FFCP PHASE1:Hg19::chr1:186265353..186265386,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9364 | |||
|TSSclassifier=strong | |||
|UniProt=E7EQ48,Q92954 | |||
|association_with_transcript=-18bp_to_ENST00000367484,ENST00000367486,NM_001127708,NM_001127709,NM_001127710,NM_005807,uc001grt.3,uc001gru.3,uc009wyl.2,uc009wym.2_5end | |||
|cluster_id=chr1:186265353..186265386,+ | |||
|coexpression_cluster_id=C536 | |||
|description=CAGE_peak_2_at_PRG4_5end | |||
|id=chr1:186265353..186265386,+ | |||
|ontology_enrichment_celltype=CL:0000136!6.02e-18!15;CL:0002570!3.01e-07!8;CL:0000153!8.74e-07!9;CL:0000447!8.74e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000136;8.03e-27;13!CL:0002521;2.02e-14;3!CL:0002575;7.43e-10;2!CL:0000153;2.27e-08;9!CL:0000447;2.27e-08;9!CL:0000138;1.28e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,4.97e-23,15;CL:0002521,2.98e-14,3;CL:0002575,9.12e-10,2;CL:0000153,2.32e-08,9;CL:0000447,2.32e-08,9;CL:0000058,1.60e-07,6;CL:0000138,1.60e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006965;6.07e-10;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.53e-14!115;UBERON:0001013!5.11e-11!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;2.02e-14;3!UBERON:0001013;2.96e-11;14!UBERON:0002072;7.77e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002190,2.98e-14,3;UBERON:0001013,3.16e-11,14;UBERON:0002072,9.76e-09,5 | |||
|phase1_expression=0.54503513781167,1.71280419112787,0.563817616383885,0,2.23480547213644,0,5.06599756336621,6.31719873426831,1.04474251279935,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0.111410456885174,0,0,0,0.25618263945135,0.520237390239513,0,0,0,0,0,0,0.679856056185397,0,0.34362744548263,0.253019692019503,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,1.01392563272577,72.37102118165,13.6257763684738,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08665054641315,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4079531339648,13.7595810334868,2.36315962672562,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.36807447515742,0,0,0,0,0,0,0,0,0,0,0,0,2.34961388955289,1.37257369524342,0,0,0,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0.177561725313127,0.410635780069046,0,0.464841513839837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4071421764199,0,0,0,0,0,0,0,0.614014698904518,0,0,0.145016693914229,0.0852266274161009,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,1.97576935775941,0,0,0,0,0,10.0733866831154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.9881134453921,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.0927680981618513,0,0,0,2.89999830173917,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32686346755009,0,0,0,0,0.269604531922708,1.60515529459758,0,0,0,0,0,0,0,1.83241080922615,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0.290268993867255,0.365446585430928,0.0821154570532092,0.290967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.199679000498991,0,0.446342914883745,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42939065274673,0,0,0,0,0,0,0,0,0,15.5345367698767,13.2506888912221,0,0,0.342173675768659,0,1.06787412567695,0.471612915298998,2.48543433208317,0,0,0,0,3.80812462358632,6.0165574565448,4.28883807468846,1.96723578425883,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,1.79105763464249,0.467426619694449,0.554805861502613,0.189403005275089,0.251567901752575,1.77962244319307,0.457680136793847,0.453692771289717,1.70980920641059,0,0,0,0,0.414706207840855,0,0,0,0.380805212168795,0,0,0,0,0,0,0.343395705182793,0.673498977531838,0,0,0.857766365499703,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376051641746286,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0,0,0,1.98484471355718,0.703484977438482,0,1.07140367175657,0,0,0,0,0,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,1.85839014859306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,7.80237332107477,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.490296643507811,0,0,0,1.2679671827502,0,0.0939839179798536,0.128915775947154,0,0,0,0,0.730336388246517,0,0.143339583151451,0,0.0679914901909147,0,0,0.371995018166751,2.31087814315709,0,0,0,0,0,0,0,0,0.985123076837112,0,0,0,1.91910583710883,0,0.0645889098360061,0.0620747142958579,0,0.445530107947154,0,0.870866991587845,0,0.202056159043763,0.645499848534087,0.665320713092027,0,0,0,0,0,0,0,0,3.01910690386539,0 | |||
|short_description=p2@PRG4 | |||
}} |
Latest revision as of 07:10, 19 September 2015
Short description: | p2@PRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRG4_5end |
Coexpression cluster: | C536_Chondrocyte_Mallassezderived_liver_mesothelioma_Adipocyte_serous_tenocyte |
Association with transcript: | -18bp_to_ENST00000367484, ENST00000367486, NM_001127708, NM_001127709, NM_001127710, NM_005807, uc001grt.3, uc001gru.3, uc009wyl.2, uc009wym.2_5end |
EntrezGene: | PRG4 |
HGNC: | 9364 |
UniProt: | E7EQ48Q92954 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 4.97e-23 | 15 |
subcutaneous fat cell | 2.98e-14 | 3 |
central nervous system pericyte | 9.12e-10 | 2 |
GAG secreting cell | 2.32e-08 | 9 |
carbohydrate secreting cell | 2.32e-08 | 9 |
chondroblast | 1.60e-07 | 6 |
chondrocyte | 1.60e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
subcutaneous adipose tissue | 2.98e-14 | 3 |
adipose tissue | 3.16e-11 | 14 |
hypodermis | 9.76e-09 | 5 |