FFCP PHASE1:Hg19::chr1:186344883..186344903,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:186344883..186344903,+ to FFCP PHASE1:Hg19::chr1:186344883..186344903,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54953 | |EntrezGene=54953 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24299 | |HGNC=24299 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFR7,C9JPX4,Q5SWX8,B4DNY0 | |UniProt=E9PFR7,C9JPX4,Q5SWX8,B4DNY0 | ||
|association_with_transcript=0bp_to_ENST00000367470,ENST00000419367,ENST00000432021,NM_001164245,NM_001164246,NM_017847,uc001grw.2,uc010poq.1,uc010por.1_5end | |||
|cluster_id=chr1:186344883..186344903,+ | |||
|coexpression_cluster_id=C3402 | |||
|description=CAGE_peak_3_at_C1orf27_5end | |||
|id=chr1:186344883..186344903,+ | |||
|ontology_enrichment_celltype=CL:0000542!2.64e-28!53;CL:0000051!2.64e-28!53;CL:0000838!1.10e-27!52;CL:0000037!1.23e-17!172;CL:0000566!1.23e-17!172;CL:0000988!3.51e-16!182;CL:0002032!2.55e-15!165;CL:0000837!2.55e-15!165;CL:0000738!3.76e-15!140;CL:0000945!5.37e-14!24;CL:0000826!5.37e-14!24;CL:0000084!5.36e-13!25;CL:0000827!5.36e-13!25;CL:0000791!3.29e-12!18;CL:0000789!3.29e-12!18;CL:0002420!3.29e-12!18;CL:0002419!3.29e-12!18;CL:0000790!3.29e-12!18;CL:0002031!5.08e-12!124;CL:0002087!7.28e-12!119;CL:0000236!1.54e-09!14;CL:0000625!2.81e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;6.58e-31;53!CL:0000945;1.61e-27;24!CL:0000791;2.27e-24;18!CL:0000789;2.27e-24;18!CL:0002419;2.27e-24;18!CL:0000084;8.14e-24;25!CL:0000236;4.50e-17;13!CL:0000625;8.13e-16;11!CL:0000624;3.82e-09;6!CL:0002087;1.10e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.44e-56,53;CL:0000051,2.44e-56,53;CL:0000838,5.27e-55,52;CL:0000988,6.81e-32,177;CL:0000037,2.35e-31,168;CL:0000738,1.43e-30,136;CL:0000945,1.37e-27,24;CL:0000826,1.37e-27,24;CL:0002032,7.81e-27,161;CL:0000837,7.81e-27,161;CL:0002031,6.73e-26,120;CL:0000791,1.86e-24,18;CL:0000789,1.86e-24,18;CL:0002420,1.86e-24,18;CL:0002419,1.86e-24,18;CL:0000790,1.86e-24,18;CL:0002087,1.88e-24,115;CL:0000084,4.51e-24,25;CL:0000827,4.51e-24,25;CL:0000236,1.05e-18,14;CL:0000625,5.36e-16,11;CL:0000624,3.99e-09,6 | |||
|ontology_enrichment_development_v019=CL:0000051;6.58e-31;53!CL:0000790;2.27e-24;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.03e-08!115;UBERON:0000178!6.76e-07!15;UBERON:0000179!6.76e-07!15;UBERON:0000463!6.76e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.95e-11;15!UBERON:0000179;1.95e-11;15!UBERON:0000463;1.95e-11;15!UBERON:0002390;7.91e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.36e-11,15;UBERON:0000179,2.36e-11,15;UBERON:0000463,2.36e-11,15 | |||
|phase1_expression=0.908391896352783,0.642301571672949,0.563817616383885,0,0,0,0,0.631719873426831,0,0,0,0.218441372130172,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0.204000691244253,0,0.572471974262113,0.410623275218653,0,3.89708369314551,2.13461532569859,3.14843125254717,2.36018566109342,1.53531759238885,0.928896739896456,0,0,0,3.02122082263176,3.2698923472107,0.293600439334847,0,1.00272223735071,1.51907609501096,0,0.32389366601898,0.515151135268373,0.145398238779565,0,0,0,0,0,0.863077176966451,0,0.47296445977717,0.689491361473237,0.645484683583826,0,0,0.272906150057846,0.674170453335254,0.306083892370903,0.320929027076094,0.639337125799041,0,0.398927315243264,0,0.290209238628584,0,0,0.251248665256743,0,0.434377689410233,0.605399502633369,0,0.316462387440884,0.211255286311942,1.06302149982522,0.419317291016752,0.44931452458598,0.150176892841506,0.803627933485401,1.14005097496499,0.59675003159727,0.91332076882317,3.51992488922645,3.27683166757279,5.33705552318133,4.26730222566507,5.20514783146816,1.72425731986345,2.64417949113945,6.67837628174755,2.27685187643779,5.28513470433845,4.20500550937752,3.96513985737078,2.80254281490768,1.05353633910031,3.73748563216283,1.17903228824749,3.90642848099067,6.35308682484577,6.19252306603822,6.15482147455153,3.89653456815823,4.34500781852177,6.77593587192126,4.2091439970888,8.39491977671548,1.92136979588513,4.29195846947598,4.27538551969558,3.59255023121603,7.24507714337631,6.22803565280654,6.68852070224283,6.27213142829861,4.07913633711238,7.66440987203842,5.84166657320471,6.83153168452658,4.14135038621326,3.90650072313851,6.65316431113862,4.81840381048873,5.88738411310325,4.99722906209383,5.91943130110042,3.28451198768419,4.63695509416885,4.01160293675261,3.76543450095277,0,0,0.255725123687061,1.0843174571537,0.50133791063589,0.144846518960824,0,0,0.378139268656271,0.443458794925128,0.614843499851882,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0,1.19245312152671,2.28797964312051,2.60020250930695,