FFCP PHASE1:Hg19::chr1:77759506..77759517,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26289 | |EntrezGene=26289 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=365 | |HGNC=365 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=28bp_to_ENST00000466114_5end | |association_with_transcript=28bp_to_ENST00000466114_5end | ||
|cluster_id=chr1:77759506..77759517,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_18_at_AK5_5end | |description=CAGE_peak_18_at_AK5_5end | ||
|id=chr1:77759506..77759517,+ | |id=chr1:77759506..77759517,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002771;4.32e-26;2!UBERON:0001954;7.14e-26;2!UBERON:0003022;7.14e-26;2!UBERON:0002421;7.14e-26;2!UBERON:0002600;7.14e-26;2!UBERON:0002619;3.18e-20;22!UBERON:0000956;5.19e-18;25!UBERON:0000203;5.19e-18;25!UBERON:0001893;3.95e-14;34!UBERON:0002791;3.98e-14;32!UBERON:0001869;3.98e-14;32!UBERON:0003528;1.64e-12;34!UBERON:0002020;1.64e-12;34!UBERON:0002021;3.26e-11;5!UBERON:0000349;3.26e-11;5!UBERON:0001950;1.61e-10;20!UBERON:0000200;1.22e-09;6!UBERON:0001871;1.89e-08;6!UBERON:0002780;2.68e-08;41!UBERON:0001890;2.68e-08;41 | |||
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| ||
|short_description=p18@AK5 | |short_description=p18@AK5 | ||
}} | }} |
Latest revision as of 06:57, 19 September 2015
Short description: | p18@AK5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_AK5_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | 28bp_to_ENST00000466114_5end |
EntrezGene: | AK5 |
HGNC: | 365 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 4.32e-26 | 2 |
Ammon's horn | 5.56e-26 | 2 |
lobe parts of cerebral cortex | 5.56e-26 | 2 |
hippocampal formation | 5.56e-26 | 2 |
limbic lobe | 5.56e-26 | 2 |
regional part of cerebral cortex | 2.97e-20 | 22 |
cerebral cortex | 4.90e-18 | 25 |
pallium | 4.90e-18 | 25 |
regional part of telencephalon | 2.01e-14 | 32 |
cerebral hemisphere | 2.01e-14 | 32 |
brain grey matter | 1.18e-13 | 34 |
gray matter | 1.18e-13 | 34 |
telencephalon | 1.18e-13 | 34 |
regional part of forebrain | 1.56e-11 | 41 |
forebrain | 1.56e-11 | 41 |
anterior neural tube | 1.56e-11 | 41 |
future forebrain | 1.56e-11 | 41 |
limbic system | 2.94e-11 | 5 |
occipital lobe | 3.26e-11 | 5 |
neocortex | 1.61e-10 | 20 |
gyrus | 1.22e-09 | 6 |
regional part of nervous system | 3.61e-09 | 53 |
regional part of brain | 3.61e-09 | 53 |
neural tube | 9.89e-09 | 56 |
neural rod | 9.89e-09 | 56 |
future spinal cord | 9.89e-09 | 56 |
neural keel | 9.89e-09 | 56 |
temporal lobe | 1.89e-08 | 6 |
pre-chordal neural plate | 4.28e-08 | 61 |
brain | 2.91e-07 | 68 |
future brain | 2.91e-07 | 68 |