FFCP PHASE1:Hg19::chr1:78353949..78353981,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91624 | |EntrezGene=91624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29557 | |HGNC=29557 | ||
|TSSclassifier=strong | |||
|UniProt=E7ETM8 | |UniProt=E7ETM8 | ||
|association_with_transcript=-216bp_to_ENST00000401035_5end | |association_with_transcript=-216bp_to_ENST00000401035_5end | ||
|cluster_id=chr1:78353949..78353981,+ | |||
|description=CAGE_peak_8_at_NEXN_5end | |description=CAGE_peak_8_at_NEXN_5end | ||
|id=chr1:78353949..78353981,+ | |id=chr1:78353949..78353981,+ | ||
|ontology_enrichment_celltype=CL:0000055!2.10e-23!180;CL:0000057!2.89e-17!75;CL:0002620!9.35e-08!23;CL:0000136!3.38e-07!15 | |ontology_enrichment_celltype=CL:0000055!2.10e-23!180;CL:0000057!2.89e-17!75;CL:0002620!9.35e-08!23;CL:0000136!3.38e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002334;8.73e-08;12!CL:0002615;2.99e-07;3!CL:0000136;3.50e-07;13!CL:0002580;4.44e-07;3!CL:0002579;4.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.17e-15,76;CL:0002334,1.01e-07,12;CL:0002615,1.68e-07,3;CL:0002580,3.99e-07,3;CL:0002579,9.59e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.31e-10!83;UBERON:0002329!6.31e-10!83;UBERON:0003077!6.31e-10!83;UBERON:0003059!6.31e-10!83;UBERON:0007282!6.31e-10!83;UBERON:0009618!6.31e-10!83;UBERON:0007285!6.31e-10!83;UBERON:0000475!2.09e-09!365;UBERON:0007100!2.23e-09!27;UBERON:0004290!1.23e-07!70;UBERON:0000948!1.73e-07!24;UBERON:0005498!1.73e-07!24;UBERON:0004140!1.73e-07!24;UBERON:0009881!1.73e-07!24;UBERON:0004141!1.73e-07!24;UBERON:0003084!1.73e-07!24;UBERON:0007005!1.73e-07!24;UBERON:0004139!1.73e-07!24;UBERON:0004291!1.73e-07!24;UBERON:0003102!2.07e-07!95;UBERON:0000481!2.65e-07!347;UBERON:0000468!3.36e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.12e-12;6!UBERON:0002358;1.12e-12;6!UBERON:0003684;1.12e-12;6!UBERON:0001178;1.12e-12;6!UBERON:0007100;2.94e-10;25!UBERON:0004457;3.58e-08;9!UBERON:0000042;3.58e-08;9!UBERON:0000075;2.38e-07;16!UBERON:0001434;3.34e-07;36!UBERON:0011135;5.34e-07;5!UBERON:0002216;5.34e-07;5!UBERON:0011134;5.34e-07;5!UBERON:0002209;5.34e-07;5!UBERON:0002213;5.34e-07;5!UBERON:0007844;5.34e-07;5!UBERON:0011138;5.34e-07;5!UBERON:0001130;5.34e-07;5!UBERON:0001066;5.34e-07;5!UBERON:0001468;5.34e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.40e-12,6;UBERON:0002358,1.40e-12,6;UBERON:0003684,1.40e-12,6;UBERON:0001178,1.40e-12,6;UBERON:0007100,6.77e-11,27;UBERON:0003102,2.00e-08,99;UBERON:0000075,2.85e-07,16;UBERON:0000948,3.85e-07,24;UBERON:0005498,3.85e-07,24;UBERON:0004140,3.85e-07,24;UBERON:0009881,3.85e-07,24;UBERON:0004141,3.85e-07,24;UBERON:0003084,3.85e-07,24;UBERON:0007005,3.85e-07,24;UBERON:0004139,3.85e-07,24;UBERON:0004291,3.85e-07,24 | |||
|phase1_expression=1.45342703416445,1.2846031433459,1.69145284915165,6.00439790118782,1.34088328328186,1.74467704820074,2.53299878168311,0,0.783556884599516,0.245733936501509,0,0,0,1.11389717664042,1.32558950291166,0.672325146451775,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0.286235987131057,0.684372125364421,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0.361439152384566,0.50133791063589,1.15877215168659,0,0.486634870302636,0.283604451492204,0.665188192387692,0.527008714158756,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0.838998872419812,0.550236083880135,0.208994966536811,0,0,0,0,0,0,0,0,0.446498641420399,0,0.225222960966644,0,0,0,0,0,0,0.993943903390637,0.379891534993739,1.98613771219828,1.43418310374407,0,0.560677600142307,2.1349799145941,0.49333509683432,2.48968828319813,1.48181739276657,0.980771418680752,0.151357427644931,0.576175924479999,0.468642863667593,0.312160076830321,0,0.597794722207204,0.352303495931295,0.323745888736263,0.280901613404497,1.63323337003915,1.10550885580591,2.16984140469107,0,0.494533858557114,0,1.43723628363248,0.673344455816265,1.7516592782075,2.49357703935765,2.19488810440419,0,1.35214253015937,0.226864366320042,1.4351170855109,0.85422955527427,0,2.70081986475962,1.33968288009971,2.83404594050192,0.744467425326359,1.18143432568886,0.584622030967192,2.77677151668526,1.01254888506529,0.646584227275248,1.06502877754984,1.20902517873168,0.847802961552438,0.193260853163297,0.272746120590835,0,0.243947412259191,0.397589304964456,0.116193942869518,0.207322110030741,0.252320850875628,0,0,1.92972281457866,1.38134921352