FFCP PHASE1:Hg19::chr1:78050720..78050734,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:78050720..78050734,- to FFCP PHASE1:Hg19::chr1:78050720..78050734,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26009 | |EntrezGene=26009 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24523 | |HGNC=24523 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000476195_5end | |||
|cluster_id=chr1:78050720..78050734,- | |||
|coexpression_cluster_id=C67 | |||
|description=CAGE_peak_9_at_ZZZ3_5end | |||
|id=chr1:78050720..78050734,- | |||
|ontology_enrichment_celltype=CL:0000235!6.34e-17!10;CL:0002619!1.94e-15!3;CL:0000839!1.81e-08!70;CL:0000557!2.60e-08!71;CL:0002194!3.77e-08!63;CL:0000576!3.77e-08!63;CL:0000040!3.77e-08!63;CL:0000559!3.77e-08!63;CL:0000990!4.36e-08!8;CL:0002009!7.90e-08!65;CL:0000766!1.35e-07!76;CL:0000840!2.90e-07!5;CL:0001029!2.90e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000235;1.30e-84;6!CL:0002619;6.94e-44;3!CL:0002566;1.66e-15;1!CL:0000473;3.47e-11;39!CL:0000234;3.47e-11;39!CL:0000766;1.94e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.61e-84,6;CL:0002619,6.94e-44,3;CL:0000839,2.69e-20,66;CL:0000557,5.53e-20,67;CL:0000766,1.50e-18,72;CL:0002194,1.88e-18,59;CL:0000576,1.88e-18,59;CL:0000040,1.88e-18,59;CL:0000559,1.88e-18,59;CL:0002009,7.88e-18,61;CL:0002566,1.78e-15,1;CL:0000763,4.36e-12,108;CL:0000049,4.36e-12,108;CL:0002031,8.80e-11,120;CL:0000473,1.97e-10,48;CL:0000234,1.97e-10,48;CL:0000738,2.15e-09,136;CL:0002087,4.11e-09,115;CL:0002032,9.06e-08,161;CL:0000837,9.06e-08,161;CL:0000037,2.12e-07,168;CL:0000988,5.76e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.34e-11!115;UBERON:0002370!2.46e-10!4;UBERON:0005058!2.46e-10!4;UBERON:0009113!2.46e-10!4;UBERON:0003295!2.46e-10!4;UBERON:0005562!2.46e-10!4;UBERON:0002193!2.57e-10!112;UBERON:0004177!4.16e-10!7;UBERON:0002390!4.29e-09!102;UBERON:0003061!4.29e-09!102;UBERON:0007023!2.29e-07!115;UBERON:0003408!3.34e-07!10;UBERON:0002371!4.33e-07!80;UBERON:0001042!4.51e-07!10;UBERON:0009145!4.51e-07!10;UBERON:0003351!4.87e-07!6;UBERON:0002240!5.48e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000029;2.75e-15;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.55e-17,76;UBERON:0002405,3.23e-17,93;UBERON:0001474,3.39e-16,82;UBERON:0000029,2.38e-15,1;UBERON:0002193,1.08e-14,108;UBERON:0004765,1.10e-14,90;UBERON:0002390,2.05e-13,98;UBERON:0003061,2.05e-13,98;UBERON:0001434,3.97e-13,100;UBERON:0002204,1.89e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3763081558331,20.7291946252147,16.9999874638563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,4.68008530278475,1.0404181360211,0,0,0,0,0,0,1.97065295158377,0,0,0,0,2.60341366597893,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1085183218262,5.02257091432126,14.7583757638122,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,1.28144895081234,0,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.3763081558331,20.7291946252147,16.9999874638563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0.324547393654683,0.174129737299267,0.531831842075461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.95460407304877,4.68008530278475,1.0404181360211,0,0,0,0,0,0,1.97065295158377,0,0,0,0,2.60341366597893,0,0,0,0.102827492703324,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.1085183218262,5.02257091432126,14.7583757638122,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,1.28144895081234,0,0.414239055347196,1.48849806543585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21510125100316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0.297046400327086,0.4226557275834,0,0,0.193373663920732,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0.129177819672012,0.124149428591716,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p9@ZZZ3 | |||
}} | }} |
Latest revision as of 07:15, 19 September 2015
Short description: | p9@ZZZ3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ZZZ3_5end |
Coexpression cluster: | C67_CD14_Monocytederived_Macrophage_dura_Dendritic_spleen_lung |
Association with transcript: | 0bp_to_ENST00000476195_5end |
EntrezGene: | ZZZ3 |
HGNC: | 24523 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.61e-84 | 6 |
adult endothelial progenitor cell | 6.94e-44 | 3 |
myeloid lineage restricted progenitor cell | 2.69e-20 | 66 |
granulocyte monocyte progenitor cell | 5.53e-20 | 67 |
myeloid leukocyte | 1.50e-18 | 72 |
monopoietic cell | 1.88e-18 | 59 |
monocyte | 1.88e-18 | 59 |
monoblast | 1.88e-18 | 59 |
promonocyte | 1.88e-18 | 59 |
macrophage dendritic cell progenitor | 7.88e-18 | 61 |
dark melanocyte | 1.78e-15 | 1 |
myeloid cell | 4.36e-12 | 108 |
common myeloid progenitor | 4.36e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 8.80e-11 | 120 |
defensive cell | 1.97e-10 | 48 |
phagocyte | 1.97e-10 | 48 |
leukocyte | 2.15e-09 | 136 |
nongranular leukocyte | 4.11e-09 | 115 |
hematopoietic oligopotent progenitor cell | 9.06e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.06e-08 | 161 |
hematopoietic stem cell | 2.12e-07 | 168 |
hematopoietic cell | 5.76e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.55e-17 | 76 |
immune system | 3.23e-17 | 93 |
bone element | 3.39e-16 | 82 |
lymph node | 2.38e-15 | 1 |
hemolymphoid system | 1.08e-14 | 108 |
skeletal element | 1.10e-14 | 90 |
hematopoietic system | 2.05e-13 | 98 |
blood island | 2.05e-13 | 98 |
skeletal system | 3.97e-13 | 100 |
musculoskeletal system | 1.89e-07 | 167 |