FFCP PHASE1:Hg19::chr18:3013243..3013260,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:3013243..3013260,- to FFCP PHASE1:Hg19::chr18:3013243..3013260,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9663 | |EntrezGene=9663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14450 | |HGNC=14450 | ||
|TSSclassifier=strong | |||
|UniProt=C9JPF4 | |UniProt=C9JPF4 | ||
|association_with_transcript=52bp_to_ENST00000455369_5end | |||
|cluster_id=chr18:3013243..3013260,- | |||
|description=CAGE_peak_5_at_LPIN2_5end | |||
|id=chr18:3013243..3013260,- | |||
|ontology_enrichment_celltype=CL:0000766!1.67e-16!76;CL:0000860!3.67e-15!45;CL:0000839!4.33e-15!70;CL:0002057!7.08e-14!42;CL:0000557!1.40e-13!71;CL:0002194!2.54e-13!63;CL:0000576!2.54e-13!63;CL:0000040!2.54e-13!63;CL:0000559!2.54e-13!63;CL:0000738!3.38e-13!140;CL:0002031!1.33e-12!124;CL:0002009!1.36e-12!65;CL:0002087!4.58e-12!119;CL:0000037!1.22e-09!172;CL:0000566!1.22e-09!172;CL:0000763!4.71e-09!112;CL:0000049!4.71e-09!112;CL:0002032!4.89e-09!165;CL:0000837!4.89e-09!165;CL:0000988!1.76e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.95e-20;33!CL:0002057;8.95e-20;33!CL:0000473;2.01e-14;39!CL:0000234;2.01e-14;39!CL:0000576;6.99e-10;48!CL:0000766;6.82e-08;69!CL:0000094;2.92e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.57e-17,42;CL:0002057,2.57e-17,42;CL:0000766,3.36e-17,72;CL:0000473,2.58e-16,48;CL:0000234,2.58e-16,48;CL:0000738,5.27e-15,136;CL:0000839,2.25e-14,66;CL:0002194,1.00e-12,59;CL:0000576,1.00e-12,59;CL:0000040,1.00e-12,59;CL:0000559,1.00e-12,59;CL:0000557,1.57e-12,67;CL:0000037,1.83e-12,168;CL:0002087,2.05e-12,115;CL:0002031,3.41e-12,120;CL:0002009,5.55e-12,61;CL:0000763,2.34e-11,108;CL:0000049,2.34e-11,108;CL:0002032,2.49e-11,161;CL:0000837,2.49e-11,161;CL:0000988,6.69e-11,177;CL:0000094,5.20e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;8.83e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.78e-15!102;UBERON:0003061!2.78e-15!102;UBERON:0002193!2.78e-13!112;UBERON:0001474!2.84e-11!86;UBERON:0002371!4.78e-11!80;UBERON:0002405!1.45e-10!115;UBERON:0004765!2.97e-09!101;UBERON:0001434!2.97e-09!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.66e-15,98;UBERON:0003061,4.66e-15,98;UBERON:0002193,1.01e-13,108;UBERON:0002371,8.19e-10,76;UBERON:0002405,2.64e-09,93;UBERON:0001474,3.39e-09,82;UBERON:0004765,1.67e-07,90;UBERON:0000178,9.08e-07,15;UBERON:0000179,9.08e-07,15;UBERON:0000463,9.08e-07,15 | |||
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|phase1_expression=0.908391896352783,0.214100523890983,0.422863212287913,1.0007329835313,0,0.872338524100369,0,0,0.261185628199839,0,0.697801167972428,0,0,0.74259811776028,0.994192127183747,0.672325146451775,0,0,0.487932798790507,0.369363174230364,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0.246301768349837,0.236132343941038,1.18009283054671,1.15148819429164,1.23852898652861,0,0,0,0.0774672005803016,0,0.880801318004542,1.66198622559563,0.601633342410425,0.868043482863407,0.447830948479849,0.647787332037959,1.03030227053675,2.18097358169347,2.26725566213286,1.94067248950253,4.88100977501938,0.822335776043652,2.47765096716083,1.1507695692886,1.2808035326455,2.12834006899727,2.41321976515633,1.29096936716765,5.41705946377367,2.07066573496865,2.18324920046277,1.57306439111559,3.06083892370903,1.28371610830437,1.91801137739712,0.659702600373432,1.19678194572979,2.13112375266347,1.45104619314292,1.13477044938228,3.11411124497787,1.7587406567972,2.08593167368081,4.56096573880745,1.21079900526674,2.57794345191295,3.16462387440884,0.845021145247767,1.27562579979026,0.209658645508376,0.44931452458598,0.450530678524519,0.803627933485401,0.285012743741249,0.59675003159727,0,0,0,0,0.426730222566507,0,0,0.661044872784862,0,0,0.587237189370939,1.14681968437569,2.64342657158052,3.92355994087075,0.263384084775077,3.93419540227666,6.28817220398664,4.72883447698871,0,0,0,0,1.00269411196656,0,0.443067789167242,0,0.640456598628376,0.390178042679635,1.97325485524411,0.276350017785848,0.869409257205157,1.4828656316206,1.33770414044857,1.04535523804977,1.35971211237079,4.21542542962113,5.49803912772208,1.51811815211702,0.95569624297229,0.651083453856419,0,2.55977702432214,1.4078527226986,3.74792179657038,0.947109008176067,0.821127996921047,2.82249440514625,2.40696176205157,1.30341963494519,0,0,0,0.361439152384566,0.50133791063589,0.869079113764942,1.5905718941022,2.43317435151318,0.472674085820339,0,0.351339142772504,1.76821751921912,0,0,0,0.174129737299267,0.26591592103773,1.43094374583205,0,1.11437250398869,0,0.860234595106124,0.347140