FFCP PHASE1:Hg19::chr22:22599189..22599212,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7441 | |EntrezGene=7441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12709 | |HGNC=12709 | ||
|TSSclassifier=strong | |||
|UniProt=F8W8C9,P12018 | |UniProt=F8W8C9,P12018 | ||
|association_with_transcript=0bp_to_ENST00000302273,NM_007128,uc002zvx.1_5end | |association_with_transcript=0bp_to_ENST00000302273,NM_007128,uc002zvx.1_5end | ||
|cluster_id=chr22:22599189..22599212,+ | |||
|coexpression_cluster_id=C183 | |||
|description=CAGE_peak_1_at_VPREB1_5end | |description=CAGE_peak_1_at_VPREB1_5end | ||
|id=chr22:22599189..22599212,+ | |id=chr22:22599189..22599212,+ | ||
|ontology_enrichment_celltype=CL:0000236!2.38e-12!14;CL:0000945!3.04e-12!24;CL:0000826!3.04e-12!24;CL:0000838!8.65e-08!52;CL:0000817!1.22e-07!3;CL:0000542!1.31e-07!53;CL:0000051!1.31e-07!53 | |ontology_enrichment_celltype=CL:0000236!2.38e-12!14;CL:0000945!3.04e-12!24;CL:0000826!3.04e-12!24;CL:0000838!8.65e-08!52;CL:0000817!1.22e-07!3;CL:0000542!1.31e-07!53;CL:0000051!1.31e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000817;4.72e-17;1!CL:0000037;8.86e-17;1!CL:0001024;8.86e-17;1!CL:0002032;1.65e-16;1!CL:0000557;1.65e-16;1!CL:0000945;1.86e-10;24!CL:0000542;1.19e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,8.86e-17,1;CL:0000945,1.81e-10,24;CL:0000826,1.81e-10,24;CL:0000838,2.39e-07,52;CL:0000542,3.29e-07,53;CL:0000051,3.29e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000051;1.19e-07;53 | |||
|ontology_enrichment_disease=DOID:2531!1.08e-13!51;DOID:0060083!1.08e-13!51;DOID:1240!7.34e-11!39;DOID:8692!6.75e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.53e-08;8!DOID:0060058;5.59e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,1.42e-10,51;DOID:0060083,1.42e-10,51;DOID:1036,1.59e-08,8;DOID:0060058,5.43e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0001042!6.44e-08!10;UBERON:0009145!6.44e-08!10;UBERON:0006562!3.33e-07!11;UBERON:0004177!7.92e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p1@VPREB1 | |short_description=p1@VPREB1 | ||
}} | }} |
Latest revision as of 07:18, 19 September 2015
Short description: | p1@VPREB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VPREB1_5end |
Coexpression cluster: | C183_acute_non_CD34_diffuse_CD133_myeloma_Burkitt |
Association with transcript: | 0bp_to_ENST00000302273, NM_007128, uc002zvx.1_5end |
EntrezGene: | VPREB1 |
HGNC: | 12709 |
UniProt: | F8W8C9P12018 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 8.86e-17 | 1 |
lymphocyte of B lineage | 1.81e-10 | 24 |
pro-B cell | 1.81e-10 | 24 |
lymphoid lineage restricted progenitor cell | 2.39e-07 | 52 |
lymphocyte | 3.29e-07 | 53 |
common lymphoid progenitor | 3.29e-07 | 53 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 1.42e-10 | 51 |
immune system cancer | 1.42e-10 | 51 |
chronic leukemia | 1.59e-08 | 8 |
lymphoma | 5.43e-07 | 10 |