FFCP PHASE1:Hg19::chr5:95053322..95053347,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22836 | |EntrezGene=22836 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18757 | |HGNC=18757 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000504949,uc003klk.1_5end | |association_with_transcript=0bp_to_ENST00000504949,uc003klk.1_5end | ||
|cluster_id=chr5:95053322..95053347,+ | |||
|coexpression_cluster_id=C34 | |coexpression_cluster_id=C34 | ||
|description=CAGE_peak_14_at_RHOBTB3_5end | |description=CAGE_peak_14_at_RHOBTB3_5end | ||
|id=chr5:95053322..95053347,+ | |id=chr5:95053322..95053347,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.75e-15!5;CL:0000457!1.75e-15!5;CL:0002191!1.75e-15!5;CL:0000097!1.75e-15!5;CL:0000831!1.75e-15!5;CL:0002028!1.75e-15!5;CL:0000163!2.19e-08!9;CL:0002594!1.58e-07!4;CL:0000359!4.10e-07!32;CL:0002539!5.68e-07!10 | |ontology_enrichment_celltype=CL:0002274!1.75e-15!5;CL:0000457!1.75e-15!5;CL:0002191!1.75e-15!5;CL:0000097!1.75e-15!5;CL:0000831!1.75e-15!5;CL:0002028!1.75e-15!5;CL:0000163!2.19e-08!9;CL:0002594!1.58e-07!4;CL:0000359!4.10e-07!32;CL:0002539!5.68e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000097;9.51e-55;5!CL:0000163;1.75e-30;9!CL:0002594;2.34e-25;4!CL:0000151;4.44e-07;36!CL:0002589;6.42e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,7.61e-55,5;CL:0002028,7.61e-55,5;CL:0000163,1.55e-30,9;CL:0002594,2.54e-25,4;CL:0000151,1.35e-07,36;CL:0002589,6.42e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.03e-13;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001310!1.58e-07!4;UBERON:0001637!3.21e-07!42;UBERON:0003509!3.21e-07!42;UBERON:0004572!3.21e-07!42;UBERON:0002119!4.17e-07!4;UBERON:0004531!4.17e-07!4;UBERON:0004237!5.68e-07!10;UBERON:0004695!5.68e-07!10;UBERON:0002111!5.68e-07!10;UBERON:0004178!5.68e-07!10 | |ontology_enrichment_uberon=UBERON:0001310!1.58e-07!4;UBERON:0001637!3.21e-07!42;UBERON:0003509!3.21e-07!42;UBERON:0004572!3.21e-07!42;UBERON:0002119!4.17e-07!4;UBERON:0004531!4.17e-07!4;UBERON:0004237!5.68e-07!10;UBERON:0004695!5.68e-07!10;UBERON:0002111!5.68e-07!10;UBERON:0004178!5.68e-07!10 | ||
|ontology_enrichment_uberon_v019=UBERON:0001310;2.34e-25;4!UBERON:0010260;1.26e-11;9!UBERON:0001529;6.42e-07;2!UBERON:0007204;6.42e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,2.54e-25,4;UBERON:0010260,1.31e-11,9;UBERON:0003124,2.60e-07,7;UBERON:0001529,6.42e-07,2;UBERON:0007204,6.42e-07,2 | |||
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| |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0.602694528023977,0.730310090387373,0.975865597581014,0,0,0,0,0.136874425072884,0,0.0764134057479513,0,0,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829050053357545,0.289803085735052,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46331618947972,4.4024217006613,2.48793738648926,2.30591925467138,1.8936365013957,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,10.9223472346586,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0.127612712494584,0,0,0,0,0.308033580176089,0,0,4.26245703939016,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,4.05820753925408,1.239293992399,0,0,0,2.85336841185,0,0,0,0,0,0,0,0,10.3558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7812832832557,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,9.20196712238782,0,0.683652335082007,0,0,0,0,0.457987967009312,1.5991043280559,0,0,0,0,0.19606253431774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0,0.794858446811959,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69968137280189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318593534327405,7.19684979461767,0.465788870628778,0,0,0,0,0.380805212168795,0,0,0,0,1.19428766609585,0,0,0,0,0,0,0,0,0.694567422971502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558644917973244,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,19.0710095849673,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.387533459016037,0.620747142958579,0,0,0,0,0.342233301085281,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p14@RHOBTB3 | |short_description=p14@RHOBTB3 | ||
}} | }} |
Latest revision as of 07:41, 19 September 2015
Short description: | p14@RHOBTB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_RHOBTB3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000504949, uc003klk.1_5end |
EntrezGene: | RHOBTB3 |
HGNC: | 18757 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 7.61e-55 | 5 |
basophil mast progenitor cell | 7.61e-55 | 5 |
endocrine cell | 1.55e-30 | 9 |
smooth muscle cell of the umbilical artery | 2.54e-25 | 4 |
secretory cell | 1.35e-07 | 36 |
smooth muscle cell of the brachiocephalic vasculature | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 2.54e-25 | 4 |
umbilical blood vessel | 1.31e-11 | 9 |
chorion | 2.60e-07 | 7 |
brachiocephalic artery | 6.42e-07 | 2 |
brachiocephalic vasculature | 6.42e-07 | 2 |