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0.760272105718513,0,0,0,0.267899184852239,0,0.225222960966644,0,0,0,5.27121669744253,0,0,0,0.506522046658319,1.05927344650575,0,0,0,0,0.74000264525148,0.311211035399766,0.269421344139376,0.163461903113459,0,0.576175924479999,0.234321431833797,0.312160076830321,0,0,0.117434498643765,0.161872944368132,0.280901613404497,0.816616685019573,0.245668634623536,0.413303124703062,0,0.494533858557114,0,0,0.841680569770331,0.125118519871964,0.831192346452549,0,0,0.150238058906597,0.113432183160021,0.538168907066586,0.427114777637135,0.423863802319124,1.20036438433761,0.515262646192195,0.257640540045629,0,1.18143432568886,0.584622030967192,1.7670364197088,0.276149695926898,0,0.710019185033229,0.201504196455281,0,0.386521706326594,0.272746120590835,0,0.121973706129595,0.530119073285941,0.116193942869518,0,0,0,0,0,0,0.928735856063958,0,1.18306800039844,0.505754070234305,0.723033089650446,0.330881918197182,1.08939722046203,0.71181185733329,0.808987848960987,0.784885860501384,0.38474715694639,0,0,0,0,0,0,0,3.09024169590255,0.245976877086227,0,0.548751427043128,0,0,0.370353780634118,0,0,0,0.115930404975077,0.821860859650752,0,0,0,0,0,0.246217006087397,0,0,0.93733833986777,0.503946384596579,0.283550194484773,0.268675568108545,0.290633938513962,0,3.4486426652716,1.40877494421162,2.90259361757081,2.16179930125442,1.2624243342638,0.190493682876507,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0.2933531432838,0.775630294546667,0,0,0.531876233169741,0,0,0,0,0.57191197463259,0,0,0,0.710783897485092,0.791951872933429,0,0.871533458600294,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0.144781306667579,0.205476322550383,0.179060963239896,2.01753259188349,3.74358444383662,4.52817907204986,5.00537841491019,0.508189248444927,0,0,0,0,0.749007023947182,0,0.828831026872071,0.36807447515742,0,0.271265023699736,0.623912584592421,0.356857977594324,0.157702415033935,0.234282829985426,0,0,0,0,0.184369168541703,0.434418072340414,0,0,5.37596867919507,3.01999881146064,2.56146138728266,0,0,0,0.496215615637554,0.920771839728375,0.280660094433074,0.896974044789907,1.02341449813341,0.64341568457443,0,0,0,0.164254312027618,0,0.116210378459959,0.120859449591622,0.802025881213139,0.552485933615378,0.34444334449382,0.364182336013434,0.393373244878272,0,0.385076685522074,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0,0,0,0.223874754722178,4.82371728621056,5.49014447152291,0,0,0.650756789328606,0.309123034943167,0.27470839445503,0.082509499920588,0,0,0,0,0.154048617114644,0,0.137836572484531,0.537101224341368,0.290033387828457,0.255679882248303,0.356128142586949,0.495854746082934,0.384380134730212,0.765676274967505,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0.318203247925937,0.78494864019923,0.359744915166629,0.274537029736055,0.235624804691373,0,0,0,0.48763373908959,0,1.05650146756755,0.272999822815972,0.424216295861138,0,0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| 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| ||
|short_description=p3@C1orf27 | |||
}} | }} |
Latest revision as of 08:02, 19 September 2015
Short description: | p3@C1orf27 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C1orf27_5end |
Coexpression cluster: | C3402_CD8_CD4_diffuse_non_cord_CD19_b |
Association with transcript: | 0bp_to_ENST00000367470, ENST00000419367, ENST00000432021, NM_001164245, NM_001164246, NM_017847, uc001grw.2, uc010poq.1, uc010por.1_5end |
EntrezGene: | C1orf27 |
HGNC: | 24299 |
UniProt: | E9PFR7C9JPX4Q5SWX8B4DNY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.44e-56 | 53 |
common lymphoid progenitor | 2.44e-56 | 53 |
lymphoid lineage restricted progenitor cell | 5.27e-55 | 52 |
hematopoietic cell | 6.81e-32 | 177 |
hematopoietic stem cell | 2.35e-31 | 168 |
leukocyte | 1.43e-30 | 136 |
lymphocyte of B lineage | 1.37e-27 | 24 |
pro-B cell | 1.37e-27 | 24 |
hematopoietic oligopotent progenitor cell | 7.81e-27 | 161 |
hematopoietic multipotent progenitor cell | 7.81e-27 | 161 |
hematopoietic lineage restricted progenitor cell | 6.73e-26 | 120 |
mature alpha-beta T cell | 1.86e-24 | 18 |
alpha-beta T cell | 1.86e-24 | 18 |
immature T cell | 1.86e-24 | 18 |
mature T cell | 1.86e-24 | 18 |
immature alpha-beta T cell | 1.86e-24 | 18 |
nongranular leukocyte | 1.88e-24 | 115 |
T cell | 4.51e-24 | 25 |
pro-T cell | 4.51e-24 | 25 |
B cell | 1.05e-18 | 14 |
CD8-positive, alpha-beta T cell | 5.36e-16 | 11 |
CD4-positive, alpha-beta T cell | 3.99e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 2.36e-11 | 15 |
haemolymphatic fluid | 2.36e-11 | 15 |
organism substance | 2.36e-11 | 15 |