FFCP PHASE1:Hg19::chr4:89300057..89300068,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:89300057..89300068,+ to FFCP PHASE1:Hg19::chr4:89300057..89300068,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55008 | |EntrezGene=55008 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26072 | |HGNC=26072 | ||
|TSSclassifier=strong | |||
|UniProt=D6RCT4 | |UniProt=D6RCT4 | ||
|association_with_transcript=0bp_to_ENST00000504905_5end | |||
|cluster_id=chr4:89300057..89300068,+ | |||
|coexpression_cluster_id=C678 | |||
|description=CAGE_peak_7_at_HERC6_5end | |||
|id=chr4:89300057..89300068,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.72e-08;33!CL:0002057;3.72e-08;33!CL:0002166;1.72e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,1.75e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!7.77e-14!41;UBERON:0001890!7.77e-14!41;UBERON:0006240!7.77e-14!41;UBERON:0003080!3.30e-13!42;UBERON:0002020!2.22e-11!34;UBERON:0003528!2.22e-11!34;UBERON:0001893!3.16e-11!34;UBERON:0001049!3.63e-11!57;UBERON:0005068!3.63e-11!57;UBERON:0006241!3.63e-11!57;UBERON:0007135!3.63e-11!57;UBERON:0002616!4.49e-11!59;UBERON:0007023!8.18e-11!115;UBERON:0001869!9.66e-11!32;UBERON:0002791!1.33e-10!33;UBERON:0002619!1.15e-09!22;UBERON:0000956!2.29e-09!25;UBERON:0000203!2.29e-09!25;UBERON:0000955!5.13e-09!69;UBERON:0006238!5.13e-09!69;UBERON:0001950!2.00e-08!20;UBERON:0001017!3.45e-08!82;UBERON:0000153!2.88e-07!129;UBERON:0007811!2.88e-07!129;UBERON:0005743!3.56e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.56e-10;2!UBERON:0002757;1.56e-10;2!UBERON:0010134;1.56e-10;2!UBERON:0005408;1.56e-10;2!UBERON:0001899;1.56e-10;2!UBERON:0005383;2.67e-07;3!UBERON:0005382;2.67e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.90e-10,2;UBERON:0002757,1.90e-10,2;UBERON:0010134,1.90e-10,2;UBERON:0005408,1.90e-10,2;UBERON:0001899,1.90e-10,2;UBERON:0002780,9.23e-08,41;UBERON:0001890,9.23e-08,41;UBERON:0003080,9.23e-08,41;UBERON:0006240,9.23e-08,41;UBERON:0005383,2.67e-07,3;UBERON:0005382,2.67e-07,3 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0.880801318004542,0.553995408531877,0,0,0,0.32389366601898,0.257575567634187,0.290796477559129,0,0,0,0,0,0.28769239232215,0.256160706529101,0.47296445977717,0.689491361473237,0,0,0,0,0,3.06083892370903,0.962787081228281,2.55734850319616,0.659702600373432,0.199463657621632,0.852449501065388,8.12585868160035,2.8369261234557,3.11411124497787,0.502497330513487,0,0.434377689410233,11.502590550034,7.36555271975129,5.37986058649504,0,0,0.209658645508376,0.22465726229299,0,0,0,0.19891667719909,0,0,0,0.889509253863555,0,0,0,0,0,0,0,0,0,1.12101712596307,0.790152254325231,0,0,0,0.167186495390678,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0,0.512365278902701,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0.383220493601921,0,0.253019692019503,0.318565414324097,1.30216690771284,0,0.301150238155546,0.127986611154418,0,0.236777252044017,0,0.201606743224732,0,0.289648807765598,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0.392937226493138,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,1.18800285728205,0.247266929278557,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.286804595389004,0.121973706129595,0,0,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,1.10581869652794,0.185176890317059,0,0,0,0.115930404975077,0,0,0.462985512576611,0.190254152234598,0,0,0,0,0,0,1.34385702559088,2.83550194484773,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289562613335158,0.205476322550383,0,0,0.197030760201