FFCP PHASE1:Hg19::chr14:23341013..23341067,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23341013..23341067,+
|short_description=p1@LRP10
|description=CAGE_peak_1_at_LRP10_5end
|association_with_transcript=53bp_to_NM_014045,uc001whd.2_5end
|E...") |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26020 | |EntrezGene=26020 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14553 | |HGNC=14553 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z4F1 | |UniProt=Q7Z4F1 | ||
|association_with_transcript=53bp_to_NM_014045,uc001whd.2_5end | |||
|cluster_id=chr14:23341013..23341067,+ | |||
|coexpression_cluster_id=C3413 | |||
|description=CAGE_peak_1_at_LRP10_5end | |||
|id=chr14:23341013..23341067,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.71e-17!119;CL:0000055!5.65e-17!180;CL:0002371!1.25e-16!591;CL:0000220!2.39e-14!246;CL:0000192!4.53e-14!42;CL:0000514!4.53e-14!42;CL:0002321!1.61e-13!248;CL:0000144!3.11e-13!625;CL:0000359!4.70e-13!32;CL:0000183!6.90e-13!59;CL:0000680!5.05e-12!57;CL:0000056!5.05e-12!57;CL:0000355!5.05e-12!57;CL:0000548!1.88e-11!679;CL:0000004!1.88e-11!679;CL:0000255!1.88e-11!679;CL:0000187!2.68e-11!54;CL:0000012!1.61e-10!682;CL:0000057!1.98e-10!75;CL:0000003!4.59e-08!722;CL:0000393!6.26e-08!60;CL:0000211!6.26e-08!60;CL:0000115!5.06e-07!35;CL:0002078!5.31e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.89e-12;32!CL:0000192;1.35e-10;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.64e-18,121;CL:0000192,2.81e-14,43;CL:0000514,2.81e-14,43;CL:0002321,6.22e-14,250;CL:0000359,4.70e-13,32;CL:0000680,3.06e-12,58;CL:0000056,3.06e-12,58;CL:0000355,3.06e-12,58;CL:0000187,1.63e-11,55;CL:0000057,9.30e-11,76;CL:0000393,3.96e-08,61;CL:0000211,3.96e-08,61;CL:0000115,2.98e-07,36;CL:0002078,3.18e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;1.35e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.46e-20!118;UBERON:0004535!3.12e-19!110;UBERON:0000926!4.85e-19!448;UBERON:0004120!4.85e-19!448;UBERON:0006603!4.85e-19!448;UBERON:0001009!6.99e-19!113;UBERON:0001637!1.87e-17!42;UBERON:0003509!1.87e-17!42;UBERON:0004572!1.87e-17!42;UBERON:0000055!1.95e-17!69;UBERON:0002049!2.58e-17!79;UBERON:0007798!2.58e-17!79;UBERON:0001981!8.35e-17!60;UBERON:0007500!8.35e-17!60;UBERON:0004537!8.35e-17!60;UBERON:0006965!8.35e-17!60;UBERON:0002100!1.51e-16!216;UBERON:0004872!5.36e-16!84;UBERON:0005256!1.20e-15!143;UBERON:0004573!1.66e-14!33;UBERON:0004571!1.66e-14!33;UBERON:0000490!5.77e-13!138;UBERON:0000468!1.34e-12!659;UBERON:0003081!7.39e-12!216;UBERON:0000486!1.24e-11!82;UBERON:0000480!1.83e-11!626;UBERON:0000467!1.92e-11!625;UBERON:0000914!4.08e-11!83;UBERON:0002329!4.08e-11!83;UBERON:0003077!4.08e-11!83;UBERON:0003059!4.08e-11!83;UBERON:0007282!4.08e-11!83;UBERON:0009618!4.08e-11!83;UBERON:0007285!4.08e-11!83;UBERON:0002385!1.83e-10!63;UBERON:0001015!1.83e-10!63;UBERON:0000383!1.83e-10!63;UBERON:0003104!1.88e-10!238;UBERON:0009142!1.88e-10!238;UBERON:0004290!2.27e-10!70;UBERON:0001134!2.55e-10!61;UBERON:0002036!2.55e-10!61;UBERON:0003082!2.55e-10!61;UBERON