FFCP PHASE1:Hg19::chr18:30350270..30350285,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57565 | |EntrezGene=57565 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=29266 | |HGNC=29266 | ||
|TSSclassifier=strong | |||
|UniProt=Q9P2G3 | |UniProt=Q9P2G3 | ||
|association_with_transcript=-90bp_to_AK294996_5end | |association_with_transcript=-90bp_to_AK294996_5end | ||
|cluster_id=chr18:30350270..30350285,- | |||
|coexpression_cluster_id=C112 | |coexpression_cluster_id=C112 | ||
|description=CAGE_peak_1_at_KLHL14_5end | |description=CAGE_peak_1_at_KLHL14_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000236!5.46e-20!14;CL:0000945!4.91e-14!24;CL:0000826!4.91e-14!24 | |ontology_enrichment_celltype=CL:0000236!5.46e-20!14;CL:0000945!4.91e-14!24;CL:0000826!4.91e-14!24 | ||
|ontology_enrichment_celltype_v019=CL:0000236;1.15e-53;13!CL:0000945;2.43e-34;24!CL:0000542;1.10e-13;53!CL:0000785;9.81e-09;1!CL:0000819;9.81e-09;1 | |ontology_enrichment_celltype_v019=CL:0000236;1.15e-53;13!CL:0000945;2.43e-34;24!CL:0000542;1.10e-13;53!CL:0000785;9.81e-09;1!CL:0000819;9.81e-09;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000236,9.35e-50,14;CL:0000945,2.44e-34,24;CL:0000826,2.44e-34,24;CL:0000542,2.09e-17,53;CL:0000051,2.09e-17,53;CL:0000838,8.00e-15,52;CL:0000819,1.18e-08,1;CL:0002087,8.77e-07,115 | |||
|ontology_enrichment_development_v019=CL:0000051;1.10e-13;53!UBERON:0005754;7.01e-09;1 | |ontology_enrichment_development_v019=CL:0000051;1.10e-13;53!UBERON:0005754;7.01e-09;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;9.81e-09;1!DOID:8675;9.81e-09;1!DOID:12603;9.81e-09;1 | |ontology_enrichment_disease_v019=DOID:0060073;9.81e-09;1!DOID:8675;9.81e-09;1!DOID:12603;9.81e-09;1 | ||
|ontology_enrichment_disease_v019_2=DOID:12603,9.46e-09,1;DOID:0060073,1.18e-08,1;DOID:8675,1.18e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!3.05e-14!115;UBERON:0006947!4.46e-07!3;UBERON:0004054!4.46e-07!3 | |ontology_enrichment_uberon=UBERON:0007023!3.05e-14!115;UBERON:0006947!4.46e-07!3;UBERON:0004054!4.46e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.34e-10;3!UBERON:0004054;1.34e-10;3!UBERON:0002106;3.31e-10;3!UBERON:0000998;7.01e-09;1!UBERON:0006868;7.01e-09;1!UBERON:0000029;1.53e-08;1!UBERON:0001000;2.84e-08;1!UBERON:0005352;2.84e-08;1!UBERON:0005904;3.67e-08;4 | |ontology_enrichment_uberon_v019=UBERON:0006947;1.34e-10;3!UBERON:0004054;1.34e-10;3!UBERON:0002106;3.31e-10;3!UBERON:0000998;7.01e-09;1!UBERON:0006868;7.01e-09;1!UBERON:0000029;1.53e-08;1!UBERON:0001000;2.84e-08;1!UBERON:0005352;2.84e-08;1!UBERON:0005904;3.67e-08;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.05e-10,3;UBERON:0004054,1.05e-10,3;UBERON:0002106,3.01e-10,3;UBERON:0004854,3.01e-10,3;UBERON:0009034,3.01e-10,3;UBERON:0002095,3.01e-10,3;UBERON:0004782,3.01e-10,3;UBERON:0003281,3.01e-10,3;UBERON:0009664,3.01e-10,3;UBERON:0002296,3.01e-10,3;UBERON:0005602,3.01e-10,3;UBERON:0001179,3.01e-10,3;UBERON:0006293,3.01e-10,3;UBERON:0000998,7.01e-09,1;UBERON:0006868,7.01e-09,1;UBERON:0000945,1.24e-08,8;UBERON:0010039,1.24e-08,8;UBERON:0000029,1.37e-08,1;UBERON:0001000,1.98e-08,1;UBERON:0005352,1.98e-08,1;UBERON:0005904,3.06e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,3.27683166757279,0.889509253863555,1.70692089026603,2.00197993518006,2.29900975981793,0.661044872784862,1.90810750907073,6.26134266020393,2.93618594685469,2.29363936875137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,1.0366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,3.34445715226294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,3.10173141666632,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.126621591911757,0,0,0,0,0,23.5945388101786,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01794229766841,3.62629776877132,4.31382680666783,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0.315222829196793,0.786818822024972,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0.157204305099666,0,2.48083010905975,0,2.07047417247523,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0.80057074828547,0,0,0.128458450192919,0,0,0,0.756215088665154,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.549451649953598,0,0,0,0,0,0,0,0,3.30330717374901,0,0,0,0,0,0,0,4.23387050190929,1.3746412112643,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0.235676547101