481,2.3218396401599,0.721879481669586,0,0,0.241011029883482,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0.977424915930974,0,0,0.231860809950154,0.821860859650752,0,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0.425325291727159,0.447792613514241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0.22001485746285,0.904902010304444,3.57656445851882,0.845302752556,0.26593811658487,0,0,0,0.532844358032199,0.428933980974443,0.542621605391443,0,0,1.42156779497018,0,0.301439377059586,0.871533458600294,0.99972991182057,0,0,0,0.239624855491583,0,0,0.579125226670317,0.821905290201534,0.537182889719687,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,1.10422342547226,2.00068208423871,0.271265023699736,1.03985430765404,2.14114786556594,1.26161932027148,0.819989904948992,1.20378439891088,0,2.0694614258501,0.664225598535437,0.553107505625109,0.955719759148911,0.195801157462741,0.343143423810856,0,0,0,0,0,0.30239029332968,2.23297027036899,1.68808170616869,1.12264037773229,1.15325234330131,2.04682899626681,1.12597744800525,1.48418066444991,0.462629081407967,0.355123450626254,0.246381468041427,0,0.581051892299796,0.241718899183244,0,0,0.574072240823034,1.27463817604702,0.393373244878272,0.451199612907412,0.308061348417659,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0.895499018888713,0,0,0,0.328014645699706,0.325378394664303,0.515205058238611,1.46511143709349,1.40266149865,0,0,0,0.193341436584244,0.462145851343933,1.07452572308291,0.275673144969061,2.90034661144339,1.45016693914229,0.340906509664404,0.623224249527161,0.165284915360978,0.192190067365106,0.893288987462089,0,0.464845549297286,1.5740617341532,0.6970372701606,0,0,0,0.18532421910392,0.143124886741991,0.372158369359667,0.316379424718726,0,0.255897791311334,2.99557291623744,1.27281299170375,0.78494864019923,0.899362287916574,1.92175920815238,1.88499843753098,0.404364963146632,0,0,0.48763373908959,0.487426979262569,0,1.09199929126389,1.1312434556297,1.13008116620243,0,0,0.438450885253763,0.578775534266688,3.27947376023316,0.405820753925408,0,0.281695602532241,0.573645408816206,0.88424136911809,0,1.06428319221179,0.633322905892992,0,0,0.349934720244983,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0.569647187174163,0.714695326373367,0.411362273086194,0,0.540031437238115,0,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0.242721043499027,0,0,0,0,0,0.994147647766298,0,0,0,0.211125408127993,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0.173624994933292,1.77148277162768,0,0,0.110579259931225,0.295547618953547,0.219385397153973,0,0,0.0769502585037971,0,0,0.269272933229316,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,4.54416143458391,0,0.265372693510018,0,0,0,0,0,0,0.234264445725339,0,0,0.242780379534093,0,0,0.30607276163049,0.189559738885464,0.60129367765797,0.207376382794494,0,0,0,0,0,0,0,0,0.34823682632161,0.698906672968121,0.171986032471617,0,0,0,0.290967049465258,0,0,0.274083849293502,0.19871461170299,0,0,0,0,0,0,0.458146384663663,0.343189995723929,0,0,0.235694034616795,0,0.209205692624666,0.3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| 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| ||
|short_description=p8@NEXN | |short_description=p8@NEXN | ||
}} | }} |
Latest revision as of 07:35, 19 September 2015
Short description: | p8@NEXN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_NEXN_5end |
Coexpression cluster: | NA |
Association with transcript: | -216bp_to_ENST00000401035_5end |
EntrezGene: | NEXN |
HGNC: | 29557 |
UniProt: | E7ETM8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.17e-15 | 76 |
preadipocyte | 1.01e-07 | 12 |
adipocyte of omentum tissue | 1.68e-07 | 3 |
preadipocyte of the breast | 3.99e-07 | 3 |
omentum preadipocyte | 9.59e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.40e-12 | 6 |
peritoneum | 1.40e-12 | 6 |
abdominal cavity | 1.40e-12 | 6 |
visceral peritoneum | 1.40e-12 | 6 |
primary circulatory organ | 6.77e-11 | 27 |
surface structure | 2.00e-08 | 99 |
subdivision of skeletal system | 2.85e-07 | 16 |
heart | 3.85e-07 | 24 |
primitive heart tube | 3.85e-07 | 24 |
primary heart field | 3.85e-07 | 24 |
anterior lateral plate mesoderm | 3.85e-07 | 24 |
heart tube | 3.85e-07 | 24 |
heart primordium | 3.85e-07 | 24 |
cardiac mesoderm | 3.85e-07 | 24 |
cardiogenic plate | 3.85e-07 | 24 |
heart rudiment | 3.85e-07 | 24 |