-18,433;CL:0000219,1.55e-17,386;CL:0000084,2.43e-14,25;CL:0000827,2.43e-14,25;CL:0000791,5.90e-13,18;CL:0000789,5.90e-13,18;CL:0002420,5.90e-13,18;CL:0002419,5.90e-13,18;CL:0000790,5.90e-13,18;CL:0000945,1.23e-11,24;CL:0000826,1.23e-11,24;CL:0000625,1.47e-08,11;CL:0000236,1.58e-08,14 | |||
|ontology_enrichment_development_v019=CL:0000051;1.93e-15;53!CL:0000790;4.94e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!1.05e-24!375;UBERON:0002390!2.44e-13!102;UBERON:0003061!2.44e-13!102;UBERON:0002193!6.35e-11!112;UBERON:0002204!3.07e-10!167;UBERON:0002371!1.29e-07!80;UBERON:0001474!3.21e-07!86;UBERON:0004765!3.31e-07!101;UBERON:0001434!3.31e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0002390;5.70e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,5.53e-23,371;UBERON:0002390,2.03e-12,98;UBERON:0003061,2.03e-12,98;UBERON:0002193,7.04e-11,108;UBERON:0002204,2.08e-08,167;UBERON:0002405,1.53e-07,93;UBERON:0002371,4.59e-07,76;UBERON:0001434,7.90e-07,100;UBERON:0001474,9.35e-07,82 | |||
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| ||
|short_description=p3@MYO18A | |||
}} | }} |
Latest revision as of 08:17, 19 September 2015
Short description: | p3@MYO18A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MYO18A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000528564, ENST00000529651_5end |
EntrezGene: | MYO18A |
HGNC: | 31104 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.21e-31 | 136 |
hematopoietic stem cell | 1.07e-27 | 168 |
nongranular leukocyte | 1.13e-27 | 115 |
lymphocyte | 8.59e-27 | 53 |
common lymphoid progenitor | 8.59e-27 | 53 |
lymphoid lineage restricted progenitor cell | 9.12e-27 | 52 |
hematopoietic cell | 1.55e-26 | 177 |
hematopoietic lineage restricted progenitor cell | 3.46e-24 | 120 |
hematopoietic oligopotent progenitor cell | 6.43e-24 | 161 |
hematopoietic multipotent progenitor cell | 6.43e-24 | 161 |
connective tissue cell | 1.71e-23 | 361 |
mesenchymal cell | 1.43e-22 | 354 |
multi fate stem cell | 4.25e-20 | 427 |
stem cell | 1.26e-18 | 441 |
somatic stem cell | 1.28e-18 | 433 |
motile cell | 1.55e-17 | 386 |
T cell | 2.43e-14 | 25 |
pro-T cell | 2.43e-14 | 25 |
mature alpha-beta T cell | 5.90e-13 | 18 |
alpha-beta T cell | 5.90e-13 | 18 |
immature T cell | 5.90e-13 | 18 |
mature T cell | 5.90e-13 | 18 |
immature alpha-beta T cell | 5.90e-13 | 18 |
lymphocyte of B lineage | 1.23e-11 | 24 |
pro-B cell | 1.23e-11 | 24 |
CD8-positive, alpha-beta T cell | 1.47e-08 | 11 |
B cell | 1.58e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 5.53e-23 | 371 |
hematopoietic system | 2.03e-12 | 98 |
blood island | 2.03e-12 | 98 |
hemolymphoid system | 7.04e-11 | 108 |
musculoskeletal system | 2.08e-08 | 167 |
immune system | 1.53e-07 | 93 |
bone marrow | 4.59e-07 | 76 |
skeletal system | 7.90e-07 | 100 |
bone element | 9.35e-07 | 82 |