626,0,0,0.8453114551668,0,1.12780701575824,1.93373663920732,0,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0.436350690340377,1.0580536810308,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0.250707539292375,0.0757786982182394,0,0.829169439458779,0,0,1.90451545170992,0.0645889098360061,0.124149428591716,0,0.318235791390825,1.0105859447911,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.488965776731466,0,0,0.805095174364105,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51992488922645,3.27683166757279,0.889509253863555,1.70692089026603,2.00197993518006,2.29900975981793,0.661044872784862,1.90810750907073,6.26134266020393,2.93618594685469,2.29363936875137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0.348581828608555,1.0366105501537,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34779121492523,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0.411362273086194,0,0,0,0,0,0,3.34445715226294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0.295547618953547,0,0,0,0.384751292518985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0,0,0,3.10173141666632,0,0,1.97292201424695,0,0,0,0,0,0,0,0,0,0,0,0.173559738335131,0,0,0.52418000472609,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.126621591911757,0,0,0,0,0,23.5945388101786,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01794229766841,3.62629776877132,4.31382680666783,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0.0607495566580247,0,0.315222829196793,0.786818822024972,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.26446520348538,0,0,0,0.157204305099666,0,2.48083010905975,0,2.07047417247523,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,1.59413131471908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0.39997479170986,0,0.172214979660816,0,0,0,0.622077260032973,0,0,0,0,0,0.212574920101683,0,0,0,0.0788617450012534,0.80057074828547,0,0,0.128458450192919,0,0,0,0.756215088665154,0.138314504928436,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.549451649953598,0,0,0,0,0,0,0,0,3.30330717374901,0,0,0,0,0,0,0,4.23387050190929,1.3746412112643,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.301925687133347,0,0,0,0,0.235676547101626,0,0,0.8453114551668,0,1.12780701575824,1.93373663920732,0,0,0,0,0.730336388246517,0,0,0,0.203974470572744,0.436350690340377,1.0580536810308,0,0,0,0,0.109265571963696,0.126698501011437,0,0,0,0.250707539292375,0.0757786982182394,0,0.829169439458779,0,0,1.90451545170992,0.0645889098360061,0.124149428591716,0,0.318235791390825,1.0105859447911,0,0,0.404112318087525,0.0717222053926763,0,0,0,0,0,0,0.488965776731466,0,0,0.805095174364105,0 | ||
|short_description=p1@KLHL14 | |short_description=p1@KLHL14 | ||
}} | }} |
Latest revision as of 06:41, 19 September 2015
Short description: | p1@KLHL14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KLHL14_5end |
Coexpression cluster: | C112_gastric_pancreas_temporal_duodenum_small_extraskeletal_adrenal |
Association with transcript: | -90bp_to_AK294996_5end |
EntrezGene: | KLHL14 |
HGNC: | 29266 |
UniProt: | Q9P2G3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 9.35e-50 | 14 |
lymphocyte of B lineage | 2.44e-34 | 24 |
pro-B cell | 2.44e-34 | 24 |
lymphocyte | 2.09e-17 | 53 |
common lymphoid progenitor | 2.09e-17 | 53 |
lymphoid lineage restricted progenitor cell | 8.00e-15 | 52 |
B-1 B cell | 1.18e-08 | 1 |
nongranular leukocyte | 8.77e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.05e-10 | 3 |
internal male genitalia | 1.05e-10 | 3 |
spleen | 3.01e-10 | 3 |
gastrointestinal system mesentery | 3.01e-10 | 3 |
stomach region | 3.01e-10 | 3 |
mesentery | 3.01e-10 | 3 |
gastrointestinal system serosa | 3.01e-10 | 3 |
mesentery of stomach | 3.01e-10 | 3 |
gut mesentery | 3.01e-10 | 3 |
dorsal mesentery | 3.01e-10 | 3 |
dorsal mesogastrium | 3.01e-10 | 3 |
peritoneal cavity | 3.01e-10 | 3 |
spleen primordium | 3.01e-10 | 3 |
seminal vesicle | 7.01e-09 | 1 |
seminal fluid secreting gland | 7.01e-09 | 1 |
stomach | 1.24e-08 | 8 |
food storage organ | 1.24e-08 | 8 |
lymph node | 1.37e-08 | 1 |
vas deferens | 1.98e-08 | 1 |
spermatic cord | 1.98e-08 | 1 |
duct of male reproductive system | 3.06e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 9.46e-09 | 1 |
lymphatic system cancer | 1.18e-08 | 1 |
lymphosarcoma | 1.18e-08 | 1 |