FFCP PHASE1:Hg19::chr2:196521845..196521869,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57181 | |EntrezGene=57181 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20861 | |HGNC=20861 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULF5,C9J0F5,F2Z341 | |UniProt=Q9ULF5,C9J0F5,F2Z341 | ||
|association_with_transcript=0bp_to_ENST00000359634,ENST00000412905,ENST00000430412,NM_020342,uc002uth.3,uc010zgp.1_5end | |association_with_transcript=0bp_to_ENST00000359634,ENST00000412905,ENST00000430412,NM_020342,uc002uth.3,uc010zgp.1_5end | ||
|cluster_id=chr2:196521845..196521869,+ | |||
|coexpression_cluster_id=C4164 | |||
|description=CAGE_peak_3_at_SLC39A10_5end | |description=CAGE_peak_3_at_SLC39A10_5end | ||
|id=chr2:196521845..196521869,+ | |id=chr2:196521845..196521869,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.39e-07!31;DOID:1240!8.54e-07!39 | |ontology_enrichment_disease=DOID:8692!2.39e-07!31;DOID:1240!8.54e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;3.32e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,5.78e-08,31;DOID:1240,2.20e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.29e-09!22;UBERON:0001869!1.77e-09!32;UBERON:0000956!2.73e-09!25;UBERON:0000203!2.73e-09!25;UBERON:0002020!2.84e-09!34;UBERON:0003528!2.84e-09!34;UBERON:0001893!7.20e-09!34;UBERON:0001950!7.92e-09!20;UBERON:0002791!2.53e-08!33;UBERON:0001017!6.80e-08!82;UBERON:0005743!1.58e-07!86;UBERON:0001737!1.90e-07!9;UBERON:0002780!2.36e-07!41;UBERON:0001890!2.36e-07!41;UBERON:0006240!2.36e-07!41;UBERON:0003080!4.82e-07!42 | |ontology_enrichment_uberon=UBERON:0002619!1.29e-09!22;UBERON:0001869!1.77e-09!32;UBERON:0000956!2.73e-09!25;UBERON:0000203!2.73e-09!25;UBERON:0002020!2.84e-09!34;UBERON:0003528!2.84e-09!34;UBERON:0001893!7.20e-09!34;UBERON:0001950!7.92e-09!20;UBERON:0002791!2.53e-08!33;UBERON:0001017!6.80e-08!82;UBERON:0005743!1.58e-07!86;UBERON:0001737!1.90e-07!9;UBERON:0002780!2.36e-07!41;UBERON:0001890!2.36e-07!41;UBERON:0006240!2.36e-07!41;UBERON:0003080!4.82e-07!42 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.28e-10;22!UBERON:0000956;2.86e-09;25!UBERON:0000203;2.86e-09;25!UBERON:0001950;4.33e-09;20!UBERON:0001869;7.87e-09;32!UBERON:0003528;1.83e-08;34!UBERON:0002020;1.83e-08;34!UBERON:0001893;2.60e-08;34!UBERON:0002791;3.59e-08;32!UBERON:0001737;5.68e-08;9!UBERON:0001557;5.68e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,3.03e-10,32;UBERON:0002619,3.73e-10,22;UBERON:0003528,5.12e-10,34;UBERON:0002020,5.12e-10,34;UBERON:0000956,8.28e-10,25;UBERON:0000203,8.28e-10,25;UBERON:0002791,2.22e-09,32;UBERON:0001950,2.60e-09,20;UBERON:0001893,2.84e-09,34;UBERON:0001017,3.52e-08,81;UBERON:0001737,7.29e-08,9;UBERON:0002780,2.36e-07,41;UBERON:0001890,2.36e-07,41;UBERON:0003080,2.36e-07,41;UBERON:0006240,2.36e-07,41;UBERON:0000955,5.09e-07,68;UBERON:0006238,5.09e-07,68;UBERON:0001049,9.61e-07,56;UBERON:0005068,9.61e-07,56;UBERON:0006241,9.61e-07,56;UBERON:0007135,9.61e-07,56 | |||
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| ||
|short_description=p3@SLC39A10 | |short_description=p3@SLC39A10 | ||
}} | }} |
Latest revision as of 06:10, 19 September 2015
Short description: | p3@SLC39A10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC39A10_5end |
Coexpression cluster: | C4164_medial_amygdala_frontal_Mast_Hep2_paracentral_parietal |
Association with transcript: | 0bp_to_ENST00000359634, ENST00000412905, ENST00000430412, NM_020342, uc002uth.3, uc010zgp.1_5end |
EntrezGene: | SLC39A10 |
HGNC: | 20861 |
UniProt: | Q9ULF5C9J0F5F2Z341 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 3.03e-10 | 32 |
regional part of cerebral cortex | 3.73e-10 | 22 |
brain grey matter | 5.12e-10 | 34 |
gray matter | 5.12e-10 | 34 |
cerebral cortex | 8.28e-10 | 25 |
pallium | 8.28e-10 | 25 |
regional part of telencephalon | 2.22e-09 | 32 |
neocortex | 2.60e-09 | 20 |
telencephalon | 2.84e-09 | 34 |
central nervous system | 3.52e-08 | 81 |
larynx | 7.29e-08 | 9 |
regional part of forebrain | 2.36e-07 | 41 |
forebrain | 2.36e-07 | 41 |
anterior neural tube | 2.36e-07 | 41 |
future forebrain | 2.36e-07 | 41 |
brain | 5.09e-07 | 68 |
future brain | 5.09e-07 | 68 |
neural tube | 9.61e-07 | 56 |
neural rod | 9.61e-07 | 56 |
future spinal cord | 9.61e-07 | 56 |
neural keel | 9.61e-07 | 56 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 5.78e-08 | 31 |
leukemia | 2.20e-07 | 39 |