FFCP PHASE1:Hg19::chr1:78354297..78354320,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt=Q0ZGT2 | |UniProt=Q0ZGT2 | ||
|association_with_transcript=0bp_to_ENST00000334785_5end | |association_with_transcript=0bp_to_ENST00000334785_5end | ||
|cluster_id=chr1:78354297..78354320,+ | |||
|coexpression_cluster_id=C933 | |coexpression_cluster_id=C933 | ||
|description=CAGE_peak_1_at_NEXN_5end | |description=CAGE_peak_1_at_NEXN_5end | ||
|id=chr1:78354297..78354320,+ | |id=chr1:78354297..78354320,+ | ||
|ontology_enrichment_celltype=CL:0002620;1.56e-07;23!CL:0000187;2.27e-07;55!CL:0000136;5.16e-07;13!CL:0000057;5.34e-07;73 | |ontology_enrichment_celltype=CL:0000055!2.08e-25!180;CL:0000057!1.05e-15!75;CL:0000680!1.86e-12!57;CL:0000056!1.86e-12!57;CL:0000355!1.86e-12!57;CL:0000187!2.25e-11!54;CL:0000183!1.73e-10!59;CL:0000393!2.07e-10!60;CL:0000211!2.07e-10!60;CL:0000192!9.19e-08!42;CL:0000514!9.19e-08!42;CL:0000136!2.11e-07!15;CL:0002620!2.78e-07!23;CL:0000222!7.56e-07!119 | ||
| | |ontology_enrichment_celltype_v019=CL:0002620;1.56e-07;23!CL:0000187;2.27e-07;55!CL:0000136;5.16e-07;13!CL:0000057;5.34e-07;73 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.48e-17,76;CL:0000680,4.29e-13,58;CL:0000056,4.29e-13,58;CL:0000355,4.29e-13,58;CL:0000187,6.15e-12,55;CL:0000393,3.33e-10,61;CL:0000211,3.33e-10,61;CL:0000192,4.42e-08,43;CL:0000514,4.42e-08,43;CL:0000136,7.40e-08,15;CL:0002620,9.96e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000355;2.38e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002385;5.53e-12;31!UBERON:0001015;5.53e-12;31!UBERON:0000383;5.53e-12;31!UBERON:0007100;2.52e-10;25!UBERON:0000948;2.22e-08;22!UBERON:0001134;2.34e-08;16!UBERON:0002036;2.34e-08;16!UBERON:0002204;6.27e-07;70 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.33e-17!83;UBERON:0002329!1.33e-17!83;UBERON:0003077!1.33e-17!83;UBERON:0003059!1.33e-17!83;UBERON:0007282!1.33e-17!83;UBERON:0009618!1.33e-17!83;UBERON:0007285!1.33e-17!83;UBERON:0000475!2.47e-17!365;UBERON:0000481!2.23e-16!347;UBERON:0002385!1.25e-15!63;UBERON:0001015!1.25e-15!63;UBERON:0000383!1.25e-15!63;UBERON:0004290!1.06e-14!70;UBERON:0001134!1.12e-14!61;UBERON:0002036!1.12e-14!61;UBERON:0003082!1.12e-14!61;UBERON:0000468!2.12e-14!659;UBERON:0005256!2.31e-14!143;UBERON:0000486!1.74e-12!82;UBERON:0003104!5.55e-12!238;UBERON:0009142!5.55e-12!238;UBERON:0002100!6.00e-12!216;UBERON:0000467!6.09e-11!625;UBERON:0007023!9.90e-11!115;UBERON:0000480!1.02e-10!626;UBERON:0003102!1.74e-10!95;UBERON:0001009!4.15e-10!113;UBERON:0007100!1.17e-09!27;UBERON:0004535!6.32e-09!110;UBERON:0000477!1.48e-08!286;UBERON:0003103!5.13e-08!69;UBERON:0000948!6.88e-08!24;UBERON:0005498!6.88e-08!24;UBERON:0004140!6.88e-08!24;UBERON:0009881!6.88e-08!24;UBERON:0004141!6.88e-08!24;UBERON:0003084!6.88e-08!24;UBERON:0007005!6.88e-08!24;UBERON:0004139!6.88e-08!24;UBERON:0004291!6.88e-08!24;UBERON:0004872!7.79e-08!84;UBERON:0000119!1.69e-07!312;UBERON:0000483!2.46e-07!309;UBERON:0000490!5.94e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;5.53e-12;31!UBERON:0001015;5.53e-12;31!UBERON:0000383;5.53e-12;31!UBERON:0007100;2.52e-10;25!UBERON:0000948;2.22e-08;22!UBERON:0001134;2.34e-08;16!UBERON:0002036;2.34e-08;16!UBERON:0002204;6.27e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002385,1.76e-16,64;UBERON:0001015,1.76e-16,64;UBERON:0000383,1.76e-16,64;UBERON:0007524,7.78e-16,73;UBERON:0002329,1.62e-15,71;UBERON:0003059,1.62e-15,71;UBERON:0007282,1.62e-15,71;UBERON:0004290,1.62e-15,71;UBERON:0009618,1.62e-15,71;UBERON:0001134,1.83e-15,62;UBERON:0002036,1.83e-15,62;UBERON:0003082,1.83e-15,62;UBERON:0003077,1.88e-15,72;UBERON:0007285,1.88e-15,72;UBERON:0003104,4.39e-14,160;UBERON:0009142,4.39e-14,160;UBERON:0007503,8.52e-14,78;UBERON:0000486,9.98e-13,83;UBERON:0005256,1.29e-12,122;UBERON:0003102,5.59e-11,99;UBERON:0007100,2.75e-10,27;UBERON:0002100,7.28e-09,199;UBERON:0000948,2.21e-08,24;UBERON:0005498,2.21e-08,24;UBERON:0004140,2.21e-08,24;UBERON:0009881,2.21e-08,24;UBERON:0004141,2.21e-08,24;UBERON:0003084,2.21e-08,24;UBERON:0007005,2.21e-08,24;UBERON:0004139,2.21e-08,24;UBERON:0004291,2.21e-08,24;UBERON:0001009,3.10e-08,112;UBERON:0007023,1.14e-07,114;UBERON:0004535,4.01e-07,109;UBERON:0000490,6.96e-07,148;UBERON:0003103,6.99e-07,68 | |||
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| ||
|short_description=p1@NEXN | |short_description=p1@NEXN | ||
}} | }} |
Latest revision as of 07:37, 19 September 2015
Short description: | p1@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEXN_5end |
Coexpression cluster: | C933_skeletal_heart_left_penis_Cardiac_Preadipocyte_tongue |
Association with transcript: | 0bp_to_ENST00000334785_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | Q0ZGT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.48e-17 | 76 |
muscle precursor cell | 4.29e-13 | 58 |
myoblast | 4.29e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.29e-13 | 58 |
muscle cell | 6.15e-12 | 55 |
electrically responsive cell | 3.33e-10 | 61 |
electrically active cell | 3.33e-10 | 61 |
smooth muscle cell | 4.42e-08 | 43 |
smooth muscle myoblast | 4.42e-08 | 43 |
fat cell | 7.40e-08 | 15 |
skin fibroblast | 9.96e-08 | 23 |