FFCP PHASE1:Hg19::chrX:123480196..123480210,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4068 | |EntrezGene=4068 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10820 | |HGNC=10820 | ||
|TSSclassifier=strong | |||
|UniProt=O60880 | |UniProt=O60880 | ||
|association_with_transcript=2bp_to_ENST00000371139_5end | |association_with_transcript=2bp_to_ENST00000371139_5end | ||
|cluster_id=chrX:123480196..123480210,+ | |||
|coexpression_cluster_id=C386 | |coexpression_cluster_id=C386 | ||
|description=CAGE_peak_8_at_SH2D1A_5end | |description=CAGE_peak_8_at_SH2D1A_5end | ||
|id=chrX:123480196..123480210,+ | |id=chrX:123480196..123480210,+ | ||
|ontology_enrichment_celltype=CL:0000084!1.77e-23!25;CL:0000827!1.77e-23!25;CL:0000080!2.73e-17!6;CL:0000838!1.04e-12!52;CL:0000542!1.97e-12!53;CL:0000051!1.97e-12!53;CL:0000988!9.47e-10!182;CL:0000791!2.21e-08!18;CL:0000789!2.21e-08!18;CL:0002420!2.21e-08!18;CL:0002419!2.21e-08!18;CL:0000790!2.21e-08!18;CL:0002127!1.48e-07!1;CL:0000914!1.48e-07!1;CL:0000911!1.48e-07!1;CL:0000814!1.48e-07!1;CL:0002042!1.48e-07!1;CL:0002039!1.48e-07!1;CL:0002040!1.48e-07!1;CL:0002041!1.48e-07!1;CL:0000037!4.54e-07!172;CL:0000566!4.54e-07!172 | |ontology_enrichment_celltype=CL:0000084!1.77e-23!25;CL:0000827!1.77e-23!25;CL:0000080!2.73e-17!6;CL:0000838!1.04e-12!52;CL:0000542!1.97e-12!53;CL:0000051!1.97e-12!53;CL:0000988!9.47e-10!182;CL:0000791!2.21e-08!18;CL:0000789!2.21e-08!18;CL:0002420!2.21e-08!18;CL:0002419!2.21e-08!18;CL:0000790!2.21e-08!18;CL:0002127!1.48e-07!1;CL:0000914!1.48e-07!1;CL:0000911!1.48e-07!1;CL:0000814!1.48e-07!1;CL:0002042!1.48e-07!1;CL:0002039!1.48e-07!1;CL:0002040!1.48e-07!1;CL:0002041!1.48e-07!1;CL:0000037!4.54e-07!172;CL:0000566!4.54e-07!172 | ||
|ontology_enrichment_celltype_v019=CL:0000084;1.07e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.10e-09,25;CL:0000827,1.10e-09,25;CL:0000838,4.14e-08,52;CL:0000542,5.79e-08,53;CL:0000051,5.79e-08,53;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!3.26e-13!51;DOID:0060083!3.26e-13!51;DOID:1240!2.39e-09!39;DOID:4960!5.22e-08!1;DOID:0070004!5.22e-08!1;DOID:0060060!9.44e-08!1;DOID:0060061!9.44e-08!1;DOID:8691!9.44e-08!1 | |ontology_enrichment_disease=DOID:2531!3.26e-13!51;DOID:0060083!3.26e-13!51;DOID:1240!2.39e-09!39;DOID:4960!5.22e-08!1;DOID:0070004!5.22e-08!1;DOID:0060060!9.44e-08!1;DOID:0060061!9.44e-08!1;DOID:8691!9.44e-08!1 | ||
|ontology_enrichment_disease_v019=DOID:4960;4.61e-26;1!DOID:0070004;4.61e-26;1!DOID:2531;7.21e-13;51!DOID:0060083;7.21e-13;51!DOID:1240;4.19e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.61e-26,1;DOID:0070004,4.61e-26,1;DOID:2531,1.16e-17,51;DOID:0060083,1.16e-17,51;DOID:1240,1.08e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!3.72e-20!15;UBERON:0000179!3.72e-20!15;UBERON:0000463!3.72e-20!15;UBERON:0002370!8.93e-15!4;UBERON:0005058!8.93e-15!4;UBERON:0009113!8.93e-15!4;UBERON:0003295!8.93e-15!4;UBERON:0005562!8.93e-15!4;UBERON:0001042!4.07e-10!10;UBERON:0009145!4.07e-10!10;UBERON:0003351!5.06e-10!6;UBERON:0006562!3.29e-09!11;UBERON:0004177!1.17e-08!7;UBERON:0002372!3.17e-07!1;UBERON:0001961!3.17e-07!1;UBERON:0001744!3.17e-07!1;UBERON:0001735!3.17e-07!1;UBERON:0002193!6.17e-07!112 | |ontology_enrichment_uberon=UBERON:0000178!3.72e-20!15;UBERON:0000179!3.72e-20!15;UBERON:0000463!3.72e-20!15;UBERON:0002370!8.93e-15!4;UBERON:0005058!8.93e-15!4;UBERON:0009113!8.93e-15!4;UBERON:0003295!8.93e-15!4;UBERON:0005562!8.93e-15!4;UBERON:0001042!4.07e-10!10;UBERON:0009145!4.07e-10!10;UBERON:0003351!5.06e-10!6;UBERON:0006562!3.29e-09!11;UBERON:0004177!1.17e-08!7;UBERON:0002372!3.17e-07!1;UBERON:0001961!3.17e-07!1;UBERON:0001744!3.17e-07!1;UBERON:0001735!3.17e-07!1;UBERON:0002193!6.17e-07!112 | ||
|ontology_enrichment_uberon_v019=UBERON:0002390;1.12e-07;32!UBERON:0000178;1.65e-07;15!UBERON:0000179;1.65e-07;15!UBERON:0000463;1.65e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.70e-07,15;UBERON:0000179,1.70e-07,15;UBERON:0000463,1.70e-07,15 | |||
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|short_description=p8@SH2D1A | |short_description=p8@SH2D1A | ||
}} | }} |
Latest revision as of 08:01, 19 September 2015
Short description: | p8@SH2D1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SH2D1A_5end |
Coexpression cluster: | C386_chronic_acute_Hodgkin_NK_thymus_liver_blood |
Association with transcript: | 2bp_to_ENST00000371139_5end |
EntrezGene: | SH2D1A |
HGNC: | 10820 |
UniProt: | O60880 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.10e-09 | 25 |
pro-T cell | 1.10e-09 | 25 |
lymphoid lineage restricted progenitor cell | 4.14e-08 | 52 |
lymphocyte | 5.79e-08 | 53 |
common lymphoid progenitor | 5.79e-08 | 53 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 1.70e-07 | 15 |
haemolymphatic fluid | 1.70e-07 | 15 |
organism substance | 1.70e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.61e-26 | 1 |
myeloma | 4.61e-26 | 1 |
hematologic cancer | 1.16e-17 | 51 |
immune system cancer | 1.16e-17 | 51 |
leukemia | 1.08e-10 | 39 |