:0009569!2.77e-09!113;UBERON:0000947!7.59e-09!21;UBERON:0010191!7.59e-09!21;UBERON:0003102!3.05e-07!95;UBERON:0000923!4.03e-07!604;UBERON:0005291!4.03e-07!604;UBERON:0006598!4.03e-07!604;UBERON:0002532!4.03e-07!604;UBERON:0002050!4.50e-07!605;UBERON:0005423!4.50e-07!605;UBERON:0000475!9.69e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.39e-13;33!UBERON:0004571;2.39e-13;33!UBERON:0001637;5.29e-13;42!UBERON:0003509;5.29e-13;42!UBERON:0004572;5.29e-13;42!UBERON:0007500;3.97e-10;56!UBERON:0001981;3.97e-10;56!UBERON:0004537;3.97e-10;56!UBERON:0003914;1.21e-09;74!UBERON:0000055;7.16e-09;65!UBERON:0000947;7.70e-09;21!UBERON:0010191;7.70e-09;21!UBERON:0002049;2.13e-07;75!UBERON:0007798;2.13e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.53e-20,117;UBERON:0004535,7.40e-19,109;UBERON:0001009,1.64e-18,112;UBERON:0001637,1.87e-17,42;UBERON:0003509,1.87e-17,42;UBERON:0004572,1.87e-17,42;UBERON:0000055,4.77e-17,68;UBERON:0002049,6.21e-17,78;UBERON:0007798,6.21e-17,78;UBERON:0007500,2.06e-16,59;UBERON:0001981,2.06e-16,59;UBERON:0004537,2.06e-16,59;UBERON:0006965,2.06e-16,59;UBERON:0002100,5.88e-16,199;UBERON:0000926,9.37e-16,315;UBERON:0004120,9.37e-16,315;UBERON:0006603,9.37e-16,315;UBERON:0004872,1.25e-15,83;UBERON:0004573,1.66e-14,33;UBERON:0004571,1.66e-14,33;UBERON:0000490,1.60e-13,148;UBERON:0005256,4.11e-13,122;UBERON:0003104,5.74e-13,160;UBERON:0009142,5.74e-13,160;UBERON:0007503,9.28e-13,78;UBERON:0000486,7.65e-12,83;UBERON:0003081,8.38e-11,203;UBERON:0002385,1.13e-10,64;UBERON:0001015,1.13e-10,64;UBERON:0000383,1.13e-10,64;UBERON:0002329,1.41e-10,71;UBERON:0003059,1.41e-10,71;UBERON:0007282,1.41e-10,71;UBERON:0004290,1.41e-10,71;UBERON:0009618,1.41e-10,71;UBERON:0001134,1.57e-10,62;UBERON:0002036,1.57e-10,62;UBERON:0003082,1.57e-10,62;UBERON:0007524,2.79e-10,73;UBERON:0003077,4.33e-10,72;UBERON:0007285,4.33e-10,72;UBERON:0009569,5.56e-09,112;UBERON:0000947,7.59e-09,21;UBERON:0010191,7.59e-09,21;UBERON:0003102,8.41e-08,99 | |||
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| ||
|short_description=p1@LRP10 | |||
}} | }} |
Latest revision as of 07:55, 19 September 2015
Short description: | p1@LRP10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LRP10_5end |
Coexpression cluster: | C3413_Neutrophils_Eosinophils_Mesenchymal_Smooth_Fibroblast_Osteoblast_mesenchymal |
Association with transcript: | 53bp_to_NM_014045, uc001whd.2_5end |
EntrezGene: | LRP10 |
HGNC: | 14553 |
UniProt: | Q7Z4F1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.64e-18 | 121 |
smooth muscle cell | 2.81e-14 | 43 |
smooth muscle myoblast | 2.81e-14 | 43 |
embryonic cell | 6.22e-14 | 250 |
vascular associated smooth muscle cell | 4.70e-13 | 32 |
muscle precursor cell | 3.06e-12 | 58 |
myoblast | 3.06e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.06e-12 | 58 |
muscle cell | 1.63e-11 | 55 |
fibroblast | 9.30e-11 | 76 |
electrically responsive cell | 3.96e-08 | 61 |
electrically active cell | 3.96e-08 | 61 |
endothelial cell | 2.98e-07 | 36 |
meso-epithelial cell | 3.18e-07 | 45 |