501607594,0.56530794192401,0,1.10047216776027,0.208994966536811,0.258416759169329,1.77883131343355,0,2.01414658554573,0.760272105718513,0.732186172644509,0.735326160691737,0,0.0892997282840798,0.44905874525234,0.788280363383256,1.53316637465883,0,0,25.038279312852,11.6334079244498,0,0.496971951695318,0.25326102332916,1.45650098894541,0.286836620748814,0.354668382198357,0.560677600142307,0,0,0.622422070799533,0.538842688278752,0.163461903113459,0.151357427644931,2.30470369792,0.468642863667593,0.312160076830321,0.570471821544449,0,0.117434498643765,0,0,0.61246251376468,0.737005903870608,0.206651562351531,1.18800285728205,0.989067717114227,0,0.718618141816238,0,0.500474079487857,0.277064115484183,0,0.919463387397059,0.300476117813194,0.113432183160021,1.61450672119976,0.213557388818567,0.423863802319124,0.900273288253207,0.515262646192195,1.28820270022815,0.18611685633159,0.506328996723799,0.0974370051611986,1.51460264546469,0.184099797284599,0.484938170456436,1.42003837006646,0.302256294682921,0,0,0,0.286804595389004,0.121973706129595,0,0.116193942869518,0.10366105501537,0.252320850875628,0,1.56449532329816,0,0,0,0,0.591534000199219,0.337169380156203,0.723033089650446,0.55146986366197,0.435758888184812,0.71181185733329,0.269662616320329,0,0.38474715694639,0,0,0,0,1.26755034821831,2.94848165003288,0,0,0.860919069801795,0.857839051492628,0,0,0,0,0.325808305310325,0,0,0,0.234817388471643,0,0.462985512576611,0,0,0,0.492434012174795,0.468008530278475,0.594524649154913,0,0,0,0.179117045405697,0,0,1.47798971368783,0.352193736052904,0.829312462163088,0.432359860250884,1.38866676769018,0,0.381988425558278,1.17217447210047,0,0,0.300343057843917,0,0.336393253036082,0,0.1466765716419,1.03417372606222,0,0,0.797814349754612,0,0.257207374262142,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0.904318131178758,0,0.399891964728228,1.2162378064119,0.502257091432126,2.10833939483032,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0.784596007954691,2.56139988262505,3.23441362289276,2.05348858047597,0.508189248444927,1.30139853857622,0,0.167516265334349,0,7.49007023947182,0,4.14415513436035,0.12269149171914,0,0.271265023699736,0,0.713715955188647,0.630809660135739,0.468565659970853,0.601892199455438,2.27407504055985,0,0,0.184369168541703,0.434418072340414,0.979005787313703,0.686286847621712,1.24060815673732,1.94142780736755,2.24127871387233,0.303127571446259,0,0.604780586659361,0.992431231275107,0.61384789315225,0.841980283299221,0.384417447767103,0,0.160853921143607,0,0.462629081407967,1.06537035187876,0.246381468041427,0,0.348631135379878,0.241718899183244,0,0,0.68888668898764,0.546273504020151,0.655622074797121,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0.764628819135115,0,0,7.89335555925364,7.58162807972212,0.769350375349168,2.95213181129735,0.976135183992909,0.9273691048295,0.183138929636687,0.330037999682352,0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| ||
|short_description=p5@LPIN2 | |||
}} | }} |
Latest revision as of 06:29, 19 September 2015
Short description: | p5@LPIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LPIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 52bp_to_ENST00000455369_5end |
EntrezGene: | LPIN2 |
HGNC: | 14450 |
UniProt: | C9JPF4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.57e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.57e-17 | 42 |
myeloid leukocyte | 3.36e-17 | 72 |
defensive cell | 2.58e-16 | 48 |
phagocyte | 2.58e-16 | 48 |
leukocyte | 5.27e-15 | 136 |
myeloid lineage restricted progenitor cell | 2.25e-14 | 66 |
monopoietic cell | 1.00e-12 | 59 |
monocyte | 1.00e-12 | 59 |
monoblast | 1.00e-12 | 59 |
promonocyte | 1.00e-12 | 59 |
granulocyte monocyte progenitor cell | 1.57e-12 | 67 |
hematopoietic stem cell | 1.83e-12 | 168 |
nongranular leukocyte | 2.05e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 3.41e-12 | 120 |
macrophage dendritic cell progenitor | 5.55e-12 | 61 |
myeloid cell | 2.34e-11 | 108 |
common myeloid progenitor | 2.34e-11 | 108 |
hematopoietic oligopotent progenitor cell | 2.49e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.49e-11 | 161 |
hematopoietic cell | 6.69e-11 | 177 |
granulocyte | 5.20e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.66e-15 | 98 |
blood island | 4.66e-15 | 98 |
hemolymphoid system | 1.01e-13 | 108 |
bone marrow | 8.19e-10 | 76 |
immune system | 2.64e-09 | 93 |
bone element | 3.39e-09 | 82 |
skeletal element | 1.67e-07 | 90 |
blood | 9.08e-07 | 15 |
haemolymphatic fluid | 9.08e-07 | 15 |
organism substance | 9.08e-07 | 15 |