FFCP PHASE1:Hg19::chr17:27044810..27044873,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83871 | |EntrezGene=83871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16519 | |HGNC=16519 | ||
|TSSclassifier=strong | |||
|UniProt=A8MYQ9 | |UniProt=A8MYQ9 | ||
|association_with_transcript=0bp_to_ENST00000395242_5end | |association_with_transcript=0bp_to_ENST00000395242_5end | ||
|cluster_id=chr17:27044810..27044873,- | |||
|coexpression_cluster_id=C3622 | |||
|description=CAGE_peak_2_at_RAB34_5end | |description=CAGE_peak_2_at_RAB34_5end | ||
|id=chr17:27044810..27044873,- | |id=chr17:27044810..27044873,- | ||
|ontology_enrichment_celltype=CL:0000055!3.33e-41!180;CL:0002321!6.12e-25!248;CL:0000220!8.32e-25!246;CL:0000183!4.46e-21!59;CL:0000222!1.02e-20!119;CL:0000680!7.31e-20!57;CL:0000056!7.31e-20!57;CL:0000355!7.31e-20!57;CL:0000187!3.42e-19!54;CL:0000393!1.11e-18!60;CL:0000211!1.11e-18!60;CL:0000057!3.92e-17!75;CL:0000548!7.71e-17!679;CL:0000004!7.71e-17!679;CL:0000255!7.71e-17!679;CL:0000192!1.01e-16!42;CL:0000514!1.01e-16!42;CL:0000012!4.48e-16!682;CL:0000359!1.85e-14!32;CL:0000144!1.03e-12!625;CL:0002371!7.94e-10!591;CL:0000066!1.99e-09!254;CL:0002494!3.37e-07!16;CL:0000499!7.61e-07!27;CL:0000003!7.68e-07!722 | |ontology_enrichment_celltype=CL:0000055!3.33e-41!180;CL:0002321!6.12e-25!248;CL:0000220!8.32e-25!246;CL:0000183!4.46e-21!59;CL:0000222!1.02e-20!119;CL:0000680!7.31e-20!57;CL:0000056!7.31e-20!57;CL:0000355!7.31e-20!57;CL:0000187!3.42e-19!54;CL:0000393!1.11e-18!60;CL:0000211!1.11e-18!60;CL:0000057!3.92e-17!75;CL:0000548!7.71e-17!679;CL:0000004!7.71e-17!679;CL:0000255!7.71e-17!679;CL:0000192!1.01e-16!42;CL:0000514!1.01e-16!42;CL:0000012!4.48e-16!682;CL:0000359!1.85e-14!32;CL:0000144!1.03e-12!625;CL:0002371!7.94e-10!591;CL:0000066!1.99e-09!254;CL:0002494!3.37e-07!16;CL:0000499!7.61e-07!27;CL:0000003!7.68e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.13e-13;32!CL:0000192;5.98e-12;43!CL:0000187;1.02e-10;55!CL:0000393;1.12e-09;61!CL:0000211;1.12e-09;61!CL:0000057;9.52e-08;73!CL:0000134;2.84e-07;55!CL:0002494;2.89e-07;16!CL:0000499;4.63e-07;28!CL:0002320;4.65e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,2.03e-25,250;CL:0000222,1.39e-20,121;CL:0000680,7.54e-20,58;CL:0000056,7.54e-20,58;CL:0000355,7.54e-20,58;CL:0000187,3.64e-19,55;CL:0000393,1.11e-18,61;CL:0000211,1.11e-18,61;CL:0000057,1.53e-17,76;CL:0000192,1.24e-16,43;CL:0000514,1.24e-16,43;CL:0000359,1.28e-14,32;CL:0000066,1.60e-09,253;CL:0002494,2.86e-07,16;CL:0000499,4.17e-07,28;CL:0000221,8.19e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;5.98e-12;43!CL:0000355;1.75e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.05e-22!83;UBERON:0002329!1.05e-22!83;UBERON:0003077!1.05e-22!83;UBERON:0003059!1.05e-22!83;UBERON:0007282!