FFCP PHASE1:Hg19::chr14:23299088..23299114,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122704 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16655 | |||
|TSSclassifier=strong | |||
|UniProt=Q86TS9,G3XCN9,G5E9P5,A6NMQ8,A8MXK5 | |||
|association_with_transcript=0bp_to_ENST00000355151,ENST00000397496,ENST00000432849,ENST00000553482,ENST00000553711,ENST00000555345,ENST00000556214,ENST00000556654,ENST00000557543,NM_178336,NM_180982,NM_181304,NM_181305,NM_181306,NM_181307,uc001wgw.3,uc001wgx.3,uc001wgy.3,uc001wgz.3,uc001wha.3,uc001whb.3_5end | |||
|cluster_id=chr14:23299088..23299114,+ | |||
|coexpression_cluster_id=C447 | |||
|description=CAGE_peak_1_at_MRPL52_5end | |||
|id=chr14:23299088..23299114,+ | |||
|ontology_enrichment_celltype=CL:0000220!5.09e-22!246;CL:0002321!1.21e-21!248;CL:0000222!1.43e-16!119;CL:0000183!1.30e-13!59;CL:0000393!3.18e-13!60;CL:0000211!3.18e-13!60;CL:0000548!2.32e-12!679;CL:0000004!2.32e-12!679;CL:0000255!2.32e-12!679;CL:0000066!4.90e-12!254;CL:0000012!5.41e-12!682;CL:0000187!7.07e-12!54;CL:0000680!3.56e-11!57;CL:0000056!3.56e-11!57;CL:0000355!3.56e-11!57;CL:0000192!2.12e-10!42;CL:0000514!2.12e-10!42;CL:0000055!2.88e-10!180;CL:0000144!1.33e-08!625;CL:0000359!1.42e-08!32;CL:0002371!3.47e-07!591;CL:1000449!4.29e-07!16;CL:0002078!8.95e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.57e-08;32!CL:0000192;4.40e-08;43!CL:0000187;1.71e-07;55!CL:1000449;8.12e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.99e-22,250;CL:0000222,2.30e-17,121;CL:0000393,1.62e-13,61;CL:0000211,1.62e-13,61;CL:0000187,3.64e-12,55;CL:0000066,8.16e-12,253;CL:0000680,1.85e-11,58;CL:0000056,1.85e-11,58;CL:0000355,1.85e-11,58;CL:0000192,1.09e-10,43;CL:0000514,1.09e-10,43;CL:0000359,1.42e-08,32;CL:0002078,3.08e-07,45;CL:0000115,3.96e-07,36;CL:1000449,8.20e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;4.40e-08;43 | |||
|ontology_enrichment_disease=DOID:14566!3.24e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.24e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0003914!1.05e-17!118;UBERON:0005256!8.32e-16!143;UBERON:0000490!1.00e-14!138;UBERON:0004290!7.95e-14!70;UBERON:0000486!1.29e-13!82;UBERON:0000914!2.31e-13!83;UBERON:0002329!2.31e-13!83;UBERON:0003077!2.31e-13!83;UBERON:0003059!2.31e-13!83;UBERON:0007282!2.31e-13!83;UBERON:0009618!2.31e-13!83;UBERON:0007285!2.31e-13!83;UBERON:0002100!1.92e-12!216;UBERON:0001981!5.31e-12!60;UBERON:0007500!5.31e-12!60;UBERON:0004537!5.31e-12!60;UBERON:0006965!5.31e-12!60;UBERON:0002049!8.22e-12!79;UBERON:0007798!8.22e-12!79;UBERON:0003104!8.44e-12!238;UBERON:0009142!8.44e-12!238;UBERON:0000055!1.61e-11!69;UBERON:0001637!2.42e-11!42;UBERON:0003509!2.42e-11!42;UBERON:0004572!2.42e-11!42;UBERON:0004872!2.46e-11!84;UBERON:0001134!2.47e-11!61;UBERON:0002036!2.47e-11!61;UBERON:0003082!2.47e-11!61;UBERON:0002385!3.07e-10!63;UBERON:0001015!3.07e-10!63;UBERON:0000383!3.07e-10!63;UBERON:0004573!1.93e-08!33;UBERON:0004571!1.93e-08!33;UBERON:0000119!1.28e-07!312;UBERON:0000483!1.79e-07!309;UBERON:0000487!2.94e-07!22;UBERON:0000353!3.62e-07!17;UBERON:0001009!4.25e-07!113;UBERON:0004211!4.29e-07!16;UBERON:0001285!4.29e-07!16;UBERON:0007684!4.29e-07!16;UBERON:0003220!4.29e-07!16;UBERON:0004208!4.29e-07!16;UBERON:0004535!6.26e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0003914;5.03e-09;74!UBERON:0001637;3.03e-08;42!UBERON:0003509;3.03e-08;42!UBERON:0004572;3.03e-08;42!UBERON:0004573;1.09e-07;33!UBERON:0004571;1.09e-07;33!UBERON:0007500;2.63e-07;56!UBERON:0001981;2.63e-07;56!UBERON:0004537;2.63e-07;56!UBERON:0000487;2.97e-07;22!UBERON:0006555;8.12e-07;15!UBERON:0004819;8.12e-07;15!UBERON:0001285;8.12e-07;15!UBERON:0007684;8.12e-07;15!UBERON:0000353;9.66e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,1.41e-17,78;UBERON:0000490,2.03e-17,148;UBERON:0003914,2.07e-17,117;UBERON:0002329,