FFCP PHASE1:Hg19::chr5:95066730..95066782,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=22836 | |EntrezGene=22836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=18757 | |HGNC=18757 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=D6RG10,O94955 | |UniProt=D6RG10,O94955 | ||
|association_with_transcript=-67bp_to_ENST00000506817,NM_014899,uc003kll.2,uc003klm.2_5end | |association_with_transcript=-67bp_to_ENST00000506817,NM_014899,uc003kll.2,uc003klm.2_5end | ||
|cluster_id=chr5:95066730..95066782,+ | |||
|coexpression_cluster_id=C1085 | |coexpression_cluster_id=C1085 | ||
|description=CAGE_peak_4_at_RHOBTB3_5end | |description=CAGE_peak_4_at_RHOBTB3_5end |
Latest revision as of 07:44, 19 September 2015
Short description: | p4@RHOBTB3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RHOBTB3_5end |
Coexpression cluster: | C1085_liposarcoma_placenta_Olfactory_amniotic_Hair_mesothelioma_Smooth |
Association with transcript: | -67bp_to_ENST00000506817, NM_014899, uc003kll.2, uc003klm.2_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | D6RG10O94955 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p4@RHOBTB3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 2.93e-16 | 58 |
myoblast | 2.93e-16 | 58 |
multi-potent skeletal muscle stem cell | 2.93e-16 | 58 |
muscle cell | 8.22e-16 | 55 |
electrically responsive cell | 9.42e-14 | 61 |
electrically active cell | 9.42e-14 | 61 |
smooth muscle cell | 3.02e-13 | 43 |
smooth muscle myoblast | 3.02e-13 | 43 |
fibroblast | 1.06e-11 | 76 |
mesodermal cell | 6.01e-11 | 121 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
epithelium | 2.17e-15 | 306 |
cell layer | 2.54e-15 | 309 |
dense mesenchyme tissue | 9.40e-15 | 73 |
skeletal muscle tissue | 1.44e-14 | 62 |
striated muscle tissue | 1.44e-14 | 62 |
myotome | 1.44e-14 | 62 |
paraxial mesoderm | 2.22e-14 | 72 |
presumptive paraxial mesoderm | 2.22e-14 | 72 |
somite | 3.67e-14 | 71 |
presomitic mesoderm | 3.67e-14 | 71 |
Showing 1 to 10 of 33 entries