1.05e-22!83;UBERON:0009618!1.05e-22!83;UBERON:0007285!1.05e-22!83;UBERON:0000486!1.64e-22!82;UBERON:0004290!5.33e-21!70;UBERON:0005256!3.02e-20!143;UBERON:0002100!1.11e-18!216;UBERON:0003104!2.19e-18!238;UBERON:0009142!2.19e-18!238;UBERON:0001134!5.45e-18!61;UBERON:0002036!5.45e-18!61;UBERON:0003082!5.45e-18!61;UBERON:0000481!5.39e-17!347;UBERON:0002385!5.47e-17!63;UBERON:0001015!5.47e-17!63;UBERON:0000383!5.47e-17!63;UBERON:0000475!3.90e-15!365;UBERON:0004872!6.31e-13!84;UBERON:0000119!1.48e-12!312;UBERON:0002049!1.62e-12!79;UBERON:0007798!1.62e-12!79;UBERON:0003914!2.25e-12!118;UBERON:0000483!5.05e-12!309;UBERON:0001637!1.20e-11!42;UBERON:0003509!1.20e-11!42;UBERON:0004572!1.20e-11!42;UBERON:0000490!3.41e-11!138;UBERON:0000468!1.74e-10!659;UBERON:0001981!3.54e-10!60;UBERON:0007500!3.54e-10!60;UBERON:0004537!3.54e-10!60;UBERON:0006965!3.54e-10!60;UBERON:0004573!3.59e-09!33;UBERON:0004571!3.59e-09!33;UBERON:0003102!6.54e-09!95;UBERON:0000055!7.07e-09!69;UBERON:0000922!2.19e-08!612;UBERON:0004535!3.86e-08!110;UBERON:0002050!4.46e-08!605;UBERON:0005423!4.46e-08!605;UBERON:0000923!5.51e-08!604;UBERON:0005291!5.51e-08!604;UBERON:0006598!5.51e-08!604;UBERON:0002532!5.51e-08!604;UBERON:0000477!8.17e-08!286;UBERON:0000467!8.52e-08!625;UBERON:0001009!1.18e-07!113;UBERON:0000480!1.43e-07!626;UBERON:0000926!2.66e-07!448;UBERON:0004120!2.66e-07!448;UBERON:0006603!2.66e-07!448;UBERON:0003103!2.69e-07!69;UBERON:0001048!6.59e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;5.61e-08;33!UBERON:0004571;5.61e-08;33!UBERON:0001637;7.59e-08;42!UBERON:0003509;7.59e-08;42!UBERON:0004572;7.59e-08;42!UBERON:0003914;4.03e-07;74 | |||
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| ||
|short_description=p2@RAB34 | |short_description=p2@RAB34 | ||
}} | }} |
Latest revision as of 07:06, 19 September 2015
Short description: | p2@RAB34 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB34_5end |
Coexpression cluster: | C3622_Mesenchymal_Alveolar_Renal_Smooth_Osteoblast_Keratocytes_Hair |
Association with transcript: | 0bp_to_ENST00000395242_5end |
EntrezGene: | RAB34 |
HGNC: | 16519 |
UniProt: | A8MYQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 2.03e-25 | 250 |
mesodermal cell | 1.39e-20 | 121 |
muscle precursor cell | 7.54e-20 | 58 |
myoblast | 7.54e-20 | 58 |
multi-potent skeletal muscle stem cell | 7.54e-20 | 58 |
muscle cell | 3.64e-19 | 55 |
electrically responsive cell | 1.11e-18 | 61 |
electrically active cell | 1.11e-18 | 61 |
fibroblast | 1.53e-17 | 76 |
smooth muscle cell | 1.24e-16 | 43 |
smooth muscle myoblast | 1.24e-16 | 43 |
vascular associated smooth muscle cell | 1.28e-14 | 32 |
epithelial cell | 1.60e-09 | 253 |
cardiocyte | 2.86e-07 | 16 |
stromal cell | 4.17e-07 | 28 |
ectodermal cell | 8.19e-07 | 72 |