4.07e-14,71;UBERON:0003059,4.07e-14,71;UBERON:0007282,4.07e-14,71;UBERON:0004290,4.07e-14,71;UBERON:0009618,4.07e-14,71;UBERON:0005256,5.25e-14,122;UBERON:0000486,6.71e-14,83;UBERON:0007524,1.05e-13,73;UBERON:0003077,1.23e-13,72;UBERON:0007285,1.23e-13,72;UBERON:0003104,1.93e-13,160;UBERON:0009142,1.93e-13,160;UBERON:0002100,3.12e-12,199;UBERON:0007500,8.13e-12,59;UBERON:0001981,8.13e-12,59;UBERON:0004537,8.13e-12,59;UBERON:0006965,8.13e-12,59;UBERON:0002049,1.26e-11,78;UBERON:0007798,1.26e-11,78;UBERON:0001134,1.29e-11,62;UBERON:0002036,1.29e-11,62;UBERON:0003082,1.29e-11,62;UBERON:0001637,2.42e-11,42;UBERON:0003509,2.42e-11,42;UBERON:0004572,2.42e-11,42;UBERON:0000055,2.46e-11,68;UBERON:0004872,3.75e-11,83;UBERON:0002385,1.64e-10,64;UBERON:0001015,1.64e-10,64;UBERON:0000383,1.64e-10,64;UBERON:0000119,1.64e-08,309;UBERON:0004573,1.93e-08,33;UBERON:0004571,1.93e-08,33;UBERON:0000483,2.34e-08,306;UBERON:0000487,2.94e-07,22;UBERON:0001009,5.99e-07,112;UBERON:0004211,8.20e-07,15;UBERON:0009773,8.20e-07,15;UBERON:0001231,8.20e-07,15;UBERON:0001285,8.20e-07,15;UBERON:0007684,8.20e-07,15;UBERON:0004208,8.20e-07,15;UBERON:0004535,8.81e-07,109;UBERON:0000353,9.69e-07,15 | |||
|phase1_expression=66.3126084337532,82.8569027458105,47.2197253721503,156.114345430883,138.557939272459,204.127214639486,240.634884259895,118.763336204244,95.0715686647412,201.256093994736,1056.47096831026,116.866134089642,174.086205630779,78.7154004825897,157.41375347076,269.602383727162,231.434698761207,307.460548053084,283.976888896075,150.207690853681,341.089155760391,238.539043044825,75.566300602599,145.086890577257,133.702911168465,71.7521879973262,86.7803230485927,87.4476780394976,32.649234978459,24.5650814782216,21.6742572642506,468.904824484253,372.591721528695,255.869775035417,101.714434361936,78.0509086355944,85.4377278464405,35.4557061460402,37.3012672294464,39.7129893410009,54.8592911887815,47.61236890479,47.9090555799587,40.420710380719,41.9442297494578,45.3632194421216,57.8748301895155,47.6954750105318,43.0491855544194,31.0707783707923,37.9117845663069,31.925101034959,34.4745680736619,40.665535065781,33.8566216485854,40.47210300166,41.2088286587347,46.7424847645776,53.8707650572789,34.339405897142,37.7208904221434,34.6343865196052,35.1056037414072,27.2783840340924,95.1886302701756,97.590258646876,86.5722926103849,34.4210671401738,38.0682530446747,25.6282836752038,81.7289328555048,60.7658099379482,67.0900261374675,83.445838093217,58.8913910903171,85.331068721909,48.1889827618464,51.0601435661121,39.8599455008759,76.9534408101371,56.6912530017407,86.9481371919658,119.677446233699,81.9207916893197,88.0614161324919,57.181849823912,57.2566261461498,87.3623708730814,97.8346411721596,89.6810529263242,80.2590286444322,47.566212339046,61.9282629562871,83.2679370047863,56.6113648611351,80.0687617716234,23.60517241366,39.3010762749165,33.3074428379205,81.9213827414323,57.6882411941455,39.2961678759829,126.637373465142,83.446432206995,66.875540996788,57.1557448025743,49.2863032052328,167.287263561732,168.947092480282,193.543413718527,243.188015651547,77.377423891259,42.8548167538355,46.8196449156998,106.626234281076,84.4154603096868,50.2018846618517,35.7372543301935,36.6878553428279,54.4746858494205,52.7377597623699,64.6307390224894,37.6437797694432,46.9710862936715,59.966748745126,51.1438864415076,57.4789597844733,23.386382214069,24.6044980120827,34.3233837202234,258.435278292799,195.844651033462,80.8091390851112,185.056846020898,98.2622304846344,85.459446186886,85.8908822815187,82.2412930811455,87.728310328255,202.438939883321,133.245369896472,41.8478146215192,177.411805398468,304.784811968801,63.2867417626632,54.1543483000721,82.6998514427341,28.618874916641,32.6037099144673,35.2884626263087,157.618589041797,332.050553710964,174.61167230862,201.814935266871,354.89652303358,239