927,0.431255149719035,0.385029108839245,0,0,0,0,0.637938751653163,0,0,0,0.12269149171914,0,0,0,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0.116210378459959,0.120859449591622,0.601519410909855,0,0,0,0,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0.170093705276516,0.215915916102139,1.54227252690289,0.270946437543853,0,0.764628819135115,0.831076008928724,0,0,0,0,0,0,0.206082023295445,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,4.31247012246524,0.532306030317022,0,0,0.286249773483982,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,5.36169677188826,0,0,0,0,0,0,4.82295973779139,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.188287601553558,0,0,1.7737206141467,1.1486170010348,0.507447609232169,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.490080431962063,0,0,0,0,0,0,0.211673582723883,0.649243880549111,0.280797178113459,0,0.313359791546046,0,0,0.1605880751037,0,0.425846237690326,0.343505344755765,0.307240764308458,0,0,0.19538809540204,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.935702702041099,0.146508179271894,0,0,0,0,0,0,1.9882952955326,0.703347082052564,0.333926115068718,0.16480387422676,0,0,0,0,0,0,0.311039587661807,0.539210106883961,0.537063524026827,0,0.295930216910801,0,0,0,0.927680981618513,0,0,0,0,0,0.508507300585533,0,0,0,0,0,1.20596438625408,0,0,0,0.438770794307945,0.10893846351899,0.83654246567162,0.384751292518985,0,0,0,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,1.1713222286267,0,0.586993856796269,0,0,0,0,0.252746318513952,3.75808548536231,0.103688191397247,0,0.330991955875499,0.313932918407225,0,0.284609546029793,0,0.173559738335131,0.293977192243133,0.174118413160805,0.52418000472609,0,0,0.0730893170861856,0.328461828212837,1.35784623083787,0,0,0,0.19871461170299,0.569797163602908,7.03984977845291,0.480952921509202,0.213452994739353,0.999048047910651,0.288180834308212,0,0,0,0,0.235694034616795,0.271808412147228,0,0.101998217636322,0,0,0.136905378891993,0,0.429765441419957,0,1.39641200636127,0.229160424011684,0,0,0,0.669514372325618,0.134366944973453,0.360299883542404,0,0,0,0.0674035438541849,0,0,0.795229689809303,0.681017030557878,0,0,0.415440338029185,0,0,0.668245123238271,0,0.0788057072991982,0.209818352539992,1.90080605734932,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0.906496732161005,0.146552233678082,0,0.517131825446202,0.26446520348538,0.171086837884329,0,0,0.157204305099666,0,0,0,0,7.021753835472,0,0,0,0,0.157054096250234,1.77213635993397,0.488105059607853,0.625954653532499,0,0.554645257684261,0.620964029413834,0,0,0,0,0.4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|short_description=p7@HERC6 | |||
}} | }} |
Latest revision as of 07:32, 19 September 2015
Short description: | p7@HERC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HERC6_5end |
Coexpression cluster: | C678_Smooth_CD14_embryonic_mesothelioma_gall_Fibroblast_meningioma |
Association with transcript: | 0bp_to_ENST00000504905_5end |
EntrezGene: | HERC6 |
HGNC: | 26072 |
UniProt: | D6RCT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 1.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.90e-10 | 2 |
regional part of epithalamus | 1.90e-10 | 2 |
secretory circumventricular organ | 1.90e-10 | 2 |
circumventricular organ | 1.90e-10 | 2 |
epithalamus | 1.90e-10 | 2 |
regional part of forebrain | 9.23e-08 | 41 |
forebrain | 9.23e-08 | 41 |
anterior neural tube | 9.23e-08 | 41 |
future forebrain | 9.23e-08 | 41 |
caudate-putamen | 2.67e-07 | 3 |
dorsal striatum | 2.67e-07 | 3 |