.902932571739,209.203961503347,98.4567852435143,83.6050717313769,49.2039300764065,166.368507966078,250.129522781391,138.871310744908,172.801647762558,338.639334214576,72.779278551525,189.95184924174,181.642318019599,325.031271427672,184.157537956217,235.780644438434,9.22462922052443,3.87780264148325,186.212160264862,137.164258667908,108.902240031539,62.8943608862789,105.555876435563,156.763424931674,173.249378443973,229.510340818866,220.027453188107,37.0341132125722,169.870157479877,216.423559722219,94.4470348504372,131.94428670592,154.88646644214,233.80789754591,168.289187355613,167.083624856914,182.962948886986,195.542516796703,200.844653584215,68.799955712899,191.990037958293,67.5750608889506,77.2201857233335,134.018675668978,155.637592891403,370.088343035363,114.300221374811,113.357379004,50.7027331336055,169.445361660003,173.472092422245,130.707111248739,129.199256619264,58.8398005059467,44.2063794854435,54.678430499167,92.4280575939959,66.4688813587931,73.9428349930956,70.1660548370094,51.3080050013449,77.6572931134753,83.0507117263137,51.1797436451184,46.8773564774555,77.3920911686219,88.2588380474129,112.588233294164,128.325206500429,93.0064271214746,168.067492897956,85.9914628213647,78.8552121512837,86.5644874377912,84.3800987825115,136.505580323715,274.097996665948,217.464849938444,141.513006402435,305.278176188982,93.8023214624598,164.588521820666,112.509766837892,118.346452434827,128.217867898012,115.477789450816,112.425793151682,117.923497698215,130.516706299039,120.087536656712,116.19364139781,310.763446396977,405.298726291958,109.478687014152,330.769600617469,135.627887259359,134.647328684835,117.567191429599,209.253509122544,60.5103117632119,103.626957420309,98.775256867763,180.966822744767,127.872852907594,57.4048359982883,179.846184531299,458.611240308294,228.043520399932,55.9943856029621,71.2670774011438,87.919166686494,156.952088763471,130.894856737404,175.425376346959,200.8857619302,55.8912603818392,77.4554117610877,108.798010795349,224.023863228397,112.883990149634,158.221008522503,79.3488511147236,80.7962349068814,220.445040519996,32.5157737011323,54.149786918134,46.8561541122145,47.5595846275973,46.3309730674814,73.7210552732083,95.8790948151277,113.700923793746,171.072446022705,108.688659787413,160.082849830808,98.3242928249189,115.607147960067,182.667268841144,95.0464184239512,90.4902010304444,175.251658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| |||
|short_description=p1@MRPL52 | |||
}} |
Latest revision as of 07:29, 19 September 2015
Short description: | p1@MRPL52 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_MRPL52_5end |
Coexpression cluster: | C447_Alveolar_Bronchial_Smooth_Renal_Tracheal_Keratocytes_Hepatic |
Association with transcript: | 0bp_to_ENST00000355151, ENST00000397496, ENST00000432849, ENST00000553482, ENST00000553711, ENST00000555345, ENST00000556214, ENST00000556654, ENST00000557543, NM_178336, NM_180982, NM_181304, NM_181305, NM_181306, NM_181307, uc001wgw.3, uc001wgx.3, uc001wgy.3, uc001wgz.3, uc001wha.3, uc001whb.3_5end |
EntrezGene: | MRPL52 |
HGNC: | 16655 |
UniProt: | Q86TS9G3XCN9G5E9P5A6NMQ8A8MXK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.99e-22 | 250 |
mesodermal cell | 2.30e-17 | 121 |
electrically responsive cell | 1.62e-13 | 61 |
electrically active cell | 1.62e-13 | 61 |
muscle cell | 3.64e-12 | 55 |
epithelial cell | 8.16e-12 | 253 |
muscle precursor cell | 1.85e-11 | 58 |
myoblast | 1.85e-11 | 58 |
multi-potent skeletal muscle stem cell | 1.85e-11 | 58 |
smooth muscle cell | 1.09e-10 | 43 |
smooth muscle myoblast | 1.09e-10 | 43 |
vascular associated smooth muscle cell | 1.42e-08 | 32 |
meso-epithelial cell | 3.08e-07 | 45 |
endothelial cell | 3.96e-07 | 36 |
epithelial cell of nephron | 8.20e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.24e-07 | 239 |